RNA–Protein interactions for RNA: ENST00000310454.10

GPD2-201, Transcript of glycerol-3-phosphate dehydrogenase 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GPD2, Length 6,041 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPD2-201ENST00000310454 DCAF8L2P0C7V8 631 aa28.27■■■□□ 2.12
GPD2-201ENST00000310454 PELP1Q8IZL8 1130 aaKnown RBP27.53■■■□□ 2
GPD2-201ENST00000310454 SUPT5HO00267 1087 aaKnown RBP26.99■■□□□ 1.91
GPD2-201ENST00000310454 EHMT2Q96KQ7 1210 aa26.7■■□□□ 1.87
GPD2-201ENST00000310454 ERICH6Q7L0X2 663 aa26.58■■□□□ 1.85
GPD2-201ENST00000310454 APLP2Q06481 763 aa26.31■■□□□ 1.8
GPD2-201ENST00000310454 CCER1Q8TC90 406 aaPredicted RBP26.27■■□□□ 1.8
GPD2-201ENST00000310454 SHROOM4Q9ULL8 1493 aa26.15■■□□□ 1.78
GPD2-201ENST00000310454 CENPBP07199 599 aaPredicted RBP26.05■■□□□ 1.76
GPD2-201ENST00000310454 TTBK1Q5TCY1 1321 aaPredicted RBP25.91■■□□□ 1.74
GPD2-201ENST00000310454 MYT1Q01538 1121 aa25.86■■□□□ 1.73
GPD2-201ENST00000310454 PCGF6Q9BYE7 350 aa25.78■■□□□ 1.72
GPD2-201ENST00000310454 FAM9AQ8IZU1 332 aaPredicted RBP25.75■■□□□ 1.71
GPD2-201ENST00000310454 NEFLP07196 543 aa25.62■■□□□ 1.69
GPD2-201ENST00000310454 ZEB1P37275 1124 aaPredicted RBP25.57■■□□□ 1.68
GPD2-201ENST00000310454 YTHDC1Q96MU7 727 aaKnown RBP25.46■■□□□ 1.67
GPD2-201ENST00000310454 RANGAP1P46060 587 aaPredicted RBP25.38■■□□□ 1.65
GPD2-201ENST00000310454 ATP1B4Q9UN42 357 aaPredicted RBP25.25■■□□□ 1.63
GPD2-201ENST00000310454 DAXXQ9UER7 740 aaPredicted RBP25.18■■□□□ 1.62
GPD2-201ENST00000310454 NISCHQ9Y2I1 1504 aa24.94■■□□□ 1.58
GPD2-201ENST00000310454 TRIM41Q8WV44 630 aa24.9■■□□□ 1.58
GPD2-201ENST00000310454 UBTFP17480 764 aaKnown RBP24.84■■□□□ 1.57
GPD2-201ENST00000310454 POLR3GLQ9BT43 218 aa24.65■■□□□ 1.54
GPD2-201ENST00000310454 RTL5Q5HYW3 569 aaPredicted RBP24.6■■□□□ 1.53
GPD2-201ENST00000310454 PPARGC1BQ86YN6 1023 aaKnown RBP24.59■■□□□ 1.53
GPD2-201ENST00000310454 ZNF316A6NFI3 1004 aaPredicted RBP24.58■■□□□ 1.52
GPD2-201ENST00000310454 CNGB1Q14028 1251 aaPredicted RBP24.42■■□□□ 1.5
GPD2-201ENST00000310454 TRIM26Q12899 539 aaPredicted RBP24.4■■□□□ 1.5
GPD2-201ENST00000310454 HRCP23327 699 aa24.4■■□□□ 1.5
GPD2-201ENST00000310454 CLSPNQ9HAW4 1339 aa24.37■■□□□ 1.49
GPD2-201ENST00000310454 MYT1LQ9UL68 1186 aa24.37■■□□□ 1.49
