RNA–Protein interactions for RNA: ENST00000312049.10

MEN1-201, Transcript of menin 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene MEN1, Length 2,761 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MEN1-201ENST00000312049 NISCHQ9Y2I1 1504 aa40.6■■■■■ 4.09
MEN1-201ENST00000312049 CCDC180Q9P1Z9 1646 aa34.92■■■■□ 3.18
MEN1-201ENST00000312049 ZCCHC6Q5VYS8 1495 aaKnown RBP34.18■■■■□ 3.06
MEN1-201ENST00000312049 SHROOM4Q9ULL8 1493 aa34.02■■■■□ 3.04
MEN1-201ENST00000312049 DCAF8L2P0C7V8 631 aa33.9■■■■□ 3.02
MEN1-201ENST00000312049 DCAF1Q9Y4B6 1507 aa33.27■■■□□ 2.92
MEN1-201ENST00000312049 ABCC9O60706 1549 aa33.18■■■□□ 2.9
MEN1-201ENST00000312049 SUPT5HO00267 1087 aaKnown RBP33.01■■■□□ 2.88
MEN1-201ENST00000312049 SCRIBQ14160 1630 aa32.65■■■□□ 2.82
MEN1-201ENST00000312049 MYO15BQ96JP2 1530 aa32.62■■■□□ 2.81
MEN1-201ENST00000312049 NACADO15069 1562 aa32.47■■■□□ 2.79
MEN1-201ENST00000312049 RB1CC1Q8TDY2 1594 aa32.15■■■□□ 2.74
MEN1-201ENST00000312049 CHIC1Q5VXU3 224 aa31.99■■■□□ 2.71
MEN1-201ENST00000312049 CECR2Q9BXF3 1484 aa31.8■■■□□ 2.68
MEN1-201ENST00000312049 RSF1Q96T23 1441 aaPredicted RBP31.79■■■□□ 2.68
MEN1-201ENST00000312049 UNC13AQ9UPW8 1703 aa31.77■■■□□ 2.68
MEN1-201ENST00000312049 MROH2BQ7Z745 1585 aa31.57■■■□□ 2.64
MEN1-201ENST00000312049 PABPN1Q86U42 306 aaKnown RBP eCLIP31.55■■■□□ 2.64
MEN1-201ENST00000312049 BICRAQ9NZM4 1560 aa31.4■■■□□ 2.62
MEN1-201ENST00000312049 WIZO95785 1651 aa31.36■■■□□ 2.61
MEN1-201ENST00000312049 BAZ1AQ9NRL2 1556 aaPredicted RBP31.22■■■□□ 2.59
MEN1-201ENST00000312049 SMARCA4P51532 1647 aa31.13■■■□□ 2.57
MEN1-201ENST00000312049 LOC105371045A0A1W2PR82 267 aa31.11■■■□□ 2.57
MEN1-201ENST00000312049 PCGF6Q9BYE7 350 aa30.92■■■□□ 2.54
MEN1-201ENST00000312049 TOP2AP11388 1531 aaKnown RBP30.8■■■□□ 2.52
MEN1-201ENST00000312049 HRCP23327 699 aa30.76■■■□□ 2.51
MEN1-201ENST00000312049 TRIM41Q8WV44 630 aa30.72■■■□□ 2.51
MEN1-201ENST00000312049 CCDC88BA6NC98 1476 aa30.67■■■□□ 2.5
MEN1-201ENST00000312049 SMARCA2P51531 1590 aa30.64■■■□□ 2.5
MEN1-201ENST00000312049 EIF4G1Q04637 1599 aaKnown RBP30.55■■■□□ 2.48
MEN1-201ENST00000312049 PEG3Q9GZU2 1588 aa30.54■■■□□ 2.48
MEN1-201ENST00000312049 ATAD2BQ9ULI0 1458 aa30.54■■■□□ 2.48
