RNA–Protein interactions for RNA: ENST00000591877.1

VMP1-213, Transcript of vacuole membrane protein 1, humanhuman

TSL 3

Gene VMP1, Length 791 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VMP1-213ENST00000591877 DEPDC5O75140 1603 aa11.59□□□□□ -0.55
VMP1-213ENST00000591877 DXOO77932 396 aaKnown RBP11.58□□□□□ -0.56
VMP1-213ENST00000591877 BMP1P13497 986 aa11.58□□□□□ -0.56
VMP1-213ENST00000591877 USB1Q9BQ65 265 aaKnown RBP11.58□□□□□ -0.56
VMP1-213ENST00000591877 GNL3Q9BVP2 549 aaKnown RBP eCLIP11.58□□□□□ -0.563e-6■■□□□ 12.1
VMP1-213ENST00000591877 RRP7BPQ9NSQ0 103 aa11.58□□□□□ -0.56
VMP1-213ENST00000591877 PRDM15P57071 1507 aaPredicted RBP11.58□□□□□ -0.56
VMP1-213ENST00000591877 SPATA31D1Q6ZQQ2 1576 aa11.58□□□□□ -0.56
VMP1-213ENST00000591877 POLR1AO95602 1720 aaPredicted RBP11.57□□□□□ -0.56
VMP1-213ENST00000591877 MYSM1Q5VVJ2 828 aa11.57□□□□□ -0.56
VMP1-213ENST00000591877 ERBINQ96RT1 1412 aa11.57□□□□□ -0.56
VMP1-213ENST00000591877 IRF7Q92985 503 aa11.56□□□□□ -0.56
VMP1-213ENST00000591877 NEURL4Q96JN8 1562 aa11.56□□□□□ -0.56
VMP1-213ENST00000591877 CHIC2Q9UKJ5 165 aa11.56□□□□□ -0.56
VMP1-213ENST00000591877 WNT7BP56706 349 aa11.55□□□□□ -0.56
VMP1-213ENST00000591877 TRIM46Q7Z4K8 759 aa11.55□□□□□ -0.56
VMP1-213ENST00000591877 CLUAP1Q96AJ1 413 aa11.55□□□□□ -0.56
VMP1-213ENST00000591877 ADGRL2O95490 1459 aa11.55□□□□□ -0.56
VMP1-213ENST00000591877 ERVK-7P63135 1459 aa11.55□□□□□ -0.56
VMP1-213ENST00000591877 NLRP1Q9C000 1473 aa11.55□□□□□ -0.56
VMP1-213ENST00000591877 SPDYE5A6NIY4 337 aa11.54□□□□□ -0.56
VMP1-213ENST00000591877 CLK2P49760 499 aaKnown RBP11.54□□□□□ -0.56
VMP1-213ENST00000591877 BANK1Q8NDB2 785 aa11.54□□□□□ -0.56
VMP1-213ENST00000591877 VWDEQ8N2E2 1590 aa11.54□□□□□ -0.56
VMP1-213ENST00000591877 UGGT1Q9NYU2 1555 aa11.54□□□□□ -0.56
VMP1-213ENST00000591877 ANKRD30AQ9BXX3 1397 aa11.54□□□□□ -0.56
VMP1-213ENST00000591877 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP11.54□□□□□ -0.563e-14■■□□□ 14.3
VMP1-213ENST00000591877 PROCA1Q8NCQ7 364 aaPredicted RBP11.53□□□□□ -0.56
VMP1-213ENST00000591877 HLA-CQ95604 372 aa11.53□□□□□ -0.56
VMP1-213ENST00000591877 ZNF335Q9H4Z2 1342 aaPredicted RBP11.53□□□□□ -0.56
VMP1-213ENST00000591877 ARHGAP31Q2M1Z3 1444 aa11.52□□□□□ -0.56
VMP1-213ENST00000591877 UBR1Q8IWV7 1749 aa11.52□□□□□ -0.56
VMP1-213ENST00000591877 FAM50AQ14320 339 aaKnown RBP11.52□□□□□ -0.57
VMP1-213ENST00000591877 PROSER2Q86WR7 435 aaPredicted RBP11.52□□□□□ -0.57
VMP1-213ENST00000591877 ARID3AQ99856 593 aa11.52□□□□□ -0.57
VMP1-213ENST00000591877 ERBB4Q15303 1308 aa11.52□□□□□ -0.57
VMP1-213ENST00000591877 CAPN5O15484 640 aaPredicted RBP11.51□□□□□ -0.57
VMP1-213ENST00000591877 RAD21O60216 631 aa11.51□□□□□ -0.57
VMP1-213ENST00000591877 TUSC1Q2TAM9 212 aa11.51□□□□□ -0.57
VMP1-213ENST00000591877 TBC1D2Q9BYX2 928 aa11.51□□□□□ -0.57
VMP1-213ENST00000591877 POLR3EQ9NVU0 708 aa11.51□□□□□ -0.57
VMP1-213ENST00000591877 LMTK2Q8IWU2 1503 aa11.5□□□□□ -0.57
VMP1-213ENST00000591877 H3BM21 787 aa11.5□□□□□ -0.57
VMP1-213ENST00000591877 NPAS3Q8IXF0 933 aa11.5□□□□□ -0.57
VMP1-213ENST00000591877 THEMISQ8N1K5 641 aaPredicted RBP11.5□□□□□ -0.57
VMP1-213ENST00000591877 IQSEC2Q5JU85 1478 aa11.5□□□□□ -0.57
VMP1-213ENST00000591877 CD46P15529 392 aa11.49□□□□□ -0.57
VMP1-213ENST00000591877 PPARGC1BQ86YN6 1023 aaKnown RBP11.49□□□□□ -0.57
