Protein–RNA interactions for Protein: Q9Y5G7

PCDHGA6, Protocadherin gamma-A6, humanhuman

Predictions only

Length 932 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA6Q9Y5G7 ANKRD16-201ENST00000191063 1567 ntTSL 3 BASIC24.43■■□□□ 1.5
PCDHGA6Q9Y5G7 HOOK2-201ENST00000264827 2603 ntAPPRIS P1 TSL 1 (best) BASIC24.43■■□□□ 1.5
PCDHGA6Q9Y5G7 CHST11-202ENST00000546689 756 ntTSL 2 BASIC24.43■■□□□ 1.5
PCDHGA6Q9Y5G7 UBA52-204ENST00000595158 743 ntAPPRIS P1 TSL 3 BASIC24.43■■□□□ 1.5
PCDHGA6Q9Y5G7 ST6GALNAC6-205ENST00000373146 2460 ntAPPRIS P3 TSL 1 (best) BASIC24.43■■□□□ 1.5
PCDHGA6Q9Y5G7 PELI3-203ENST00000524466 1671 ntTSL 1 (best) BASIC24.42■■□□□ 1.5
PCDHGA6Q9Y5G7 RAB26-201ENST00000210187 1675 ntAPPRIS P1 TSL 1 (best) BASIC24.41■■□□□ 1.5
PCDHGA6Q9Y5G7 PLSCR3-209ENST00000574401 2032 ntAPPRIS P1 TSL 1 (best) BASIC24.41■■□□□ 1.5
PCDHGA6Q9Y5G7 ZNF219-201ENST00000360947 3071 ntAPPRIS P1 TSL 1 (best) BASIC24.41■■□□□ 1.5
PCDHGA6Q9Y5G7 HOXB3-201ENST00000311626 2642 ntAPPRIS P1 TSL 1 (best) BASIC24.41■■□□□ 1.5
PCDHGA6Q9Y5G7 CFAP73-201ENST00000335621 1514 ntAPPRIS P1 TSL 5 BASIC24.4■■□□□ 1.5
PCDHGA6Q9Y5G7 RUNDC3A-206ENST00000590941 1675 ntTSL 1 (best) BASIC24.4■■□□□ 1.5
PCDHGA6Q9Y5G7 ZNF775-201ENST00000329630 2257 ntAPPRIS P1 TSL 1 (best) BASIC24.4■■□□□ 1.5
PCDHGA6Q9Y5G7 S1PR4-201ENST00000246115 1565 ntAPPRIS P1 BASIC24.4■■□□□ 1.5
PCDHGA6Q9Y5G7 C9orf40-201ENST00000376854 2327 ntAPPRIS P1 TSL 1 (best) BASIC24.4■■□□□ 1.5
PCDHGA6Q9Y5G7 PGM5P2-201ENST00000613141 1980 ntTSL 1 (best) BASIC24.4■■□□□ 1.5
PCDHGA6Q9Y5G7 NME2-205ENST00000512737 826 ntAPPRIS P1 TSL 1 (best) BASIC24.39■■□□□ 1.49
PCDHGA6Q9Y5G7 SLC30A10-202ENST00000366926 1915 ntAPPRIS P1 TSL 1 (best) BASIC24.39■■□□□ 1.49
PCDHGA6Q9Y5G7 BMP7-204ENST00000450594 1857 ntTSL 2 BASIC24.38■■□□□ 1.49
PCDHGA6Q9Y5G7 EMID1-203ENST00000404820 2118 ntTSL 5 BASIC24.38■■□□□ 1.49
PCDHGA6Q9Y5G7 POLR3H-201ENST00000337566 1330 ntTSL 1 (best) BASIC24.37■■□□□ 1.49
PCDHGA6Q9Y5G7 AP003068.2-202ENST00000526623 1662 ntTSL 2 BASIC24.37■■□□□ 1.49
PCDHGA6Q9Y5G7 THAP11-201ENST00000303596 2114 ntAPPRIS P1 BASIC24.37■■□□□ 1.49
