Protein–RNA interactions for Protein: P07988

SFTPB, Pulmonary surfactant-associated protein B, humanhuman

Predictions only

Length 381 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SFTPBP07988 HOTAIRM1-203ENST00000429611 722 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
SFTPBP07988 FAM131A-208ENST00000453072 1038 ntTSL 2 BASIC16.47■□□□□ 0.23
SFTPBP07988 SPDYE2B-202ENST00000455020 1219 ntAPPRIS ALT2 TSL 1 (best) BASIC16.47■□□□□ 0.23
SFTPBP07988 ZNF529-AS1-202ENST00000475219 1033 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
SFTPBP07988 AC073111.3-201ENST00000478789 635 ntAPPRIS P1 TSL 3 BASIC16.47■□□□□ 0.23
SFTPBP07988 THEM4-205ENST00000489410 643 ntTSL 2 BASIC16.47■□□□□ 0.23
SFTPBP07988 CDK18-217ENST00000506784 2143 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
SFTPBP07988 JPT2-204ENST00000561516 1065 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
SFTPBP07988 DEDD2-205ENST00000596251 1183 ntAPPRIS P3 TSL 1 (best) BASIC16.47■□□□□ 0.23
SFTPBP07988 SLC35E4-201ENST00000343605 2714 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
SFTPBP07988 B3GALNT2-201ENST00000313984 1874 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
SFTPBP07988 ST3GAL3-201ENST00000262915 2470 ntTSL 5 BASIC16.47■□□□□ 0.23
SFTPBP07988 PTPDC1-202ENST00000375360 4517 ntAPPRIS ALT2 TSL 1 (best) BASIC16.47■□□□□ 0.23
SFTPBP07988 AC013268.5-201ENST00000454928 1959 ntTSL 2 BASIC16.47■□□□□ 0.23
SFTPBP07988 UMOD-202ENST00000396134 2408 ntAPPRIS ALT2 TSL 2 BASIC16.47■□□□□ 0.23
SFTPBP07988 KLF3-201ENST00000261438 5122 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
SFTPBP07988 NRXN1-209ENST00000405581 5078 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
SFTPBP07988 TSPAN3-210ENST00000561277 1592 ntTSL 5 BASIC16.47■□□□□ 0.23
SFTPBP07988 ZNF865-201ENST00000568956 4005 ntAPPRIS P1 TSL 2 BASIC16.47■□□□□ 0.23
SFTPBP07988 TIMP4-201ENST00000287814 1650 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
SFTPBP07988 SCARB2-201ENST00000264896 4792 ntAPPRIS P2 TSL 1 (best) BASIC16.46■□□□□ 0.23
SFTPBP07988 ADPGK-201ENST00000311669 2557 ntAPPRIS P1 TSL 2 BASIC16.46■□□□□ 0.23
SFTPBP07988 PNCK-201ENST00000340888 1508 ntAPPRIS P1 TSL 5 BASIC16.46■□□□□ 0.23
SFTPBP07988 ANKRD65-201ENST00000427211 1976 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
SFTPBP07988 CCNJL-203ENST00000393977 3320 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
SFTPBP07988 FBXL12-205ENST00000586651 1736 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
SFTPBP07988 COL4A3BP-201ENST00000261415 2262 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
SFTPBP07988 HCCS-201ENST00000321143 2277 ntAPPRIS P1 TSL 2 BASIC16.46■□□□□ 0.23
SFTPBP07988 AL049812.1-201ENST00000432563 2267 ntBASIC16.46■□□□□ 0.23
SFTPBP07988 FBXL16-203ENST00000562563 2257 ntTSL 2 BASIC16.46■□□□□ 0.23
SFTPBP07988 MTHFD1L-201ENST00000367307 1049 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
