RNA–Protein interactions for RNA: ENST00000460925.1

SF3A3-202, Transcript of splicing factor 3a subunit 3, humanhuman

TSL 2

Gene SF3A3, Length 793 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3A3-202ENST00000460925 FAM69CQ0P6D2 419 aa7.45□□□□□ -1.22
SF3A3-202ENST00000460925 ERFEQ4G0M1 354 aa7.45□□□□□ -1.22
SF3A3-202ENST00000460925 RNF20Q5VTR2 975 aa7.45□□□□□ -1.22
SF3A3-202ENST00000460925 ESPNB1AK53 854 aa7.44□□□□□ -1.22
SF3A3-202ENST00000460925 SSFA2P28290 1259 aa7.44□□□□□ -1.22
SF3A3-202ENST00000460925 PTPN5P54829 565 aa7.44□□□□□ -1.22
SF3A3-202ENST00000460925 C4orf48Q5BLP8 95 aa7.44□□□□□ -1.22
SF3A3-202ENST00000460925 PHLDB3Q6NSJ2 640 aa7.44□□□□□ -1.22
SF3A3-202ENST00000460925 SND1Q7KZF4 910 aaKnown RBP eCLIP7.44□□□□□ -1.22
SF3A3-202ENST00000460925 TXNDC2Q86VQ3 553 aa7.44□□□□□ -1.22
SF3A3-202ENST00000460925 ANKMY2Q8IV38 441 aa7.44□□□□□ -1.22
SF3A3-202ENST00000460925 TRMT44Q8IYL2 757 aaKnown RBP7.44□□□□□ -1.22
SF3A3-202ENST00000460925 LARGE2Q8N3Y3 721 aa7.44□□□□□ -1.22
SF3A3-202ENST00000460925 FAM200AQ8TCP9 573 aa7.44□□□□□ -1.22
SF3A3-202ENST00000460925 CCDC85AQ96PX6 553 aaPredicted RBP7.44□□□□□ -1.22
SF3A3-202ENST00000460925 CDV3Q9UKY7 258 aaKnown RBP7.44□□□□□ -1.22
SF3A3-202ENST00000460925 NOD1Q9Y239 953 aa7.44□□□□□ -1.22
SF3A3-202ENST00000460925 DKK1O94907 266 aa7.43□□□□□ -1.22
SF3A3-202ENST00000460925 S1PR4O95977 384 aa7.43□□□□□ -1.22
SF3A3-202ENST00000460925 CLDN10P78369 228 aa7.43□□□□□ -1.22
SF3A3-202ENST00000460925 SWI5Q1ZZU3 235 aa7.43□□□□□ -1.22
SF3A3-202ENST00000460925 TSGA10IPQ3SY00 556 aa7.43□□□□□ -1.22
SF3A3-202ENST00000460925 SEPT12Q8IYM1 358 aa7.43□□□□□ -1.22
SF3A3-202ENST00000460925 SIX5Q8N196 739 aa7.43□□□□□ -1.22
SF3A3-202ENST00000460925 OGFOD1Q8N543 542 aa7.43□□□□□ -1.22
SF3A3-202ENST00000460925 PCDH10Q9P2E7 1040 aa7.43□□□□□ -1.22
SF3A3-202ENST00000460925 DOLKQ9UPQ8 538 aa7.43□□□□□ -1.22
SF3A3-202ENST00000460925 FCF1Q9Y324 198 aaKnown RBP7.43□□□□□ -1.22
SF3A3-202ENST00000460925 SAMD9LQ8IVG5 1584 aa7.42□□□□□ -1.22
SF3A3-202ENST00000460925 MAGEB6P1A0A0J9YX57 407 aa7.42□□□□□ -1.22
SF3A3-202ENST00000460925 GIGYF1O75420 1035 aaPredicted RBP7.42□□□□□ -1.22
SF3A3-202ENST00000460925 NBPF20Q3BBV1 942 aa7.42□□□□□ -1.22