PCDHGA6Q9Y5G7 RASSF8-202ENST00000381352 2320 ntTSL 1 (best) BASIC24.36■■□□□ 1.49
PCDHGA6Q9Y5G7 CLTA-207ENST00000470744 1102 ntTSL 2 BASIC24.36■■□□□ 1.49
PCDHGA6Q9Y5G7 RPS20-211ENST00000524349 752 ntTSL 1 (best) BASIC24.36■■□□□ 1.49
PCDHGA6Q9Y5G7 ACTR3B-201ENST00000256001 2216 ntAPPRIS P1 TSL 1 (best) BASIC24.35■■□□□ 1.49
PCDHGA6Q9Y5G7 MTCH1-201ENST00000373616 2006 ntTSL 1 (best) BASIC24.35■■□□□ 1.49
PCDHGA6Q9Y5G7 ADAP1-201ENST00000265846 2363 ntAPPRIS P1 TSL 1 (best) BASIC24.35■■□□□ 1.49
PCDHGA6Q9Y5G7 PICK1-201ENST00000356976 2055 ntAPPRIS P1 TSL 1 (best) BASIC24.34■■□□□ 1.49
PCDHGA6Q9Y5G7 HDGF-210ENST00000537739 2073 ntAPPRIS P1 TSL 1 (best) BASIC24.34■■□□□ 1.49
PCDHGA6Q9Y5G7 AC142086.6-201ENST00000621154 1765 ntBASIC24.34■■□□□ 1.49
PCDHGA6Q9Y5G7 ENKD1-201ENST00000243878 1579 ntAPPRIS P1 TSL 1 (best) BASIC24.34■■□□□ 1.49
PCDHGA6Q9Y5G7 COQ2-202ENST00000311469 1641 ntAPPRIS P2 TSL 1 (best) BASIC24.34■■□□□ 1.49
PCDHGA6Q9Y5G7 C2orf88-204ENST00000409870 1441 ntAPPRIS P1 TSL 2 BASIC24.34■■□□□ 1.49
PCDHGA6Q9Y5G7 AL135925.1-201ENST00000605920 1701 ntBASIC24.33■■□□□ 1.49
PCDHGA6Q9Y5G7 COL13A1-214ENST00000522165 2061 ntAPPRIS ALT2 TSL 5 BASIC24.33■■□□□ 1.48
PCDHGA6Q9Y5G7 SURF1-201ENST00000371974 1093 ntAPPRIS P1 TSL 1 (best) BASIC24.32■■□□□ 1.48
PCDHGA6Q9Y5G7 AC068134.2-201ENST00000437095 576 ntTSL 3 BASIC24.32■■□□□ 1.48
PCDHGA6Q9Y5G7 SURF1-205ENST00000615505 991 ntTSL 1 (best) BASIC24.32■■□□□ 1.48
PCDHGA6Q9Y5G7 AC073111.5-206ENST00000642087 859 ntAPPRIS P1 BASIC24.32■■□□□ 1.48
PCDHGA6Q9Y5G7 CARS2-201ENST00000257347 1879 ntAPPRIS P1 TSL 1 (best) BASIC24.32■■□□□ 1.48
PCDHGA6Q9Y5G7 HNRNPAB-202ENST00000358344 1796 ntAPPRIS P4 TSL 1 (best) BASIC24.31■■□□□ 1.48
PCDHGA6Q9Y5G7 PLSCR3-214ENST00000619711 2066 ntTSL 5 BASIC24.31■■□□□ 1.48
PCDHGA6Q9Y5G7 WSB2-201ENST00000315436 2646 ntAPPRIS P1 TSL 1 (best) BASIC24.31■■□□□ 1.48
PCDHGA6Q9Y5G7 AC018755.3-201ENST00000598755 664 ntTSL 2 BASIC24.31■■□□□ 1.48
PCDHGA6Q9Y5G7 YAP1-204ENST00000526343 2393 ntTSL 5 BASIC24.31■■□□□ 1.48
PCDHGA6Q9Y5G7 TMEM147-202ENST00000392204 935 ntTSL 2 BASIC24.3■■□□□ 1.48
PCDHGA6Q9Y5G7 ADAT3-201ENST00000329478 1620 ntAPPRIS P1 TSL 1 (best) BASIC24.29■■□□□ 1.48