VMP1-213ENST00000591877 MED14O60244 1454 aa11.49□□□□□ -0.57
VMP1-213ENST00000591877 KDM4AO75164 1064 aa11.48□□□□□ -0.57
VMP1-213ENST00000591877 TMEM259Q4ZIN3 620 aa11.48□□□□□ -0.57
VMP1-213ENST00000591877 PPP2R2DQ66LE6 453 aa11.48□□□□□ -0.57
VMP1-213ENST00000591877 ANKLE2Q86XL3 938 aa11.48□□□□□ -0.57
VMP1-213ENST00000591877 FNBP4Q8N3X1 1017 aaPredicted RBP11.48□□□□□ -0.57
VMP1-213ENST00000591877 WASF2Q9Y6W5 498 aa11.48□□□□□ -0.57
VMP1-213ENST00000591877 PIK3C2BO00750 1634 aa11.48□□□□□ -0.57
VMP1-213ENST00000591877 IQGAP1P46940 1657 aa11.47□□□□□ -0.57
VMP1-213ENST00000591877 SYNMO15061 1565 aa11.47□□□□□ -0.57
VMP1-213ENST00000591877 EFCAB6Q5THR3 1501 aa11.47□□□□□ -0.57
VMP1-213ENST00000591877 ANKRD50Q9ULJ7 1429 aa11.47□□□□□ -0.57
VMP1-213ENST00000591877 KANK1Q14678 1352 aa11.47□□□□□ -0.57
VMP1-213ENST00000591877 SOCS7O14512 581 aa11.47□□□□□ -0.57
VMP1-213ENST00000591877 SIAH2O43255 324 aa11.47□□□□□ -0.57
VMP1-213ENST00000591877 EHBP1Q8NDI1 1231 aa11.47□□□□□ -0.57
VMP1-213ENST00000591877 STRCP1A6NGW2 1772 aa11.46□□□□□ -0.57
VMP1-213ENST00000591877 NPHP4O75161 1426 aaPredicted RBP11.46□□□□□ -0.57
VMP1-213ENST00000591877 GJA5P36382 358 aa11.46□□□□□ -0.57
VMP1-213ENST00000591877 RFC5P40937 340 aa11.46□□□□□ -0.57
VMP1-213ENST00000591877 CCDC82Q8N4S0 544 aa11.46□□□□□ -0.57
VMP1-213ENST00000591877 UNC13BO14795 1591 aa11.45□□□□□ -0.58
VMP1-213ENST00000591877 ARHGAP23Q9P227 1491 aa11.45□□□□□ -0.58
VMP1-213ENST00000591877 PTCRAQ6ISU1 281 aaPredicted RBP11.45□□□□□ -0.58
VMP1-213ENST00000591877 SLIT1O75093 1534 aa11.45□□□□□ -0.58
VMP1-213ENST00000591877 NOS1P29475 1434 aa11.44□□□□□ -0.58
VMP1-213ENST00000591877 TET3O43151 1660 aa11.44□□□□□ -0.58
VMP1-213ENST00000591877 KDM5AP29375 1690 aaKnown RBP11.44□□□□□ -0.58
VMP1-213ENST00000591877 GUCA2AQ02747 115 aa11.44□□□□□ -0.58
VMP1-213ENST00000591877 SYMPKQ92797 1274 aaKnown RBP11.44□□□□□ -0.58
VMP1-213ENST00000591877 ZFP42Q96MM3 310 aa11.44□□□□□ -0.58
VMP1-213ENST00000591877 ROCK1Q13464 1354 aa11.43□□□□□ -0.58
VMP1-213ENST00000591877 GCC2Q8IWJ2 1684 aa11.43□□□□□ -0.58
VMP1-213ENST00000591877 JUNDP17535 347 aa11.43□□□□□ -0.58
VMP1-213ENST00000591877 LTKP29376 864 aa11.43□□□□□ -0.58
VMP1-213ENST00000591877 SUZ12Q15022 739 aaKnown RBP11.43□□□□□ -0.58
VMP1-213ENST00000591877 SPIRE2Q8WWL2 714 aa11.43□□□□□ -0.58
VMP1-213ENST00000591877 PODXL2Q9NZ53 605 aa11.43□□□□□ -0.58
VMP1-213ENST00000591877 MYO5BQ9ULV0 1848 aa11.42□□□□□ -0.58
VMP1-213ENST00000591877 CPS1P31327 1500 aa11.42□□□□□ -0.58
VMP1-213ENST00000591877 SPTLC1O15269 473 aa11.42□□□□□ -0.58
VMP1-213ENST00000591877 IDI1Q13907 227 aa11.42□□□□□ -0.58
VMP1-213ENST00000591877 RIC3Q7Z5B4 369 aa11.42□□□□□ -0.58
VMP1-213ENST00000591877 SCAF11Q99590 1463 aaKnown RBP11.42□□□□□ -0.58
VMP1-213ENST00000591877 E9PCH4 1651 aa11.42□□□□□ -0.58
VMP1-213ENST00000591877 POM121Q96HA1 1249 aa11.41□□□□□ -0.58
VMP1-213ENST00000591877 LIMD1Q9UGP4 676 aa11.41□□□□□ -0.58
VMP1-213ENST00000591877 SERPINA10Q9UK55 444 aa11.41□□□□□ -0.58
VMP1-213ENST00000591877 COG6Q9Y2V7 657 aa11.41□□□□□ -0.58
VMP1-213ENST00000591877 IQGAP3Q86VI3 1631 aa11.41□□□□□ -0.58
VMP1-213ENST00000591877 RPRD2Q5VT52 1461 aaKnown RBP11.4□□□□□ -0.58
VMP1-213ENST00000591877 ITGAEP38570 1179 aa11.4□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 138.1 ms