SF3A3-202ENST00000460925 NKX2-3Q8TAU0 364 aa7.42□□□□□ -1.22
SF3A3-202ENST00000460925 FOXJ1Q92949 421 aa7.42□□□□□ -1.22
SF3A3-202ENST00000460925 CARD14Q9BXL6 1004 aa7.42□□□□□ -1.22
SF3A3-202ENST00000460925 DNAAF2Q9NVR5 837 aaKnown RBP7.42□□□□□ -1.22
SF3A3-202ENST00000460925 SLAIN2Q9P270 581 aa7.42□□□□□ -1.22
SF3A3-202ENST00000460925 CDK11AQ9UQ88 783 aaPredicted RBP7.42□□□□□ -1.22
SF3A3-202ENST00000460925 ARHGAP5Q13017 1502 aa7.42□□□□□ -1.22
SF3A3-202ENST00000460925 GPATCH8Q9UKJ3 1502 aaKnown RBP7.42□□□□□ -1.22
SF3A3-202ENST00000460925 GLI2P10070 1586 aa7.42□□□□□ -1.22
SF3A3-202ENST00000460925 PTPN23Q9H3S7 1636 aa7.41□□□□□ -1.22
SF3A3-202ENST00000460925 ZBTB7BO15156 539 aaPredicted RBP7.41□□□□□ -1.22
SF3A3-202ENST00000460925 DPYDQ12882 1025 aa7.41□□□□□ -1.22
SF3A3-202ENST00000460925 CCER1Q8TC90 406 aaPredicted RBP7.41□□□□□ -1.22
SF3A3-202ENST00000460925 SLC10A4Q96EP9 437 aa7.41□□□□□ -1.22
SF3A3-202ENST00000460925 MTMR7Q9Y216 660 aa7.41□□□□□ -1.22
SF3A3-202ENST00000460925 CCNB3Q8WWL7 1395 aa7.41□□□□□ -1.22
SF3A3-202ENST00000460925 MYOM3Q5VTT5 1437 aa7.41□□□□□ -1.22
SF3A3-202ENST00000460925 ARID4AP29374 1257 aaPredicted RBP7.4□□□□□ -1.22
SF3A3-202ENST00000460925 SH3BP2P78314 561 aa7.4□□□□□ -1.22
SF3A3-202ENST00000460925 AGERQ15109 404 aa7.4□□□□□ -1.22
SF3A3-202ENST00000460925 LINC01559Q495D7 138 aa7.4□□□□□ -1.22
SF3A3-202ENST00000460925 C1orf216Q8TAB5 229 aa7.4□□□□□ -1.22
SF3A3-202ENST00000460925 SIRT1Q96EB6 747 aa7.4□□□□□ -1.22
SF3A3-202ENST00000460925 ZNF644Q9H582 1327 aaPredicted RBP7.4□□□□□ -1.22
SF3A3-202ENST00000460925 FGD6Q6ZV73 1430 aa7.4□□□□□ -1.22
SF3A3-202ENST00000460925 CAMSAP2Q08AD1 1489 aa7.4□□□□□ -1.22
SF3A3-202ENST00000460925 SYCP2Q9BX26 1530 aa7.4□□□□□ -1.22
SF3A3-202ENST00000460925 CD109Q6YHK3 1445 aa7.39□□□□□ -1.23
SF3A3-202ENST00000460925 ITGBL1O95965 494 aaPredicted RBP7.39□□□□□ -1.23
SF3A3-202ENST00000460925 GTF2IP78347 998 aa7.39□□□□□ -1.23
SF3A3-202ENST00000460925 CROCC2H7BZ55 1655 aa7.38□□□□□ -1.23
SF3A3-202ENST00000460925 ABCC1P33527 1531 aa7.38□□□□□ -1.23
SF3A3-202ENST00000460925 FANCAO15360 1455 aa7.38□□□□□ -1.23
SF3A3-202ENST00000460925 USP4Q13107 963 aa7.38□□□□□ -1.23