PCDHGA6Q9Y5G7 TPT1-202ENST00000379055 948 ntTSL 2 BASIC24.29■■□□□ 1.48
PCDHGA6Q9Y5G7 RARRES2P2-201ENST00000394842 485 ntBASIC24.29■■□□□ 1.48
PCDHGA6Q9Y5G7 AC007383.2-202ENST00000435627 482 ntTSL 2 BASIC24.29■■□□□ 1.48
PCDHGA6Q9Y5G7 SMARCD3-203ENST00000392811 2018 ntTSL 1 (best) BASIC24.28■■□□□ 1.48
PCDHGA6Q9Y5G7 HAND2-201ENST00000359562 2780 ntAPPRIS P1 TSL 1 (best) BASIC24.28■■□□□ 1.48
PCDHGA6Q9Y5G7 GPR75-ASB3-201ENST00000406625 2113 ntAPPRIS P1 TSL 2 BASIC24.28■■□□□ 1.48
PCDHGA6Q9Y5G7 RUNX2-211ENST00000625924 1458 ntAPPRIS ALT2 TSL 1 (best) BASIC24.27■■□□□ 1.48
PCDHGA6Q9Y5G7 MAP3K8-203ENST00000375322 932 ntTSL 2 BASIC24.27■■□□□ 1.48
PCDHGA6Q9Y5G7 U2AF1-203ENST00000398137 1019 ntTSL 1 (best) BASIC24.27■■□□□ 1.48
PCDHGA6Q9Y5G7 GPX1-201ENST00000419349 1106 ntBASIC24.27■■□□□ 1.48
PCDHGA6Q9Y5G7 U2AF1L5-212ENST00000639996 1019 ntTSL 1 (best) BASIC24.27■■□□□ 1.48
PCDHGA6Q9Y5G7 ZBTB25-202ENST00000555220 1440 ntTSL 1 (best) BASIC24.27■■□□□ 1.48
PCDHGA6Q9Y5G7 PKIG-207ENST00000372894 1191 ntAPPRIS P1 TSL 1 (best) BASIC24.26■■□□□ 1.47
PCDHGA6Q9Y5G7 FAM168B-201ENST00000389915 944 ntAPPRIS P1 TSL 3 BASIC24.26■■□□□ 1.47
PCDHGA6Q9Y5G7 AC008813.1-201ENST00000536597 885 ntBASIC24.26■■□□□ 1.47
PCDHGA6Q9Y5G7 AC127502.1-201ENST00000399971 1502 ntBASIC24.25■■□□□ 1.47
PCDHGA6Q9Y5G7 DHRS13-202ENST00000394901 2037 ntTSL 1 (best) BASIC24.25■■□□□ 1.47
PCDHGA6Q9Y5G7 LINC01896-206ENST00000575722 1256 ntTSL 2 BASIC24.25■■□□□ 1.47
PCDHGA6Q9Y5G7 GRK6-206ENST00000507633 1660 ntTSL 5 BASIC24.24■■□□□ 1.47
PCDHGA6Q9Y5G7 SHARPIN-202ENST00000398712 1765 ntAPPRIS P1 TSL 1 (best) BASIC24.24■■□□□ 1.47
PCDHGA6Q9Y5G7 SHOX2-204ENST00000483851 1866 ntAPPRIS ALT2 TSL 2 BASIC24.24■■□□□ 1.47
PCDHGA6Q9Y5G7 BLOC1S3-202ENST00000587722 732 ntAPPRIS P1 BASIC24.24■■□□□ 1.47
PCDHGA6Q9Y5G7 RNF126P1-201ENST00000567452 1320 ntBASIC24.24■■□□□ 1.47
PCDHGA6Q9Y5G7 AC135983.2-203ENST00000454486 1613 ntBASIC24.24■■□□□ 1.47
PCDHGA6Q9Y5G7 TOMM40-201ENST00000252487 1707 ntAPPRIS P2 TSL 1 (best) BASIC24.24■■□□□ 1.47
PCDHGA6Q9Y5G7 TOMM40-202ENST00000405636 1709 ntAPPRIS P2 TSL 1 (best) BASIC24.24■■□□□ 1.47
