Protein–RNA interactions for Protein: Q9HCC9

ZFYVE28, Lateral signaling target protein 2 homolog, humanhuman

Predictions only

Length 887 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZFYVE28Q9HCC9 FAM222B-205ENST00000577682 549 ntTSL 4 BASIC29.68■■■□□ 2.34
ZFYVE28Q9HCC9 HOMER3-202ENST00000392351 1557 ntAPPRIS P3 TSL 1 (best) BASIC29.68■■■□□ 2.34
ZFYVE28Q9HCC9 MAPK8IP1P1-201ENST00000574657 1439 ntBASIC29.66■■■□□ 2.34
ZFYVE28Q9HCC9 C20orf24-201ENST00000342422 896 ntTSL 2 BASIC29.66■■■□□ 2.34
ZFYVE28Q9HCC9 C20orf24-202ENST00000344795 1114 ntAPPRIS P1 TSL 1 (best) BASIC29.66■■■□□ 2.34
ZFYVE28Q9HCC9 IZUMO4-202ENST00000395301 1021 ntAPPRIS ALT2 TSL 1 (best) BASIC29.66■■■□□ 2.34
ZFYVE28Q9HCC9 IFI30-201ENST00000407280 1134 ntAPPRIS P1 TSL 1 (best) BASIC29.66■■■□□ 2.34
ZFYVE28Q9HCC9 GRK6-206ENST00000507633 1660 ntTSL 5 BASIC29.66■■■□□ 2.34
ZFYVE28Q9HCC9 GATA6-202ENST00000581694 2057 ntAPPRIS P1 TSL 1 (best) BASIC29.65■■■□□ 2.34
ZFYVE28Q9HCC9 LOR-201ENST00000368742 1230 ntAPPRIS P1 TSL 1 (best) BASIC29.65■■■□□ 2.34
ZFYVE28Q9HCC9 CMPK2-203ENST00000458098 1224 ntTSL 1 (best) BASIC29.64■■■□□ 2.34
ZFYVE28Q9HCC9 MAP4K3-211ENST00000484274 407 ntTSL 2 BASIC29.64■■■□□ 2.34
ZFYVE28Q9HCC9 HES4-204ENST00000484667 667 ntTSL 3 BASIC29.64■■■□□ 2.34
ZFYVE28Q9HCC9 AC126177.7-201ENST00000547904 679 ntBASIC29.64■■■□□ 2.34
ZFYVE28Q9HCC9 MMP28-203ENST00000612672 1092 ntTSL 1 (best) BASIC29.64■■■□□ 2.34
ZFYVE28Q9HCC9 FOXO6-202ENST00000641094 1476 ntAPPRIS P1 BASIC29.62■■■□□ 2.33
ZFYVE28Q9HCC9 ILDR2-208ENST00000529387 1238 ntTSL 5 BASIC29.62■■■□□ 2.33
ZFYVE28Q9HCC9 SEC11C-204ENST00000587834 1202 ntAPPRIS P1 TSL 1 (best) BASIC29.62■■■□□ 2.33
ZFYVE28Q9HCC9 SSBP3-204ENST00000371320 2077 ntAPPRIS P3 TSL 1 (best) BASIC29.62■■■□□ 2.33
ZFYVE28Q9HCC9 TXNL4A-208ENST00000588162 752 ntTSL 2 BASIC29.61■■■□□ 2.33
ZFYVE28Q9HCC9 ATXN3-252ENST00000620536 1044 ntTSL 5 BASIC29.61■■■□□ 2.33
ZFYVE28Q9HCC9 ATXN3-253ENST00000621269 936 ntTSL 5 BASIC29.61■■■□□ 2.33
ZFYVE28Q9HCC9 SERP2-201ENST00000379179 784 ntAPPRIS P1 TSL 1 (best) BASIC29.6■■■□□ 2.33
ZFYVE28Q9HCC9 DCDC2C-201ENST00000399143 1476 ntAPPRIS P1 TSL 5 BASIC29.6■■■□□ 2.33