MEN1-201ENST00000312049 FAM9AQ8IZU1 332 aaPredicted RBP30.53■■■□□ 2.48
MEN1-201ENST00000312049 BAZ1BQ9UIG0 1483 aaKnown RBP30.38■■■□□ 2.45
MEN1-201ENST00000312049 ABCC8Q09428 1581 aa30.35■■■□□ 2.45
MEN1-201ENST00000312049 EHMT2Q96KQ7 1210 aa30.32■■■□□ 2.44
MEN1-201ENST00000312049 TRIM26Q12899 539 aaPredicted RBP30.3■■■□□ 2.44
MEN1-201ENST00000312049 PPARGC1BQ86YN6 1023 aaKnown RBP30.24■■■□□ 2.43
MEN1-201ENST00000312049 NCAPD3P42695 1498 aa30.07■■■□□ 2.4
MEN1-201ENST00000312049 HMGXB3Q12766 1538 aa29.99■■■□□ 2.39
MEN1-201ENST00000312049 CC2D2AQ9P2K1 1620 aa29.87■■■□□ 2.37
MEN1-201ENST00000312049 WRNQ14191 1432 aaPredicted RBP eCLIP29.86■■■□□ 2.37
MEN1-201ENST00000312049 SOGA1O94964 1423 aa29.86■■■□□ 2.37
MEN1-201ENST00000312049 SYNJ1O43426 1573 aa29.82■■■□□ 2.36
MEN1-201ENST00000312049 RUSC2Q8N2Y8 1516 aa29.81■■■□□ 2.36
MEN1-201ENST00000312049 CFTRP13569 1480 aa29.59■■■□□ 2.33
MEN1-201ENST00000312049 CSRNP3Q8WYN3 585 aa29.52■■■□□ 2.32
MEN1-201ENST00000312049 ZEB1P37275 1124 aaPredicted RBP29.51■■■□□ 2.31
MEN1-201ENST00000312049 DNAJC5BQ9UF47 199 aa29.51■■■□□ 2.31
MEN1-201ENST00000312049 TOP2BQ02880 1626 aa29.47■■■□□ 2.31
MEN1-201ENST00000312049 CUX1P39880 1505 aa29.44■■■□□ 2.3
MEN1-201ENST00000312049 CADPSQ9ULU8 1353 aa29.43■■■□□ 2.3
MEN1-201ENST00000312049 BIVM-ERCC5R4GMW8 1640 aa29.39■■■□□ 2.3
MEN1-201ENST00000312049 EEA1Q15075 1411 aa29.39■■■□□ 2.3
MEN1-201ENST00000312049 NESP48681 1621 aa29.33■■■□□ 2.29
MEN1-201ENST00000312049 CEP162Q5TB80 1403 aa29.32■■■□□ 2.28
MEN1-201ENST00000312049 UBTFP17480 764 aaKnown RBP29.31■■■□□ 2.28
MEN1-201ENST00000312049 PRDM2Q13029 1718 aa29.31■■■□□ 2.28
MEN1-201ENST00000312049 TTBK1Q5TCY1 1321 aaPredicted RBP29.29■■■□□ 2.28
MEN1-201ENST00000312049 TNIKQ9UKE5 1360 aa29.27■■■□□ 2.28
MEN1-201ENST00000312049 GOLGA3Q08378 1498 aa29.22■■■□□ 2.27
MEN1-201ENST00000312049 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP29.18■■■□□ 2.26
MEN1-201ENST00000312049 FANCD2Q9BXW9 1451 aa29.16■■■□□ 2.26
MEN1-201ENST00000312049 RAPGEF2Q9Y4G8 1499 aa29.16■■■□□ 2.26
MEN1-201ENST00000312049 CEP164Q9UPV0 1460 aa29.14■■■□□ 2.25
MEN1-201ENST00000312049 KIF21BO75037 1637 aa29.12■■■□□ 2.25
