Protein–RNA interactions for Protein: Q99853

FOXB1, Forkhead box protein B1, humanhuman

Predictions only

Length 325 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXB1Q99853 DUX4L12-201ENST00000614593 1267 ntBASIC22.39■■□□□ 1.17
FOXB1Q99853 DUX4L14-201ENST00000621227 1267 ntBASIC22.39■■□□□ 1.17
FOXB1Q99853 FAH-213ENST00000561421 1549 ntAPPRIS P1 TSL 1 (best) BASIC22.39■■□□□ 1.17
FOXB1Q99853 SMARCD3-203ENST00000392811 2018 ntTSL 1 (best) BASIC22.39■■□□□ 1.17
FOXB1Q99853 OVOL2-201ENST00000278780 1555 ntAPPRIS P1 TSL 1 (best) BASIC22.38■■□□□ 1.17
FOXB1Q99853 RUNX2-203ENST00000371436 1588 ntAPPRIS ALT2 TSL 5 BASIC22.38■■□□□ 1.17
FOXB1Q99853 TMEM150A-202ENST00000334462 1518 ntAPPRIS P1 TSL 1 (best) BASIC22.38■■□□□ 1.17
FOXB1Q99853 GPR75-ASB3-201ENST00000406625 2113 ntAPPRIS P1 TSL 2 BASIC22.38■■□□□ 1.17
FOXB1Q99853 HS3ST6-201ENST00000454677 1273 ntAPPRIS P1 TSL 1 (best) BASIC22.38■■□□□ 1.17
FOXB1Q99853 U2AF2-206ENST00000590551 1104 ntTSL 3 BASIC22.38■■□□□ 1.17
FOXB1Q99853 MXRA7-203ENST00000449428 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC22.38■■□□□ 1.17
FOXB1Q99853 TBCC-201ENST00000372876 1616 ntAPPRIS P1 BASIC22.38■■□□□ 1.17
FOXB1Q99853 PCK2-202ENST00000396973 1830 ntTSL 1 (best) BASIC22.38■■□□□ 1.17
FOXB1Q99853 AC142086.6-201ENST00000621154 1765 ntBASIC22.38■■□□□ 1.17
FOXB1Q99853 CHML-204ENST00000638121 920 ntTSL 2 BASIC22.37■■□□□ 1.17
FOXB1Q99853 FEZ1-201ENST00000278919 1748 ntAPPRIS P1 TSL 1 (best) BASIC22.37■■□□□ 1.17
FOXB1Q99853 NFYB-205ENST00000551727 1727 ntAPPRIS P1 TSL 3 BASIC22.37■■□□□ 1.17
FOXB1Q99853 GSX1-201ENST00000302945 1663 ntAPPRIS P1 TSL 1 (best) BASIC22.36■■□□□ 1.17
FOXB1Q99853 AP002414.2-202ENST00000590929 1450 ntBASIC22.36■■□□□ 1.17
FOXB1Q99853 C5orf66-AS1-201ENST00000507035 843 ntTSL 2 BASIC22.36■■□□□ 1.17
FOXB1Q99853 CIC-201ENST00000160740 6111 ntAPPRIS ALT1 TSL 5 BASIC22.36■■□□□ 1.17
FOXB1Q99853 MNX1-201ENST00000252971 2174 ntAPPRIS P3 TSL 1 (best) BASIC22.36■■□□□ 1.17
FOXB1Q99853 AC110285.7-201ENST00000624417 1536 ntBASIC22.36■■□□□ 1.17
FOXB1Q99853 HOMER2-202ENST00000450735 1950 ntAPPRIS ALT2 TSL 1 (best) BASIC22.36■■□□□ 1.17
FOXB1Q99853 CDH23-208ENST00000461841 2000 ntTSL 5 BASIC22.35■■□□□ 1.17
FOXB1Q99853 ANKRD16-201ENST00000191063 1567 ntTSL 3 BASIC22.35■■□□□ 1.17
FOXB1Q99853 MTCH1-201ENST00000373616 2006 ntTSL 1 (best) BASIC22.35■■□□□ 1.17
FOXB1Q99853 RHOC-202ENST00000339083 1418 ntAPPRIS P1 TSL 1 (best) BASIC22.34■■□□□ 1.17
FOXB1Q99853 SNX15-202ENST00000377244 1939 ntAPPRIS P1 TSL 1 (best) BASIC22.34■■□□□ 1.17
FOXB1Q99853 EBPL-201ENST00000242827 914 ntAPPRIS P1 TSL 1 (best) BASIC22.34■■□□□ 1.17
FOXB1Q99853 PDCD2-209ENST00000542896 1082 ntTSL 2 BASIC22.34■■□□□ 1.17
FOXB1Q99853 DUX4L13-201ENST00000554103 1267 ntBASIC22.34■■□□□ 1.17