SF3A3-202ENST00000460925 CCDC27Q2M243 656 aa7.38□□□□□ -1.23
SF3A3-202ENST00000460925 CDAN1Q8IWY9 1227 aa7.38□□□□□ -1.23
SF3A3-202ENST00000460925 KIAA1024Q9UPX6 916 aa7.38□□□□□ -1.23
SF3A3-202ENST00000460925 MAP4K5Q9Y4K4 846 aa7.38□□□□□ -1.23
SF3A3-202ENST00000460925 PCDHGA11Q9Y5H2 935 aa7.38□□□□□ -1.23
SF3A3-202ENST00000460925 CFAP74Q9C0B2 1584 aa7.37□□□□□ -1.23
SF3A3-202ENST00000460925 PLCH2O75038 1416 aa7.37□□□□□ -1.23
SF3A3-202ENST00000460925 SEC13P55735 322 aa7.37□□□□□ -1.23
SF3A3-202ENST00000460925 WNT7BP56706 349 aa7.37□□□□□ -1.23
SF3A3-202ENST00000460925 OXLD1Q5BKU9 147 aa7.37□□□□□ -1.23
SF3A3-202ENST00000460925 ANKLE1Q8NAG6 615 aa7.37□□□□□ -1.23
SF3A3-202ENST00000460925 ZNF594Q96JF6 807 aaPredicted RBP7.37□□□□□ -1.23
SF3A3-202ENST00000460925 FRMPD1Q5SYB0 1578 aa7.37□□□□□ -1.23
SF3A3-202ENST00000460925 ARHGEF12Q9NZN5 1544 aa7.37□□□□□ -1.23
SF3A3-202ENST00000460925 RRBP1Q9P2E9 1410 aaKnown RBP7.36□□□□□ -1.23
SF3A3-202ENST00000460925 ATP2B4P23634 1241 aa7.36□□□□□ -1.23
SF3A3-202ENST00000460925 VARSP26640 1264 aaKnown RBP7.36□□□□□ -1.23
SF3A3-202ENST00000460925 KCNC4Q03721 635 aa7.36□□□□□ -1.23
SF3A3-202ENST00000460925 TRIM32Q13049 653 aa7.36□□□□□ -1.23
SF3A3-202ENST00000460925 FAM50AQ14320 339 aaKnown RBP7.36□□□□□ -1.23
SF3A3-202ENST00000460925 CCDC102BQ68D86 513 aa7.36□□□□□ -1.23
SF3A3-202ENST00000460925 CFDP1Q9UEE9 299 aaPredicted RBP7.36□□□□□ -1.23
SF3A3-202ENST00000460925 AMOTL2Q9Y2J4 779 aa7.36□□□□□ -1.23
SF3A3-202ENST00000460925 ARAP3Q8WWN8 1544 aa7.36□□□□□ -1.23
SF3A3-202ENST00000460925 TCOF1Q13428 1488 aaKnown RBP7.36□□□□□ -1.23
SF3A3-202ENST00000460925 RICTORQ6R327 1708 aa7.35□□□□□ -1.23
SF3A3-202ENST00000460925 DNMT1P26358 1616 aaKnown RBP7.35□□□□□ -1.23
SF3A3-202ENST00000460925 RNF223E7ERA6 249 aa7.35□□□□□ -1.23
SF3A3-202ENST00000460925 M0R2N6 131 aa7.35□□□□□ -1.23
SF3A3-202ENST00000460925 ITGAEP38570 1179 aa7.35□□□□□ -1.23
SF3A3-202ENST00000460925 PCDHB11Q9Y5F2 797 aa7.35□□□□□ -1.23
SF3A3-202ENST00000460925 ADGRL1O94910 1474 aa7.35□□□□□ -1.23
SF3A3-202ENST00000460925 TRAPPC8Q9Y2L5 1435 aa7.35□□□□□ -1.23
SF3A3-202ENST00000460925 ZBTB24O43167 697 aaPredicted RBP7.34□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 57.6 ms