Protein–RNA interactions for Protein: Q9HBX3

SND1-IT1, Uncharacterized protein encoded by SND1-IT1, humanhuman

Predictions only

Length 110 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SND1-IT1Q9HBX3 C1orf122-204ENST00000468084 1234 ntAPPRIS ALT2 TSL 2 BASIC16.85■□□□□ 0.29
SND1-IT1Q9HBX3 MBD2-205ENST00000583046 1182 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
SND1-IT1Q9HBX3 AKAP8L-208ENST00000595465 1933 ntTSL 2 BASIC16.85■□□□□ 0.29
SND1-IT1Q9HBX3 ABHD17C-202ENST00000558464 1976 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
SND1-IT1Q9HBX3 PKM-203ENST00000389093 2279 ntTSL 5 BASIC16.85■□□□□ 0.29
SND1-IT1Q9HBX3 C11orf80-210ENST00000527634 1666 ntAPPRIS ALT2 TSL 5 BASIC16.85■□□□□ 0.29
SND1-IT1Q9HBX3 MFSD12-202ENST00000389395 2039 ntAPPRIS ALT2 TSL 1 (best) BASIC16.84■□□□□ 0.29
SND1-IT1Q9HBX3 ONECUT3-201ENST00000382349 8318 ntAPPRIS P1 TSL 5 BASIC16.84■□□□□ 0.29
SND1-IT1Q9HBX3 AC079305.1-201ENST00000428541 499 ntTSL 3 BASIC16.84■□□□□ 0.29
SND1-IT1Q9HBX3 AC091230.1-202ENST00000564823 5356 ntTSL 2 BASIC16.84■□□□□ 0.29
SND1-IT1Q9HBX3 UBE2L6-201ENST00000287156 1354 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
SND1-IT1Q9HBX3 BTBD19-203ENST00000450269 1572 ntAPPRIS P1 TSL 5 BASIC16.84■□□□□ 0.29
SND1-IT1Q9HBX3 LINC01003-201ENST00000564834 1764 ntBASIC16.84■□□□□ 0.29
SND1-IT1Q9HBX3 MBOAT7-201ENST00000245615 2529 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
SND1-IT1Q9HBX3 TNFRSF25-204ENST00000356876 1625 ntAPPRIS ALT2 TSL 1 (best) BASIC16.83■□□□□ 0.28
SND1-IT1Q9HBX3 CTSA-203ENST00000372459 1972 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
SND1-IT1Q9HBX3 FANCE-201ENST00000229769 2554 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
SND1-IT1Q9HBX3 AP004833.2-201ENST00000532228 1454 ntBASIC16.82■□□□□ 0.28
SND1-IT1Q9HBX3 NRGN-202ENST00000412681 1106 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
SND1-IT1Q9HBX3 TMEM64-203ENST00000458549 4997 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
SND1-IT1Q9HBX3 AUTS2-203ENST00000406775 5950 ntAPPRIS ALT2 TSL 1 (best) BASIC16.82■□□□□ 0.28
SND1-IT1Q9HBX3 CTDSPL-206ENST00000443503 4640 ntAPPRIS ALT1 TSL 1 (best) BASIC16.82■□□□□ 0.28
SND1-IT1Q9HBX3 NPAS3-203ENST00000357798 2763 ntAPPRIS ALT2 TSL 1 (best) BASIC16.82■□□□□ 0.28
SND1-IT1Q9HBX3 KHSRP-201ENST00000398148 2993 ntAPPRIS P2 TSL 1 (best) BASIC16.81■□□□□ 0.28
SND1-IT1Q9HBX3 FOXA3-201ENST00000302177 1989 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
SND1-IT1Q9HBX3 POU2F2-208ENST00000529952 1716 ntAPPRIS ALT2 TSL 1 (best) BASIC16.81■□□□□ 0.28
SND1-IT1Q9HBX3 GRK6-206ENST00000507633 1660 ntTSL 5 BASIC16.81■□□□□ 0.28
SND1-IT1Q9HBX3 CACNA1H-202ENST00000358590 8069 ntAPPRIS ALT2 TSL 5 BASIC16.8■□□□□ 0.28
SND1-IT1Q9HBX3 REPS2-202ENST00000357277 7953 ntAPPRIS P3 TSL 1 (best) BASIC16.8■□□□□ 0.28
SND1-IT1Q9HBX3 FHL2-202ENST00000344213 1769 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
SND1-IT1Q9HBX3 ADGRB1-202ENST00000517894 6241 ntAPPRIS P1 TSL 5 BASIC16.79■□□□□ 0.28
SND1-IT1Q9HBX3 GNPTAB-202ENST00000392919 760 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
