Protein–RNA interactions for Protein: Q9N2K0

HERV-H_2q24.3 provirus ancestral Env polyprotein, humanhuman

Predictions only

Length 584 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Q9N2K0 NXPH3-201ENST00000328741 2179 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
Q9N2K0 UCK1-204ENST00000372215 2167 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
Q9N2K0 RASL10A-202ENST00000401450 1720 ntTSL 2 BASIC21.22■□□□□ 0.99
Q9N2K0 PSMG4-202ENST00000380305 489 ntTSL 5 BASIC21.22■□□□□ 0.99
Q9N2K0 AC005559.1-201ENST00000589661 871 ntBASIC21.22■□□□□ 0.99
Q9N2K0 POU3F3-201ENST00000361360 3064 ntAPPRIS P1 BASIC21.22■□□□□ 0.99
Q9N2K0 CLK2-203ENST00000368361 2166 ntAPPRIS ALT1 TSL 1 (best) BASIC21.21■□□□□ 0.99
Q9N2K0 HSD11B1L-202ENST00000339423 1660 ntAPPRIS P3 TSL 1 (best) BASIC21.21■□□□□ 0.99
Q9N2K0 RCC1L-205ENST00000618035 1409 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
Q9N2K0 FAM220A-201ENST00000313324 2214 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
Q9N2K0 AC027237.3-202ENST00000558617 1778 ntTSL 2 BASIC21.21■□□□□ 0.99
Q9N2K0 POLR1D-201ENST00000302979 1166 ntAPPRIS P2 TSL 1 (best) BASIC21.21■□□□□ 0.99
Q9N2K0 LMO1-202ENST00000428101 1038 ntAPPRIS ALT1 TSL 1 (best) BASIC21.21■□□□□ 0.99
Q9N2K0 TAZ-213ENST00000601016 1889 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
Q9N2K0 KIAA1456-206ENST00000528753 2392 ntTSL 2 BASIC21.21■□□□□ 0.99
Q9N2K0 TANGO2-214ENST00000447208 2086 ntTSL 3 BASIC21.2■□□□□ 0.98
Q9N2K0 NKX2-1-204ENST00000522719 1417 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
Q9N2K0 MFSD12-202ENST00000389395 2039 ntAPPRIS ALT2 TSL 1 (best) BASIC21.19■□□□□ 0.98
Q9N2K0 AC135983.2-203ENST00000454486 1613 ntBASIC21.19■□□□□ 0.98
Q9N2K0 NKPD1-202ENST00000589776 1950 ntAPPRIS P1 BASIC21.19■□□□□ 0.98
Q9N2K0 DTNBP1-202ENST00000344537 1403 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
Q9N2K0 SLC9A3R2-201ENST00000424542 2194 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
Q9N2K0 ZFPM1-201ENST00000319555 5380 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
Q9N2K0 NAA50-207ENST00000493900 962 ntAPPRIS ALT1 TSL 2 BASIC21.18■□□□□ 0.98
Q9N2K0 SUZ12P1-203ENST00000578195 985 ntBASIC21.18■□□□□ 0.98
Q9N2K0 HNRNPLP2-201ENST00000568980 1570 ntBASIC21.18■□□□□ 0.98
Q9N2K0 C16orf59-202ENST00000483320 1709 ntAPPRIS ALT2 TSL 2 BASIC21.18■□□□□ 0.98
Q9N2K0 MAD2L2-205ENST00000376669 864 ntTSL 3 BASIC21.17■□□□□ 0.98
Q9N2K0 AKAP8L-208ENST00000595465 1933 ntTSL 2 BASIC21.17■□□□□ 0.98
Q9N2K0 HTR6-201ENST00000289753 1984 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
Q9N2K0 MXRA7-202ENST00000375036 1950 ntAPPRIS ALT2 TSL 2 BASIC21.17■□□□□ 0.98
Q9N2K0 RPUSD1-207ENST00000565809 1918 ntTSL 2 BASIC21.16■□□□□ 0.98