MEN1-201ENST00000312049 RANGAP1P46060 587 aaPredicted RBP29.07■■■□□ 2.24
MEN1-201ENST00000312049 CCER1Q8TC90 406 aaPredicted RBP29.06■■■□□ 2.24
MEN1-201ENST00000312049 FGD5Q6ZNL6 1462 aa29.04■■■□□ 2.24
MEN1-201ENST00000312049 KIF27Q86VH2 1401 aa28.98■■■□□ 2.23
MEN1-201ENST00000312049 CUX2O14529 1486 aa28.96■■■□□ 2.23
MEN1-201ENST00000312049 PRXQ9BXM0 1461 aa28.94■■■□□ 2.22
MEN1-201ENST00000312049 LAMC3Q9Y6N6 1575 aa28.92■■■□□ 2.22
MEN1-201ENST00000312049 RAD54L2Q9Y4B4 1467 aa28.9■■■□□ 2.22
MEN1-201ENST00000312049 TOPBP1Q92547 1522 aa28.89■■■□□ 2.22
MEN1-201ENST00000312049 CLIP1P30622 1438 aa28.87■■■□□ 2.21
MEN1-201ENST00000312049 DNMBPQ6XZF7 1577 aa28.86■■■□□ 2.21
MEN1-201ENST00000312049 URB2Q14146 1524 aaKnown RBP28.84■■■□□ 2.21
MEN1-201ENST00000312049 POLA1P09884 1462 aaPredicted RBP28.82■■■□□ 2.2
MEN1-201ENST00000312049 IGF1RP08069 1367 aa28.81■■■□□ 2.2
MEN1-201ENST00000312049 KIF21AQ7Z4S6 1674 aa28.8■■■□□ 2.2
MEN1-201ENST00000312049 ERICH3Q5RHP9 1530 aa28.8■■■□□ 2.2
MEN1-201ENST00000312049 PDS5BQ9NTI5 1447 aa28.74■■■□□ 2.19
MEN1-201ENST00000312049 CARMIL1Q5VZK9 1371 aa28.65■■■□□ 2.18
MEN1-201ENST00000312049 ABCA10Q8WWZ4 1543 aa28.65■■■□□ 2.18
MEN1-201ENST00000312049 VPS8Q8N3P4 1428 aa28.64■■■□□ 2.17
MEN1-201ENST00000312049 HNRNPUL2Q1KMD3 747 aaKnown RBP28.59■■■□□ 2.17
MEN1-201ENST00000312049 TDRD9Q8NDG6 1382 aaKnown RBP28.58■■■□□ 2.17
MEN1-201ENST00000312049 APLP2Q06481 763 aa28.58■■■□□ 2.17
MEN1-201ENST00000312049 ARAP1Q96P48 1450 aa28.58■■■□□ 2.17
MEN1-201ENST00000312049 WDR97A6NE52 1622 aa28.51■■■□□ 2.15
MEN1-201ENST00000312049 ARHGAP35Q9NRY4 1499 aa28.47■■■□□ 2.15
MEN1-201ENST00000312049 DIEXFQ68CQ4 756 aaKnown RBP28.4■■■□□ 2.14
MEN1-201ENST00000312049 ABCA5Q8WWZ7 1642 aa28.4■■■□□ 2.14
MEN1-201ENST00000312049 MRC2Q9UBG0 1479 aa28.39■■■□□ 2.14
MEN1-201ENST00000312049 TARBP1Q13395 1621 aaKnown RBP28.39■■■□□ 2.14
MEN1-201ENST00000312049 GAPVD1Q14C86 1478 aa28.38■■■□□ 2.13
MEN1-201ENST00000312049 P3H3Q8IVL6 736 aa28.35■■■□□ 2.13
MEN1-201ENST00000312049 KANK4Q5T7N3 995 aaPredicted RBP28.31■■■□□ 2.12
MEN1-201ENST00000312049 AQRO60306 1485 aaKnown RBP eCLIP28.31■■■□□ 2.122e-6■■■■■ 31.7
Retrieved 100 of 20,778 RNA–protein pairs in 41.5 ms