Protein–RNA interactions for Protein: Q96PC3

AP1S3, AP-1 complex subunit sigma-3, humanhuman

Predictions only

Length 154 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AP1S3Q96PC3 FAM57A-202ENST00000308278 2412 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
AP1S3Q96PC3 H2AFV-202ENST00000308153 752 ntAPPRIS P4 TSL 1 (best) BASIC18.94■□□□□ 0.62
AP1S3Q96PC3 EP300-201ENST00000263253 9587 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
AP1S3Q96PC3 PLEKHG6-206ENST00000536531 1683 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
AP1S3Q96PC3 BAZ1A-202ENST00000360310 6010 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
AP1S3Q96PC3 CLK2-201ENST00000355560 2120 ntAPPRIS ALT1 TSL 5 BASIC18.94■□□□□ 0.62
AP1S3Q96PC3 ANAPC11-203ENST00000392376 687 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
AP1S3Q96PC3 FAM58A-202ENST00000440428 1164 ntAPPRIS P2 TSL 2 BASIC18.93■□□□□ 0.62
AP1S3Q96PC3 MKNK2-202ENST00000309340 1744 ntAPPRIS ALT2 TSL 1 (best) BASIC18.93■□□□□ 0.62
AP1S3Q96PC3 SHD-201ENST00000543264 2577 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
AP1S3Q96PC3 KCNMA1-293ENST00000640969 5789 ntAPPRIS ALT2 TSL 5 BASIC18.92■□□□□ 0.62
AP1S3Q96PC3 SNAI3-AS1-204ENST00000567997 2048 ntBASIC18.92■□□□□ 0.62
AP1S3Q96PC3 AC068152.1-207ENST00000573341 647 ntTSL 2 BASIC18.92■□□□□ 0.62
AP1S3Q96PC3 XYLT1-201ENST00000261381 9891 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
AP1S3Q96PC3 CTU1-201ENST00000421832 2087 ntAPPRIS P1 TSL 2 BASIC18.91■□□□□ 0.62
AP1S3Q96PC3 PEA15-201ENST00000360472 2471 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
AP1S3Q96PC3 SNTB1-202ENST00000517992 2273 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
AP1S3Q96PC3 AHSA2-201ENST00000357022 2437 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
AP1S3Q96PC3 EVC-201ENST00000264956 6431 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
AP1S3Q96PC3 HAND2-201ENST00000359562 2780 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
AP1S3Q96PC3 FLJ37453-201ENST00000317122 2473 ntTSL 2 BASIC18.9■□□□□ 0.62
AP1S3Q96PC3 MAGI2-212ENST00000626691 4599 ntTSL 5 BASIC18.9■□□□□ 0.62
AP1S3Q96PC3 PELI3-203ENST00000524466 1671 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
AP1S3Q96PC3 TP53I13-201ENST00000301057 1530 ntAPPRIS P2 TSL 1 (best) BASIC18.9■□□□□ 0.62
AP1S3Q96PC3 MYO15B-232ENST00000610510 9195 ntAPPRIS P1 TSL 5 BASIC18.89■□□□□ 0.62
AP1S3Q96PC3 ZFAND2B-208ENST00000409594 2021 ntTSL 2 BASIC18.89■□□□□ 0.61
AP1S3Q96PC3 NOP53-201ENST00000246802 1528 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
AP1S3Q96PC3 AGPAT2-202ENST00000371696 1512 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
AP1S3Q96PC3 RCAN1-201ENST00000313806 2490 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
AP1S3Q96PC3 AMZ2-201ENST00000359783 1722 ntTSL 5 BASIC18.88■□□□□ 0.61
AP1S3Q96PC3 GAL3ST1-204ENST00000402369 1712 ntAPPRIS P1 TSL 3 BASIC18.88■□□□□ 0.61
AP1S3Q96PC3 RUNDC3A-201ENST00000225441 1821 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
AP1S3Q96PC3 FSD1L-208ENST00000495708 1906 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
AP1S3Q96PC3 ZSWIM8-220ENST00000604524 5465 ntTSL 5 BASIC18.88■□□□□ 0.61
AP1S3Q96PC3 CAPNS1-204ENST00000587718 1558 ntAPPRIS ALT2 TSL 1 (best) BASIC18.88■□□□□ 0.61
AP1S3Q96PC3 MTURN-201ENST00000324453 5937 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
AP1S3Q96PC3 CPNE1-202ENST00000352393 2147 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
AP1S3Q96PC3 SERPING1-205ENST00000403558 2231 ntTSL 5 BASIC18.87■□□□□ 0.61
AP1S3Q96PC3 PTPRJ-207ENST00000613246 7851 ntAPPRIS ALT2 TSL 5 BASIC18.87■□□□□ 0.61