Q9N2K0 RCE1-201ENST00000309657 1485 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
Q9N2K0 AC108673.1-201ENST00000510422 1159 ntBASIC21.16■□□□□ 0.98
Q9N2K0 JMJD8-202ENST00000562111 823 ntTSL 2 BASIC21.16■□□□□ 0.98
Q9N2K0 ECI1-203ENST00000562238 948 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
Q9N2K0 ZDHHC16-204ENST00000370842 1877 ntAPPRIS ALT1 TSL 5 BASIC21.15■□□□□ 0.98
Q9N2K0 BCAP31-207ENST00000458587 1810 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
Q9N2K0 CD6-206ENST00000452451 1782 ntAPPRIS ALT2 TSL 1 (best) BASIC21.15■□□□□ 0.98
Q9N2K0 ABL2-203ENST00000392043 2140 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
Q9N2K0 KANSL2-215ENST00000553086 1830 ntTSL 5 BASIC21.15■□□□□ 0.98
Q9N2K0 FAM189B-210ENST00000621094 1335 ntTSL 1 (best) BASIC21.14■□□□□ 0.97
Q9N2K0 PPP1R14B-201ENST00000309318 982 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
Q9N2K0 AL133346.1-201ENST00000435287 495 ntTSL 2 BASIC21.14■□□□□ 0.97
Q9N2K0 LMO2-201ENST00000257818 2294 ntTSL 1 (best) BASIC21.14■□□□□ 0.97
Q9N2K0 SMDT1-201ENST00000331479 1567 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
Q9N2K0 WHAMMP2-203ENST00000563942 1603 ntBASIC21.13■□□□□ 0.97
Q9N2K0 PKDCC-201ENST00000294964 2502 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
Q9N2K0 THAP4-204ENST00000407315 2367 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
Q9N2K0 EI24-212ENST00000615917 1407 ntTSL 2 BASIC21.12■□□□□ 0.97
Q9N2K0 AC018358.1-201ENST00000631079 1402 ntBASIC21.12■□□□□ 0.97
Q9N2K0 APLP1-201ENST00000221891 2495 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
Q9N2K0 PDCD2-215ENST00000614056 1287 ntTSL 2 BASIC21.12■□□□□ 0.97
Q9N2K0 SOX1-201ENST00000330949 2842 ntAPPRIS P1 BASIC21.12■□□□□ 0.97
Q9N2K0 MTMR1-202ENST00000370390 2755 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
Q9N2K0 MARCKSL1-201ENST00000329421 1699 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
Q9N2K0 MAGI2-215ENST00000628980 6212 ntTSL 5 BASIC21.11■□□□□ 0.97
Q9N2K0 HOPX-206ENST00000503639 1248 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
Q9N2K0 FAM66E-202ENST00000533615 2087 ntTSL 2 BASIC21.11■□□□□ 0.97
Q9N2K0 PKM-203ENST00000389093 2279 ntTSL 5 BASIC21.11■□□□□ 0.97
Q9N2K0 DHRS13-201ENST00000378895 1921 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
Q9N2K0 RCAN1-201ENST00000313806 2490 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
Q9N2K0 SHF-207ENST00000560540 2062 ntTSL 5 BASIC21.1■□□□□ 0.97
Q9N2K0 MIR6090-201ENST00000622481 60 ntBASIC21.1■□□□□ 0.97
Q9N2K0 NRBF2-202ENST00000435510 1816 ntTSL 2 BASIC21.1■□□□□ 0.97
Q9N2K0 CCDC136-206ENST00000464832 1720 ntAPPRIS ALT2 TSL 5 BASIC21.09■□□□□ 0.97
Q9N2K0 ARMC10-205ENST00000428183 2445 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
Q9N2K0 CFAP73-201ENST00000335621 1514 ntAPPRIS P1 TSL 5 BASIC21.09■□□□□ 0.97