SFTPBP07988 LINC00708-201ENST00000428165 916 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
SFTPBP07988 ABHD17AP6-201ENST00000458502 1044 ntBASIC16.46■□□□□ 0.23
SFTPBP07988 AC093827.2-201ENST00000512654 315 ntBASIC16.46■□□□□ 0.23
SFTPBP07988 C1QBPP2-201ENST00000528754 825 ntBASIC16.46■□□□□ 0.23
SFTPBP07988 LINC01301-204ENST00000530725 577 ntTSL 4 BASIC16.46■□□□□ 0.23
SFTPBP07988 CLN6-206ENST00000565471 1075 ntTSL 2 BASIC16.46■□□□□ 0.23
SFTPBP07988 AC120498.8-201ENST00000614275 531 ntBASIC16.46■□□□□ 0.23
SFTPBP07988 AC141586.3-201ENST00000562166 1838 ntBASIC16.46■□□□□ 0.23
SFTPBP07988 GATAD2A-202ENST00000360315 5671 ntAPPRIS P3 TSL 5 BASIC16.46■□□□□ 0.23
SFTPBP07988 RABEPK-204ENST00000394125 1466 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
SFTPBP07988 DMKN-207ENST00000419602 1496 ntAPPRIS ALT2 TSL 1 (best) BASIC16.46■□□□□ 0.23
SFTPBP07988 C19orf25-206ENST00000588849 1472 ntTSL 5 BASIC16.46■□□□□ 0.23
SFTPBP07988 SNX19-209ENST00000530356 1562 ntTSL 2 BASIC16.46■□□□□ 0.23
SFTPBP07988 ACBD4-207ENST00000586346 1579 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
SFTPBP07988 CD55-201ENST00000314754 2220 ntAPPRIS ALT2 TSL 1 (best) BASIC16.46■□□□□ 0.23
SFTPBP07988 RFTN1-201ENST00000334133 2982 ntAPPRIS P2 TSL 1 (best) BASIC16.46■□□□□ 0.23
SFTPBP07988 LRP3-201ENST00000253193 3807 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
SFTPBP07988 PPRC1-201ENST00000278070 5330 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.22
SFTPBP07988 PAOX-201ENST00000278060 1858 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.22
SFTPBP07988 ANGPTL4-201ENST00000301455 1879 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.22
SFTPBP07988 MSLN-202ENST00000545450 2162 ntAPPRIS ALT2 TSL 1 (best) BASIC16.45■□□□□ 0.22
SFTPBP07988 AC005082.1-201ENST00000413042 2259 ntBASIC16.45■□□□□ 0.22
SFTPBP07988 LENG8-202ENST00000376514 5146 ntAPPRIS ALT2 TSL 5 BASIC16.45■□□□□ 0.22
SFTPBP07988 ABCB9-202ENST00000344275 2394 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
SFTPBP07988 GDF10-201ENST00000580279 2458 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
SFTPBP07988 UBE2E1-201ENST00000306627 1511 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
SFTPBP07988 NTMT1-210ENST00000613644 1501 ntAPPRIS P1 TSL 3 BASIC16.45■□□□□ 0.22
SFTPBP07988 PHLDB3-201ENST00000292140 2591 ntAPPRIS P1 TSL 5 BASIC16.45■□□□□ 0.22
SFTPBP07988 GPD2-201ENST00000310454 6041 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
SFTPBP07988 LUC7L2-210ENST00000619796 2783 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
SFTPBP07988 ABHD14A-ACY1-202ENST00000463937 1705 ntAPPRIS ALT2 TSL 5 BASIC16.45■□□□□ 0.22
SFTPBP07988 UPP1-201ENST00000331803 1932 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
SFTPBP07988 PGAP3-206ENST00000579146 2220 ntTSL 2 BASIC16.45■□□□□ 0.22
SFTPBP07988 MTSS1L-204ENST00000616026 2241 ntAPPRIS ALT2 TSL 5 BASIC16.45■□□□□ 0.22
SFTPBP07988 ABHD14A-201ENST00000273596 1062 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