PCDHGA6Q9Y5G7 FGF18-201ENST00000274625 1986 ntAPPRIS P1 TSL 1 (best) BASIC24.23■■□□□ 1.47
PCDHGA6Q9Y5G7 BAX-202ENST00000345358 793 ntAPPRIS P1 TSL 1 (best) BASIC24.23■■□□□ 1.47
PCDHGA6Q9Y5G7 PTPMT1-203ENST00000426530 1014 ntTSL 1 (best) BASIC24.23■■□□□ 1.47
PCDHGA6Q9Y5G7 NPB-202ENST00000573081 2154 ntAPPRIS ALT2 BASIC24.22■■□□□ 1.47
PCDHGA6Q9Y5G7 CDH24-206ENST00000610348 2037 ntTSL 1 (best) BASIC24.22■■□□□ 1.47
PCDHGA6Q9Y5G7 SPATA5L1-208ENST00000638607 1863 ntTSL 2 BASIC24.22■■□□□ 1.47
PCDHGA6Q9Y5G7 C11orf80-204ENST00000525908 2135 ntAPPRIS P3 TSL 2 BASIC24.22■■□□□ 1.47
PCDHGA6Q9Y5G7 HAUS7-201ENST00000370210 1593 ntAPPRIS ALT2 TSL 2 BASIC24.21■■□□□ 1.47
PCDHGA6Q9Y5G7 CBWD5-202ENST00000377384 1347 ntTSL 1 (best) BASIC24.21■■□□□ 1.47
PCDHGA6Q9Y5G7 TSPAN4-207ENST00000397411 1025 ntAPPRIS P1 TSL 2 BASIC24.21■■□□□ 1.47
PCDHGA6Q9Y5G7 BANF1-208ENST00000533166 1135 ntAPPRIS P1 TSL 2 BASIC24.21■■□□□ 1.47
PCDHGA6Q9Y5G7 C16orf74-204ENST00000602719 1002 ntAPPRIS ALT2 TSL 3 BASIC24.21■■□□□ 1.47
PCDHGA6Q9Y5G7 ABHD17AP5-201ENST00000580133 923 ntBASIC24.2■■□□□ 1.46
PCDHGA6Q9Y5G7 EFEMP2-201ENST00000307998 2034 ntAPPRIS P1 TSL 1 (best) BASIC24.2■■□□□ 1.46
PCDHGA6Q9Y5G7 LZTS2-201ENST00000370220 5741 ntAPPRIS P1 TSL 1 (best) BASIC24.19■■□□□ 1.46
PCDHGA6Q9Y5G7 MTCH1-202ENST00000373627 2057 ntAPPRIS P1 TSL 1 (best) BASIC24.19■■□□□ 1.46
PCDHGA6Q9Y5G7 BOK-AS1-201ENST00000434306 643 ntTSL 1 (best) BASIC24.19■■□□□ 1.46
PCDHGA6Q9Y5G7 GSX2-202ENST00000503800 1181 ntTSL 5 BASIC24.19■■□□□ 1.46
PCDHGA6Q9Y5G7 WHAMMP2-203ENST00000563942 1603 ntBASIC24.19■■□□□ 1.46
PCDHGA6Q9Y5G7 MNX1-201ENST00000252971 2174 ntAPPRIS P3 TSL 1 (best) BASIC24.18■■□□□ 1.46
PCDHGA6Q9Y5G7 C1orf122-201ENST00000373042 973 ntAPPRIS P3 TSL 1 (best) BASIC24.17■■□□□ 1.46
PCDHGA6Q9Y5G7 LACTB-201ENST00000261893 1972 ntAPPRIS P1 TSL 1 (best) BASIC24.16■■□□□ 1.46
PCDHGA6Q9Y5G7 NPDC1-201ENST00000371600 2187 ntAPPRIS ALT2 TSL 1 (best) BASIC24.16■■□□□ 1.46
PCDHGA6Q9Y5G7 MFSD12-201ENST00000355415 2124 ntAPPRIS P3 TSL 1 (best) BASIC24.16■■□□□ 1.46
PCDHGA6Q9Y5G7 HSD17B12-202ENST00000395700 994 ntTSL 1 (best) BASIC24.16■■□□□ 1.46
Retrieved 100 of 98,524 protein–RNA pairs in 17 ms