FOXB1Q99853 DUX4L15-201ENST00000611059 1267 ntBASIC22.34■■□□□ 1.17
FOXB1Q99853 DUX4L23-201ENST00000615195 1269 ntBASIC22.34■■□□□ 1.17
FOXB1Q99853 DUX4L24-201ENST00000617576 1269 ntBASIC22.34■■□□□ 1.17
FOXB1Q99853 DUX4L22-201ENST00000618238 1269 ntBASIC22.34■■□□□ 1.17
FOXB1Q99853 DUX4L20-201ENST00000619712 1269 ntBASIC22.34■■□□□ 1.17
FOXB1Q99853 DUX4L21-201ENST00000622058 1269 ntBASIC22.34■■□□□ 1.17
FOXB1Q99853 DUX4L10-201ENST00000622460 1267 ntBASIC22.34■■□□□ 1.17
FOXB1Q99853 DUX4L25-201ENST00000624915 1269 ntBASIC22.34■■□□□ 1.17
FOXB1Q99853 FAM117A-201ENST00000240364 2365 ntAPPRIS P2 TSL 1 (best) BASIC22.34■■□□□ 1.17
FOXB1Q99853 BMP7-204ENST00000450594 1857 ntTSL 2 BASIC22.34■■□□□ 1.17
FOXB1Q99853 NRBF2-202ENST00000435510 1816 ntTSL 2 BASIC22.34■■□□□ 1.17
FOXB1Q99853 TMEM9-201ENST00000367330 1959 ntAPPRIS P3 TSL 1 (best) BASIC22.33■■□□□ 1.17
FOXB1Q99853 TMEM147-202ENST00000392204 935 ntTSL 2 BASIC22.33■■□□□ 1.17
FOXB1Q99853 ZBTB10-204ENST00000455036 5458 ntAPPRIS P3 TSL 2 BASIC22.33■■□□□ 1.16
FOXB1Q99853 RRAD-202ENST00000420652 1476 ntAPPRIS P1 TSL 1 (best) BASIC22.33■■□□□ 1.16
FOXB1Q99853 TSPOAP1-AS1-203ENST00000579527 2042 ntTSL 2 BASIC22.33■■□□□ 1.16
FOXB1Q99853 FOXG1-201ENST00000313071 4890 ntAPPRIS P1 BASIC22.32■■□□□ 1.16
FOXB1Q99853 EMID1-203ENST00000404820 2118 ntTSL 5 BASIC22.32■■□□□ 1.16
FOXB1Q99853 RNF166-209ENST00000567844 633 ntTSL 5 BASIC22.32■■□□□ 1.16
FOXB1Q99853 TMEM187-201ENST00000369982 1880 ntAPPRIS P1 TSL 1 (best) BASIC22.31■■□□□ 1.16
FOXB1Q99853 NXNL1-201ENST00000301944 946 ntAPPRIS P1 TSL 1 (best) BASIC22.31■■□□□ 1.16
FOXB1Q99853 MIR7108-201ENST00000614319 87 ntBASIC22.31■■□□□ 1.16
FOXB1Q99853 HTR6-201ENST00000289753 1984 ntAPPRIS P1 TSL 1 (best) BASIC22.3■■□□□ 1.16
FOXB1Q99853 AGPS-202ENST00000409888 815 ntTSL 4 BASIC22.3■■□□□ 1.16
FOXB1Q99853 TRIM52-AS1-203ENST00000509252 529 ntTSL 3 BASIC22.3■■□□□ 1.16
FOXB1Q99853 MTMR1-214ENST00000542156 1227 ntTSL 1 (best) BASIC22.3■■□□□ 1.16
FOXB1Q99853 TXNL4A-208ENST00000588162 752 ntTSL 2 BASIC22.3■■□□□ 1.16
FOXB1Q99853 AC013394.1-201ENST00000629685 808 ntAPPRIS P1 TSL 5 BASIC22.3■■□□□ 1.16
FOXB1Q99853 C14orf80-203ENST00000354560 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC22.29■■□□□ 1.16
FOXB1Q99853 CLEC3B-202ENST00000428034 752 ntTSL 2 BASIC22.29■■□□□ 1.16
FOXB1Q99853 SSBP3-202ENST00000357475 1533 ntTSL 1 (best) BASIC22.29■■□□□ 1.16
FOXB1Q99853 HOMER3-202ENST00000392351 1557 ntAPPRIS P3 TSL 1 (best) BASIC22.29■■□□□ 1.16
FOXB1Q99853 SERPING1-205ENST00000403558 2231 ntTSL 5 BASIC22.29■■□□□ 1.16
FOXB1Q99853 RANBP1-202ENST00000402752 1132 ntAPPRIS ALT1 TSL 1 (best) BASIC22.28■■□□□ 1.16
FOXB1Q99853 C11orf80-218ENST00000540737 1786 ntAPPRIS ALT2 TSL 2 BASIC22.27■■□□□ 1.16