SFTPBP07988 H3F3A-204ENST00000366816 799 ntAPPRIS P1 TSL 3 BASIC16.45■□□□□ 0.22
SFTPBP07988 MTFP1-203ENST00000407550 912 ntTSL 2 BASIC16.45■□□□□ 0.22
SFTPBP07988 NT5C3B-203ENST00000435506 975 ntAPPRIS P1 TSL 5 BASIC16.45■□□□□ 0.22
SFTPBP07988 YBX1P10-201ENST00000444752 975 ntBASIC16.45■□□□□ 0.22
SFTPBP07988 FAM163B-202ENST00000496132 811 ntAPPRIS P1 TSL 3 BASIC16.45■□□□□ 0.22
SFTPBP07988 PNN-205ENST00000556530 601 ntTSL 2 BASIC16.45■□□□□ 0.22
SFTPBP07988 ANAPC11-223ENST00000612413 964 ntTSL 3 BASIC16.45■□□□□ 0.22
SFTPBP07988 AL359736.2-201ENST00000621992 437 ntBASIC16.45■□□□□ 0.22
SFTPBP07988 NOMO3-201ENST00000263012 3911 ntAPPRIS ALT2 TSL 1 (best) BASIC16.45■□□□□ 0.22
SFTPBP07988 MAP2K2-202ENST00000394867 1471 ntTSL 5 BASIC16.45■□□□□ 0.22
SFTPBP07988 HOXB2-201ENST00000330070 1562 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
SFTPBP07988 LMNB1-202ENST00000395354 1572 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
SFTPBP07988 ZNF843-203ENST00000618063 1765 ntAPPRIS P2 TSL 1 (best) BASIC16.45■□□□□ 0.22
SFTPBP07988 PLCXD1-202ENST00000381663 1863 ntAPPRIS P2 TSL 5 BASIC16.45■□□□□ 0.22
SFTPBP07988 NAPRT-203ENST00000435154 1877 ntTSL 2 BASIC16.45■□□□□ 0.22
SFTPBP07988 CWH43-201ENST00000226432 2472 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
SFTPBP07988 PDP1-208ENST00000520728 2554 ntAPPRIS P3 TSL 1 (best) BASIC16.45■□□□□ 0.22
SFTPBP07988 MEN1-201ENST00000312049 2761 ntAPPRIS ALT1 TSL 1 (best) BASIC16.45■□□□□ 0.22
SFTPBP07988 RAB4A-205ENST00000618010 2799 ntTSL 3 BASIC16.45■□□□□ 0.22
SFTPBP07988 ASCC2-202ENST00000397771 2823 ntAPPRIS P1 TSL 5 BASIC16.45■□□□□ 0.22
SFTPBP07988 SYNDIG1L-201ENST00000331628 2607 ntAPPRIS P1 TSL 5 BASIC16.45■□□□□ 0.22
SFTPBP07988 C2orf81-201ENST00000290390 2227 ntAPPRIS P5 TSL 5 BASIC16.45■□□□□ 0.22
SFTPBP07988 LRRC27-203ENST00000368613 2113 ntAPPRIS P3 TSL 1 (best) BASIC16.45■□□□□ 0.22
SFTPBP07988 POLR1D-203ENST00000399697 2036 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
SFTPBP07988 MMP28-204ENST00000615136 2033 ntAPPRIS ALT2 TSL 1 (best) BASIC16.45■□□□□ 0.22
SFTPBP07988 HCK-206ENST00000518730 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC16.45■□□□□ 0.22
SFTPBP07988 ART5-203ENST00000397068 1504 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
SFTPBP07988 CDKN2B-AS1-217ENST00000585267 1337 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
SFTPBP07988 LRRC29-209ENST00000629962 1303 ntAPPRIS P1 TSL 5 BASIC16.45■□□□□ 0.22
SFTPBP07988 LZTS2-202ENST00000370223 2883 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
SFTPBP07988 AAED1-201ENST00000375234 2863 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
SFTPBP07988 GLCCI1-201ENST00000223145 4743 ntAPPRIS P2 TSL 1 (best) BASIC16.44■□□□□ 0.22
SFTPBP07988 OTOP3-201ENST00000328801 2363 ntAPPRIS P1 TSL 2 BASIC16.44■□□□□ 0.22
SFTPBP07988 ALDH1A3-201ENST00000329841 3924 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Retrieved 100 of 98,524 protein–RNA pairs in 24.1 ms