SND1-IT1Q9HBX3 SH3GL1-201ENST00000269886 2516 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
SND1-IT1Q9HBX3 UCK1-204ENST00000372215 2167 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
SND1-IT1Q9HBX3 INPP5A-202ENST00000368593 1432 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
SND1-IT1Q9HBX3 MAZ-202ENST00000322945 2532 ntAPPRIS ALT2 TSL 1 (best) BASIC16.78■□□□□ 0.28
SND1-IT1Q9HBX3 MYLIP-202ENST00000356840 1666 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
SND1-IT1Q9HBX3 PRKAR1B-203ENST00000403562 1917 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
SND1-IT1Q9HBX3 CDK2AP1-203ENST00000535979 1281 ntTSL 3 BASIC16.78■□□□□ 0.28
SND1-IT1Q9HBX3 ZNF653-201ENST00000293771 2240 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
SND1-IT1Q9HBX3 PHF20L1-207ENST00000395379 1998 ntTSL 5 BASIC16.78■□□□□ 0.28
SND1-IT1Q9HBX3 MYBL1-204ENST00000522677 5192 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
SND1-IT1Q9HBX3 BIN1-210ENST00000393041 2272 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
SND1-IT1Q9HBX3 ZNF692-201ENST00000306601 1931 ntAPPRIS P3 TSL 1 (best) BASIC16.77■□□□□ 0.28
SND1-IT1Q9HBX3 SLC15A3-201ENST00000227880 2115 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
SND1-IT1Q9HBX3 STUB1-201ENST00000219548 1472 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
SND1-IT1Q9HBX3 PKM-204ENST00000449901 2526 ntTSL 2 BASIC16.77■□□□□ 0.28
SND1-IT1Q9HBX3 ENKD1-201ENST00000243878 1579 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
SND1-IT1Q9HBX3 MPP6-203ENST00000409761 1703 ntTSL 5 BASIC16.76■□□□□ 0.27
SND1-IT1Q9HBX3 OTUD5-203ENST00000396743 2682 ntAPPRIS ALT1 TSL 1 (best) BASIC16.76■□□□□ 0.27
SND1-IT1Q9HBX3 PRELID2-207ENST00000511435 1894 ntAPPRIS ALT1 TSL 2 BASIC16.76■□□□□ 0.27
SND1-IT1Q9HBX3 FSD1-201ENST00000221856 1831 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
SND1-IT1Q9HBX3 LINC01089-207ENST00000538335 630 ntTSL 3 BASIC16.76■□□□□ 0.27
SND1-IT1Q9HBX3 HSF1-204ENST00000528838 2142 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
SND1-IT1Q9HBX3 DNPEP-201ENST00000273075 2425 ntAPPRIS P3 TSL 1 (best) BASIC16.76■□□□□ 0.27
SND1-IT1Q9HBX3 ACSS1-203ENST00000432802 2438 ntTSL 2 BASIC16.76■□□□□ 0.27
SND1-IT1Q9HBX3 FAM66E-202ENST00000533615 2087 ntTSL 2 BASIC16.76■□□□□ 0.27
SND1-IT1Q9HBX3 TOP1MT-208ENST00000519148 1868 ntTSL 2 BASIC16.76■□□□□ 0.27
SND1-IT1Q9HBX3 COMMD3-201ENST00000376836 1342 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
SND1-IT1Q9HBX3 PLEKHA8-201ENST00000258679 2293 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
SND1-IT1Q9HBX3 TNFRSF25-205ENST00000377782 1632 ntAPPRIS P4 TSL 1 (best) BASIC16.75■□□□□ 0.27
SND1-IT1Q9HBX3 ETS1-201ENST00000319397 2231 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
SND1-IT1Q9HBX3 CLPTM1L-201ENST00000320895 2500 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
SND1-IT1Q9HBX3 TOMM40-201ENST00000252487 1707 ntAPPRIS P2 TSL 1 (best) BASIC16.75■□□□□ 0.27
SND1-IT1Q9HBX3 TOMM40-202ENST00000405636 1709 ntAPPRIS P2 TSL 1 (best) BASIC16.75■□□□□ 0.27
SND1-IT1Q9HBX3 MORF4L1-203ENST00000426013 1880 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