ZFYVE28Q9HCC9 MAPK12-201ENST00000215659 1918 ntAPPRIS P1 TSL 1 (best) BASIC29.59■■■□□ 2.33
ZFYVE28Q9HCC9 KRTAP5-5-201ENST00000399676 933 ntAPPRIS P1 BASIC29.59■■■□□ 2.33
ZFYVE28Q9HCC9 CRELD2-203ENST00000404488 1577 ntAPPRIS ALT2 TSL 1 (best) BASIC29.59■■■□□ 2.33
ZFYVE28Q9HCC9 ZNF470-206ENST00000601902 1640 ntTSL 1 (best) BASIC29.59■■■□□ 2.33
ZFYVE28Q9HCC9 ARL6IP4-208ENST00000439686 796 ntAPPRIS ALT2 TSL 3 BASIC29.58■■■□□ 2.33
ZFYVE28Q9HCC9 TMEM229A-201ENST00000455783 2108 ntAPPRIS P1 BASIC29.57■■■□□ 2.32
ZFYVE28Q9HCC9 PROSER2-202ENST00000379200 1232 ntAPPRIS ALT2 BASIC29.57■■■□□ 2.32
ZFYVE28Q9HCC9 PEX7-203ENST00000541292 945 ntTSL 5 BASIC29.57■■■□□ 2.32
ZFYVE28Q9HCC9 AC129492.7-201ENST00000622992 756 ntBASIC29.57■■■□□ 2.32
ZFYVE28Q9HCC9 TAZ-201ENST00000369776 1596 ntTSL 1 (best) BASIC29.56■■■□□ 2.32
ZFYVE28Q9HCC9 NKX2-1-204ENST00000522719 1417 ntAPPRIS P1 TSL 1 (best) BASIC29.56■■■□□ 2.32
ZFYVE28Q9HCC9 LYPD6B-204ENST00000409876 1248 ntAPPRIS ALT2 TSL 1 (best) BASIC29.56■■■□□ 2.32
ZFYVE28Q9HCC9 C1QTNF8-201ENST00000328449 1627 ntAPPRIS P1 TSL 5 BASIC29.56■■■□□ 2.32
ZFYVE28Q9HCC9 G6PC3-201ENST00000269097 1533 ntAPPRIS P1 TSL 1 (best) BASIC29.55■■■□□ 2.32
ZFYVE28Q9HCC9 UBE2I-213ENST00000566587 1098 ntAPPRIS P1 TSL 2 BASIC29.55■■■□□ 2.32
ZFYVE28Q9HCC9 SOD3-201ENST00000382120 1526 ntAPPRIS P1 TSL 1 (best) BASIC29.55■■■□□ 2.32
ZFYVE28Q9HCC9 SSTR5-201ENST00000293897 1362 ntAPPRIS P1 BASIC29.54■■■□□ 2.32
ZFYVE28Q9HCC9 MOB2-207ENST00000614710 705 ntTSL 5 BASIC29.54■■■□□ 2.32
ZFYVE28Q9HCC9 MIR1-1HG-202ENST00000624914 1220 ntTSL 1 (best) BASIC29.54■■■□□ 2.32
ZFYVE28Q9HCC9 AL035685.1-201ENST00000636663 812 ntBASIC29.54■■■□□ 2.32
ZFYVE28Q9HCC9 C14orf80-203ENST00000354560 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC29.54■■■□□ 2.32
ZFYVE28Q9HCC9 SIAH1-203ENST00000394725 2147 ntAPPRIS P3 TSL 1 (best) BASIC29.53■■■□□ 2.32
ZFYVE28Q9HCC9 COPRS-201ENST00000302362 968 ntAPPRIS P1 TSL 1 (best) BASIC29.53■■■□□ 2.32
ZFYVE28Q9HCC9 MAPK3-203ENST00000395199 1074 ntAPPRIS ALT2 TSL 1 (best) BASIC29.53■■■□□ 2.32