GPD2-201ENST00000310454 ITGAEP38570 1179 aa24.34■■□□□ 1.49
GPD2-201ENST00000310454 SLC4A1APQ9BWU0 796 aaKnown RBP24.21■■□□□ 1.47
GPD2-201ENST00000310454 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP24.16■■□□□ 1.46
GPD2-201ENST00000310454 HNRNPUL2Q1KMD3 747 aaKnown RBP24.16■■□□□ 1.46
GPD2-201ENST00000310454 CHIC1Q5VXU3 224 aa24.06■■□□□ 1.44
GPD2-201ENST00000310454 DIEXFQ68CQ4 756 aaKnown RBP23.94■■□□□ 1.42
GPD2-201ENST00000310454 BCANQ96GW7 911 aa23.92■■□□□ 1.42
GPD2-201ENST00000310454 CDK11AQ9UQ88 783 aaPredicted RBP23.83■■□□□ 1.41
GPD2-201ENST00000310454 ZBTB47Q9UFB7 747 aaPredicted RBP23.81■■□□□ 1.4
GPD2-201ENST00000310454 GTF3C3Q9Y5Q9 886 aa23.71■■□□□ 1.39
GPD2-201ENST00000310454 LOC105371045A0A1W2PR82 267 aa23.68■■□□□ 1.38
GPD2-201ENST00000310454 BCL11AQ9H165 835 aa23.61■■□□□ 1.37
GPD2-201ENST00000310454 CANXP27824 592 aaKnown RBP23.58■■□□□ 1.37
GPD2-201ENST00000310454 TRIM52Q96A61 297 aa23.58■■□□□ 1.36
GPD2-201ENST00000310454 FAM50AQ14320 339 aaKnown RBP23.57■■□□□ 1.36
GPD2-201ENST00000310454 ANP32CO43423 234 aa23.56■■□□□ 1.36
GPD2-201ENST00000310454 EIF5BO60841 1220 aaKnown RBP23.56■■□□□ 1.36
GPD2-201ENST00000310454 NEUROD1Q13562 356 aa23.56■■□□□ 1.36
GPD2-201ENST00000310454 ANP32AP39687 249 aaKnown RBP23.51■■□□□ 1.35
GPD2-201ENST00000310454 SLC24A1O60721 1099 aa23.5■■□□□ 1.35
GPD2-201ENST00000310454 ZNF326Q5BKZ1 582 aaKnown RBP23.42■■□□□ 1.34
GPD2-201ENST00000310454 NPM2Q86SE8 214 aaKnown RBP23.42■■□□□ 1.34
GPD2-201ENST00000310454 ANP32BQ92688 251 aaKnown RBP23.42■■□□□ 1.34
GPD2-201ENST00000310454 GLIPR1L2Q4G1C9 344 aa23.37■■□□□ 1.33
GPD2-201ENST00000310454 NEFMP07197 916 aa23.28■■□□□ 1.32
GPD2-201ENST00000310454 HSP90AA1P07900 732 aaKnown RBP23.2■■□□□ 1.3
GPD2-201ENST00000310454 ACIN1Q9UKV3 1341 aaKnown RBP23.16■■□□□ 1.3
GPD2-201ENST00000310454 UPF2Q9HAU5 1272 aaKnown RBP23.05■■□□□ 1.28
GPD2-201ENST00000310454 FKBP8Q14318 412 aa23.01■■□□□ 1.27
GPD2-201ENST00000310454 NBR1Q14596 966 aa22.97■■□□□ 1.27
GPD2-201ENST00000310454 ARXQ96QS3 562 aa22.96■■□□□ 1.27
GPD2-201ENST00000310454 CDK11BP21127 795 aaKnown RBP22.77■■□□□ 1.24
GPD2-201ENST00000310454 HNRNPUQ00839 825 aaKnown RBP eCLIP22.75■■□□□ 1.23
GPD2-201ENST00000310454 FAM9BQ8IZU0 186 aa22.72■■□□□ 1.23
GPD2-201ENST00000310454 CCDC136Q96JN2 1154 aa22.7■■□□□ 1.23