Q9N2K0 GKAP1-202ENST00000376365 1511 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
Q9N2K0 DPY19L1-209ENST00000638088 5075 ntAPPRIS ALT2 TSL 5 BASIC21.09■□□□□ 0.97
Q9N2K0 TCEA2-202ENST00000343484 1235 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
Q9N2K0 CPNE1-202ENST00000352393 2147 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
Q9N2K0 SNX15-202ENST00000377244 1939 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
Q9N2K0 AJAP1-201ENST00000378190 2383 ntAPPRIS P1 TSL 5 BASIC21.09■□□□□ 0.97
Q9N2K0 LINC00273-201ENST00000539813 1452 ntBASIC21.08■□□□□ 0.97
Q9N2K0 RFLNA-205ENST00000546355 2354 ntAPPRIS ALT1 TSL 1 (best) BASIC21.08■□□□□ 0.97
Q9N2K0 MAPK8IP1P1-201ENST00000574657 1439 ntBASIC21.08■□□□□ 0.97
Q9N2K0 LYNX1-208ENST00000615007 1293 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
Q9N2K0 C14orf80-205ENST00000392523 1845 ntAPPRIS ALT2 TSL 1 (best) BASIC21.08■□□□□ 0.96
Q9N2K0 FAM120AOS-202ENST00000423591 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC21.08■□□□□ 0.96
Q9N2K0 CACNG7-203ENST00000391767 2688 ntAPPRIS P1 TSL 5 BASIC21.08■□□□□ 0.96
Q9N2K0 PGAM5-201ENST00000317555 1182 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
Q9N2K0 OXSR1-203ENST00000446845 1908 ntTSL 5 BASIC21.07■□□□□ 0.96
Q9N2K0 RAD21-AS1-201ENST00000521487 2010 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
Q9N2K0 BBC3-204ENST00000449228 1827 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
Q9N2K0 HIST2H3C-201ENST00000369158 1656 ntAPPRIS P1 BASIC21.06■□□□□ 0.96
Q9N2K0 HIST2H3A-201ENST00000403683 1656 ntAPPRIS P1 BASIC21.06■□□□□ 0.96
Q9N2K0 UNCX-201ENST00000316333 2048 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
Q9N2K0 NKIRAS2-202ENST00000316082 833 ntTSL 5 BASIC21.06■□□□□ 0.96
Q9N2K0 DUX4L28-201ENST00000623687 678 ntBASIC21.06■□□□□ 0.96
Q9N2K0 FBXL8-206ENST00000519917 1460 ntAPPRIS P1 TSL 5 BASIC21.06■□□□□ 0.96
Q9N2K0 DNAJB2-202ENST00000392086 1946 ntAPPRIS P1 TSL 2 BASIC21.06■□□□□ 0.96
Q9N2K0 SYT12-205ENST00000527043 1661 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
Q9N2K0 ZDHHC16-207ENST00000393760 2014 ntAPPRIS P4 TSL 1 (best) BASIC21.04■□□□□ 0.96
Q9N2K0 MFAP2-202ENST00000375535 1260 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
Q9N2K0 TLE6-201ENST00000246112 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC21.04■□□□□ 0.96
Q9N2K0 ADAT3-201ENST00000329478 1620 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
Q9N2K0 CDPF1-201ENST00000314567 1875 ntAPPRIS P2 TSL 1 (best) BASIC21.03■□□□□ 0.96
Q9N2K0 C8orf58-202ENST00000409586 2021 ntAPPRIS ALT2 TSL 2 BASIC21.02■□□□□ 0.96
Q9N2K0 FAM185A-202ENST00000413034 1179 ntAPPRIS P4 TSL 5 BASIC21.02■□□□□ 0.96
Retrieved 100 of 98,524 protein–RNA pairs in 15.3 ms