ZFYVE28Q9HCC9 DUX4L18-201ENST00000553347 1267 ntBASIC29.53■■■□□ 2.32
ZFYVE28Q9HCC9 WDR86-204ENST00000477459 1428 ntTSL 2 BASIC29.53■■■□□ 2.32
ZFYVE28Q9HCC9 HMX1-201ENST00000400677 1895 ntAPPRIS P1 TSL 1 (best) BASIC29.53■■■□□ 2.32
ZFYVE28Q9HCC9 CISD3-204ENST00000613478 2074 ntAPPRIS P1 TSL 2 BASIC29.52■■■□□ 2.32
ZFYVE28Q9HCC9 ZDHHC3-203ENST00000342790 1336 ntTSL 5 BASIC29.52■■■□□ 2.32
ZFYVE28Q9HCC9 MAPK9-202ENST00000347470 1509 ntTSL 5 BASIC29.52■■■□□ 2.32
ZFYVE28Q9HCC9 OVOL2-201ENST00000278780 1555 ntAPPRIS P1 TSL 1 (best) BASIC29.51■■■□□ 2.31
ZFYVE28Q9HCC9 AL121899.1-202ENST00000411839 536 ntTSL 5 BASIC29.5■■■□□ 2.31
ZFYVE28Q9HCC9 UBAC1-201ENST00000371756 1867 ntAPPRIS P1 TSL 1 (best) BASIC29.49■■■□□ 2.31
ZFYVE28Q9HCC9 EIF5A-211ENST00000576930 1439 ntAPPRIS P1 TSL 5 BASIC29.49■■■□□ 2.31
ZFYVE28Q9HCC9 TRIOBP-205ENST00000407319 2125 ntAPPRIS P3 TSL 1 (best) BASIC29.49■■■□□ 2.31
ZFYVE28Q9HCC9 MED25-210ENST00000612854 801 ntTSL 5 BASIC29.49■■■□□ 2.31
ZFYVE28Q9HCC9 MED25-213ENST00000620467 1293 ntTSL 1 (best) BASIC29.49■■■□□ 2.31
ZFYVE28Q9HCC9 MED25-214ENST00000622402 642 ntTSL 5 BASIC29.49■■■□□ 2.31
ZFYVE28Q9HCC9 KHDRBS3-201ENST00000355849 1977 ntAPPRIS P1 TSL 1 (best) BASIC29.49■■■□□ 2.31
ZFYVE28Q9HCC9 SPATA33-209ENST00000579310 1490 ntAPPRIS ALT2 TSL 2 BASIC29.48■■■□□ 2.31
ZFYVE28Q9HCC9 AL592293.1-201ENST00000502889 1188 ntBASIC29.48■■■□□ 2.31
ZFYVE28Q9HCC9 AC007029.1-201ENST00000604183 313 ntBASIC29.48■■■□□ 2.31
ZFYVE28Q9HCC9 PYY2-202ENST00000441253 1076 ntTSL 1 (best) BASIC29.47■■■□□ 2.31
ZFYVE28Q9HCC9 AL157400.5-201ENST00000507624 621 ntBASIC29.47■■■□□ 2.31
ZFYVE28Q9HCC9 MBOAT7-203ENST00000391754 1797 ntTSL 1 (best) BASIC29.47■■■□□ 2.31
ZFYVE28Q9HCC9 ATP11B-209ENST00000493826 963 ntTSL 1 (best) BASIC29.46■■■□□ 2.31
ZFYVE28Q9HCC9 AC148477.1-201ENST00000537720 476 ntTSL 3 BASIC29.46■■■□□ 2.31
ZFYVE28Q9HCC9 AC133552.2-201ENST00000619106 1032 ntBASIC29.46■■■□□ 2.31
ZFYVE28Q9HCC9 FAM78B-201ENST00000338353 1597 ntAPPRIS P1 TSL 1 (best) BASIC29.46■■■□□ 2.31
ZFYVE28Q9HCC9 HNRNPAB-205ENST00000506259 1674 ntAPPRIS ALT2 TSL 1 (best) BASIC29.46■■■□□ 2.31
ZFYVE28Q9HCC9 REST-210ENST00000638187 1334 ntTSL 5 BASIC29.45■■■□□ 2.31