GPD2-201ENST00000310454 GOLGA6L2Q8N9W4 650 aaPredicted RBP22.68■■□□□ 1.22
GPD2-201ENST00000310454 SALL2Q9Y467 1007 aaPredicted RBP22.68■■□□□ 1.22
GPD2-201ENST00000310454 FBLN2P98095 1184 aa22.67■■□□□ 1.22
GPD2-201ENST00000310454 ARID3CA6NKF2 412 aa22.63■■□□□ 1.21
GPD2-201ENST00000310454 ZNF777Q9ULD5 760 aaPredicted RBP22.62■■□□□ 1.21
GPD2-201ENST00000310454 TRIM44Q96DX7 344 aaPredicted RBP22.59■■□□□ 1.21
GPD2-201ENST00000310454 TNNT2P45379 298 aaPredicted RBP22.59■■□□□ 1.21
GPD2-201ENST00000310454 P3H3Q8IVL6 736 aa22.56■■□□□ 1.2
GPD2-201ENST00000310454 TONSLQ96HA7 1378 aa22.55■■□□□ 1.2
GPD2-201ENST00000310454 CHGAP10645 457 aaKnown RBP22.52■■□□□ 1.2
GPD2-201ENST00000310454 NCLP19338 710 aaKnown RBP22.52■■□□□ 1.2
GPD2-201ENST00000310454 DDX10Q13206 875 aaKnown RBP22.52■■□□□ 1.2
GPD2-201ENST00000310454 STAG3Q9UJ98 1225 aa22.5■■□□□ 1.19
GPD2-201ENST00000310454 WDR43Q15061 677 aaKnown RBP eCLIP22.49■■□□□ 1.19
GPD2-201ENST00000310454 MYH16Q9H6N6 1097 aa22.49■■□□□ 1.19
GPD2-201ENST00000310454 TMC1Q8TDI8 760 aa22.48■■□□□ 1.19
GPD2-201ENST00000310454 ESF1Q9H501 851 aaKnown RBP22.48■■□□□ 1.19
GPD2-201ENST00000310454 DDRGK1Q96HY6 314 aa22.47■■□□□ 1.19
GPD2-201ENST00000310454 BECN1Q14457 450 aa22.45■■□□□ 1.19
GPD2-201ENST00000310454 IRX6P78412 446 aaPredicted RBP22.44■■□□□ 1.18
GPD2-201ENST00000310454 ANP32EQ9BTT0 268 aa22.41■■□□□ 1.18
GPD2-201ENST00000310454 PTMAP06454 111 aaKnown RBP22.41■■□□□ 1.18
GPD2-201ENST00000310454 GOLGA6L22H0YM25 854 aa22.4■■□□□ 1.18
GPD2-201ENST00000310454 DNTTIP2Q5QJE6 756 aaKnown RBP22.37■■□□□ 1.17
GPD2-201ENST00000310454 PLPPR3Q6T4P5 718 aa22.36■■□□□ 1.17
GPD2-201ENST00000310454 MRS2Q9HD23 443 aa22.34■■□□□ 1.17
GPD2-201ENST00000310454 ZRSR1Q15695 479 aaKnown RBP22.32■■□□□ 1.16
GPD2-201ENST00000310454 NAP1L5Q96NT1 182 aaPredicted RBP22.31■■□□□ 1.16
GPD2-201ENST00000310454 TPRNQ4KMQ1 711 aa22.27■■□□□ 1.16
GPD2-201ENST00000310454 PABPN1Q86U42 306 aaKnown RBP eCLIP22.27■■□□□ 1.16
GPD2-201ENST00000310454 SCAF1Q9H7N4 1312 aaKnown RBP22.24■■□□□ 1.15
GPD2-201ENST00000310454 A0A0G2JS52 829 aa22.22■■□□□ 1.15
GPD2-201ENST00000310454 ERICH6BQ5W0A0 696 aa22.21■■□□□ 1.15
GPD2-201ENST00000310454 TULP1O00294 542 aaPredicted RBP22.19■■□□□ 1.14
Retrieved 100 of 20,778 RNA–protein pairs in 12.8 ms