SND1-IT1Q9HBX3 P2RY2-202ENST00000393596 2174 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
SND1-IT1Q9HBX3 MXRA7-201ENST00000355797 5661 ntAPPRIS P4 TSL 2 BASIC16.75■□□□□ 0.27
SND1-IT1Q9HBX3 KLF3-AS1-202ENST00000440181 2368 ntTSL 2 BASIC16.74■□□□□ 0.27
SND1-IT1Q9HBX3 KCNQ5-208ENST00000414165 6236 ntTSL 5 BASIC16.74■□□□□ 0.27
SND1-IT1Q9HBX3 HMCES-202ENST00000389735 1763 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
SND1-IT1Q9HBX3 TSKU-201ENST00000333090 2712 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
SND1-IT1Q9HBX3 ZNF639-209ENST00000496856 2033 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
SND1-IT1Q9HBX3 CCNYL1-205ENST00000420822 952 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
SND1-IT1Q9HBX3 RALY-201ENST00000246194 1789 ntAPPRIS P4 TSL 1 (best) BASIC16.73■□□□□ 0.27
SND1-IT1Q9HBX3 RUNX2-203ENST00000371436 1588 ntAPPRIS ALT2 TSL 5 BASIC16.72■□□□□ 0.27
SND1-IT1Q9HBX3 CRIP1-201ENST00000330233 1311 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
SND1-IT1Q9HBX3 MYCL-202ENST00000372816 1688 ntAPPRIS P3 TSL 2 BASIC16.72■□□□□ 0.27
SND1-IT1Q9HBX3 DNMT3A-206ENST00000406659 1775 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
SND1-IT1Q9HBX3 AC091060.1-201ENST00000623524 1766 ntBASIC16.72■□□□□ 0.27
SND1-IT1Q9HBX3 ELOA-201ENST00000418390 5154 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
SND1-IT1Q9HBX3 CCDC160-202ENST00000517294 1790 ntAPPRIS P1 TSL 5 BASIC16.72■□□□□ 0.27
SND1-IT1Q9HBX3 MAP3K3-210ENST00000584573 2480 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
SND1-IT1Q9HBX3 SLC16A11-201ENST00000308009 1803 ntAPPRIS P2 TSL 1 (best) BASIC16.71■□□□□ 0.27
SND1-IT1Q9HBX3 VRK2-202ENST00000412104 1916 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
SND1-IT1Q9HBX3 ATPAF1-201ENST00000329231 1241 ntTSL 2 BASIC16.71■□□□□ 0.27
SND1-IT1Q9HBX3 AC234582.1-201ENST00000447623 923 ntTSL 5 BASIC16.71■□□□□ 0.27
SND1-IT1Q9HBX3 RHOC-208ENST00000369642 1355 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
SND1-IT1Q9HBX3 MAF-202ENST00000393350 6384 ntAPPRIS ALT2 BASIC16.71■□□□□ 0.27
SND1-IT1Q9HBX3 CCDC136-206ENST00000464832 1720 ntAPPRIS ALT2 TSL 5 BASIC16.7■□□□□ 0.26
SND1-IT1Q9HBX3 NXPH4-201ENST00000349394 1804 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
SND1-IT1Q9HBX3 CCDC61-204ENST00000595358 1817 ntAPPRIS P2 TSL 5 BASIC16.7■□□□□ 0.26
SND1-IT1Q9HBX3 BATF3-201ENST00000243440 980 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
SND1-IT1Q9HBX3 LGALS3-201ENST00000254301 1146 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
SND1-IT1Q9HBX3 ATRAID-201ENST00000380171 1240 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
SND1-IT1Q9HBX3 ZDHHC16-207ENST00000393760 2014 ntAPPRIS P4 TSL 1 (best) BASIC16.7■□□□□ 0.26
SND1-IT1Q9HBX3 AC127502.1-201ENST00000399971 1502 ntBASIC16.7■□□□□ 0.26
SND1-IT1Q9HBX3 MISP3-202ENST00000587086 1535 ntAPPRIS P2 TSL 1 (best) BASIC16.7■□□□□ 0.26
SND1-IT1Q9HBX3 DAZAP1-202ENST00000336761 2290 ntTSL 5 BASIC16.7■□□□□ 0.26
SND1-IT1Q9HBX3 EXOSC6-201ENST00000435634 5153 ntAPPRIS P1 BASIC16.69■□□□□ 0.26
Retrieved 100 of 98,524 protein–RNA pairs in 64 ms