ZFYVE28Q9HCC9 PGM5-201ENST00000396392 1782 ntTSL 1 (best) BASIC29.45■■■□□ 2.31
ZFYVE28Q9HCC9 RSPO4-202ENST00000400634 722 ntTSL 1 (best) BASIC29.45■■■□□ 2.31
ZFYVE28Q9HCC9 VIPR2-204ENST00000421760 717 ntTSL 3 BASIC29.45■■■□□ 2.31
ZFYVE28Q9HCC9 LTC4S-205ENST00000486713 496 ntTSL 2 BASIC29.45■■■□□ 2.31
ZFYVE28Q9HCC9 AL451085.2-201ENST00000605085 799 ntBASIC29.45■■■□□ 2.31
ZFYVE28Q9HCC9 FAHD1-204ENST00000615972 757 ntTSL 5 BASIC29.45■■■□□ 2.31
ZFYVE28Q9HCC9 CAPNS1-204ENST00000587718 1558 ntAPPRIS ALT2 TSL 1 (best) BASIC29.44■■■□□ 2.3
ZFYVE28Q9HCC9 ELK4-201ENST00000289703 2118 ntTSL 1 (best) BASIC29.44■■■□□ 2.3
ZFYVE28Q9HCC9 AC016910.1-201ENST00000422799 1046 ntTSL 1 (best) BASIC29.44■■■□□ 2.3
ZFYVE28Q9HCC9 FLVCR1-AS1-203ENST00000426161 892 ntTSL 1 (best) BASIC29.44■■■□□ 2.3
ZFYVE28Q9HCC9 UBE2D2-205ENST00000505548 1113 ntTSL 1 (best) BASIC29.44■■■□□ 2.3
ZFYVE28Q9HCC9 C16orf52-207ENST00000569656 1257 ntTSL 5 BASIC29.44■■■□□ 2.3
ZFYVE28Q9HCC9 TBX2-AS1-203ENST00000590421 861 ntTSL 2 BASIC29.44■■■□□ 2.3
ZFYVE28Q9HCC9 TRIR-205ENST00000592273 783 ntTSL 3 BASIC29.44■■■□□ 2.3
ZFYVE28Q9HCC9 AC009831.1-201ENST00000580420 1582 ntBASIC29.43■■■□□ 2.3
ZFYVE28Q9HCC9 FSD1L-208ENST00000495708 1906 ntTSL 1 (best) BASIC29.43■■■□□ 2.3
ZFYVE28Q9HCC9 MKRN1-202ENST00000443720 1601 ntAPPRIS ALT2 TSL 1 (best) BASIC29.42■■■□□ 2.3
ZFYVE28Q9HCC9 PSMG3-202ENST00000288607 1391 ntAPPRIS P1 TSL 1 (best) BASIC29.41■■■□□ 2.3
ZFYVE28Q9HCC9 LY6H-201ENST00000342752 951 ntAPPRIS ALT2 TSL 1 (best) BASIC29.41■■■□□ 2.3
ZFYVE28Q9HCC9 LY6H-202ENST00000414417 1056 ntAPPRIS ALT2 TSL 1 (best) BASIC29.41■■■□□ 2.3
ZFYVE28Q9HCC9 LY6H-203ENST00000430474 925 ntAPPRIS P3 TSL 3 BASIC29.41■■■□□ 2.3
ZFYVE28Q9HCC9 RAB26-201ENST00000210187 1675 ntAPPRIS P1 TSL 1 (best) BASIC29.4■■■□□ 2.3
ZFYVE28Q9HCC9 RASL10A-202ENST00000401450 1720 ntTSL 2 BASIC29.4■■■□□ 2.3
ZFYVE28Q9HCC9 RAB32-201ENST00000367495 1217 ntAPPRIS P1 TSL 1 (best) BASIC29.4■■■□□ 2.3
ZFYVE28Q9HCC9 ERFE-207ENST00000546354 1065 ntAPPRIS P2 TSL 1 (best) BASIC29.39■■■□□ 2.3
Retrieved 100 of 98,524 protein–RNA pairs in 55.3 ms