FOXB1Q99853 SLC35D2-203ENST00000375259 1361 ntTSL 1 (best) BASIC22.27■■□□□ 1.16
FOXB1Q99853 TSPAN3-203ENST00000424443 1530 ntTSL 2 BASIC22.27■■□□□ 1.16
FOXB1Q99853 CAAP1-205ENST00000520187 773 ntTSL 5 BASIC22.27■■□□□ 1.16
FOXB1Q99853 DCDC2C-201ENST00000399143 1476 ntAPPRIS P1 TSL 5 BASIC22.27■■□□□ 1.16
FOXB1Q99853 AURKAIP1-203ENST00000338370 1072 ntAPPRIS P1 TSL 1 (best) BASIC22.26■■□□□ 1.15
FOXB1Q99853 AC187653.1-201ENST00000506382 702 ntAPPRIS P1 TSL 5 BASIC22.26■■□□□ 1.15
FOXB1Q99853 PEX7-203ENST00000541292 945 ntTSL 5 BASIC22.26■■□□□ 1.15
FOXB1Q99853 CHST11-202ENST00000546689 756 ntTSL 2 BASIC22.26■■□□□ 1.15
FOXB1Q99853 SYT12-205ENST00000527043 1661 ntAPPRIS P1 TSL 1 (best) BASIC22.26■■□□□ 1.15
FOXB1Q99853 TCF24-201ENST00000563496 2450 ntAPPRIS P1 TSL 5 BASIC22.25■■□□□ 1.15
FOXB1Q99853 TAZ-201ENST00000369776 1596 ntTSL 1 (best) BASIC22.25■■□□□ 1.15
FOXB1Q99853 C17orf97-201ENST00000360127 1839 ntAPPRIS P2 TSL 1 (best) BASIC22.25■■□□□ 1.15
FOXB1Q99853 MFSD12-202ENST00000389395 2039 ntAPPRIS ALT2 TSL 1 (best) BASIC22.25■■□□□ 1.15
FOXB1Q99853 ING2-201ENST00000302327 1189 ntAPPRIS P1 TSL 1 (best) BASIC22.25■■□□□ 1.15
FOXB1Q99853 DDAH2-212ENST00000375789 1688 ntAPPRIS P1 TSL 2 BASIC22.25■■□□□ 1.15
FOXB1Q99853 DDAH2-213ENST00000375792 1688 ntAPPRIS P1 TSL 1 (best) BASIC22.25■■□□□ 1.15
FOXB1Q99853 P2RX2-203ENST00000350048 1344 ntTSL 1 (best) BASIC22.25■■□□□ 1.15
FOXB1Q99853 BCAP31-201ENST00000345046 1589 ntAPPRIS P1 TSL 1 (best) BASIC22.25■■□□□ 1.15
FOXB1Q99853 SLC16A3-214ENST00000582743 2002 ntAPPRIS P1 TSL 1 (best) BASIC22.24■■□□□ 1.15
FOXB1Q99853 CCDC61-204ENST00000595358 1817 ntAPPRIS P2 TSL 5 BASIC22.24■■□□□ 1.15
FOXB1Q99853 SV2B-203ENST00000545111 2099 ntTSL 2 BASIC22.24■■□□□ 1.15
FOXB1Q99853 AP003068.2-202ENST00000526623 1662 ntTSL 2 BASIC22.24■■□□□ 1.15
FOXB1Q99853 GADD45G-201ENST00000252506 1065 ntAPPRIS P1 TSL 1 (best) BASIC22.24■■□□□ 1.15
FOXB1Q99853 MACF1-219ENST00000484793 834 ntTSL 2 BASIC22.24■■□□□ 1.15
FOXB1Q99853 TMEM200C-201ENST00000383490 1920 ntAPPRIS P1 BASIC22.23■■□□□ 1.15
FOXB1Q99853 ABHD17C-202ENST00000558464 1976 ntTSL 1 (best) BASIC22.23■■□□□ 1.15
FOXB1Q99853 U2AF1-203ENST00000398137 1019 ntTSL 1 (best) BASIC22.23■■□□□ 1.15
FOXB1Q99853 HES6-205ENST00000409356 528 ntTSL 2 BASIC22.23■■□□□ 1.15
FOXB1Q99853 CR559946.2-201ENST00000623684 991 ntBASIC22.23■■□□□ 1.15
FOXB1Q99853 U2AF1L5-212ENST00000639996 1019 ntTSL 1 (best) BASIC22.23■■□□□ 1.15
FOXB1Q99853 TRADD-201ENST00000345057 1877 ntAPPRIS P1 TSL 1 (best) BASIC22.23■■□□□ 1.15
FOXB1Q99853 HSD17B1-201ENST00000225929 1265 ntAPPRIS ALT2 TSL 2 BASIC22.22■■□□□ 1.15
FOXB1Q99853 HIST2H3C-201ENST00000369158 1656 ntAPPRIS P1 BASIC22.22■■□□□ 1.15
Retrieved 100 of 98,524 protein–RNA pairs in 59.3 ms