AP1S3Q96PC3 MAZ-201ENST00000219782 2698 ntAPPRIS P4 TSL 1 (best) BASIC18.87■□□□□ 0.61
AP1S3Q96PC3 TCF24-201ENST00000563496 2450 ntAPPRIS P1 TSL 5 BASIC18.86■□□□□ 0.61
AP1S3Q96PC3 EMILIN2-201ENST00000254528 5910 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
AP1S3Q96PC3 ARTN-201ENST00000372354 1003 ntAPPRIS ALT2 TSL 1 (best) BASIC18.86■□□□□ 0.61
AP1S3Q96PC3 LINC01578-204ENST00000554894 556 ntTSL 3 BASIC18.86■□□□□ 0.61
AP1S3Q96PC3 LINC01578-207ENST00000556895 802 ntTSL 2 BASIC18.86■□□□□ 0.61
AP1S3Q96PC3 MGEA5-205ENST00000439817 5043 ntTSL 5 BASIC18.86■□□□□ 0.61
AP1S3Q96PC3 ABHD17A-202ENST00000292577 1757 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
AP1S3Q96PC3 AC010864.1-201ENST00000609407 1511 ntBASIC18.85■□□□□ 0.61
AP1S3Q96PC3 HRH3-201ENST00000317393 1419 ntAPPRIS ALT2 TSL 1 (best) BASIC18.85■□□□□ 0.61
AP1S3Q96PC3 GTF2IP1-204ENST00000616377 2632 ntTSL 2 BASIC18.85■□□□□ 0.61
AP1S3Q96PC3 ROM1-201ENST00000278833 1878 ntAPPRIS P2 TSL 1 (best) BASIC18.85■□□□□ 0.61
AP1S3Q96PC3 NAPA-201ENST00000263354 1839 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
AP1S3Q96PC3 GALNT13-201ENST00000392825 5536 ntAPPRIS P1 TSL 2 BASIC18.85■□□□□ 0.61
AP1S3Q96PC3 OTUD5-208ENST00000610466 2487 ntTSL 5 BASIC18.84■□□□□ 0.61
AP1S3Q96PC3 ROR1-201ENST00000371079 5832 ntAPPRIS P2 TSL 1 (best) BASIC18.84■□□□□ 0.61
AP1S3Q96PC3 ARTN-211ENST00000498139 1303 ntAPPRIS P4 TSL 1 (best) BASIC18.84■□□□□ 0.61
AP1S3Q96PC3 AC025431.1-201ENST00000559684 874 ntTSL 3 BASIC18.84■□□□□ 0.61
AP1S3Q96PC3 SCCPDH-201ENST00000366510 2503 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
AP1S3Q96PC3 PLEKHF1-201ENST00000436066 2084 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
AP1S3Q96PC3 VEGFC-202ENST00000618562 2064 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
AP1S3Q96PC3 TNIP2-201ENST00000315423 1974 ntAPPRIS P3 TSL 1 (best) BASIC18.84■□□□□ 0.61
AP1S3Q96PC3 PPP3CC-204ENST00000518852 1598 ntTSL 2 BASIC18.84■□□□□ 0.61
AP1S3Q96PC3 MARCH11-201ENST00000332432 1741 ntAPPRIS P1 TSL 5 BASIC18.83■□□□□ 0.61
AP1S3Q96PC3 AUTS2-201ENST00000342771 6173 ntAPPRIS P3 TSL 1 (best) BASIC18.83■□□□□ 0.61
AP1S3Q96PC3 FGFR1-241ENST00000619564 5482 ntTSL 5 BASIC18.83■□□□□ 0.6
AP1S3Q96PC3 THRA-204ENST00000546243 1909 ntAPPRIS P1 TSL 2 BASIC18.83■□□□□ 0.6
AP1S3Q96PC3 BRPF3-202ENST00000357641 6052 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
AP1S3Q96PC3 MAF-203ENST00000569649 1217 ntAPPRIS ALT2 TSL 5 BASIC18.83■□□□□ 0.6
AP1S3Q96PC3 PKM-204ENST00000449901 2526 ntTSL 2 BASIC18.83■□□□□ 0.6
AP1S3Q96PC3 MEF2A-202ENST00000354410 5824 ntAPPRIS P3 TSL 1 (best) BASIC18.83■□□□□ 0.6
AP1S3Q96PC3 RUNX2-205ENST00000465038 1770 ntAPPRIS P4 TSL 5 BASIC18.83■□□□□ 0.6
AP1S3Q96PC3 CACNA1B-204ENST00000371357 9642 ntAPPRIS ALT2 TSL 5 BASIC18.82■□□□□ 0.6
AP1S3Q96PC3 CDC42BPB-201ENST00000361246 6758 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
AP1S3Q96PC3 MAP6D1-202ENST00000431348 890 ntAPPRIS ALT2 TSL 2 BASIC18.82■□□□□ 0.6
AP1S3Q96PC3 FTCD-201ENST00000291670 1905 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
AP1S3Q96PC3 HNRNPAB-205ENST00000506259 1674 ntAPPRIS ALT2 TSL 1 (best) BASIC18.82■□□□□ 0.6
AP1S3Q96PC3 FANCE-201ENST00000229769 2554 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
AP1S3Q96PC3 MAPKAPK2-201ENST00000294981 2171 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
AP1S3Q96PC3 KLF16-203ENST00000592313 508 ntTSL 3 BASIC18.81■□□□□ 0.6
AP1S3Q96PC3 FAM78B-202ENST00000354422 1475 ntAPPRIS P1 TSL 2 BASIC18.81■□□□□ 0.6
AP1S3Q96PC3 TMEM187-201ENST00000369982 1880 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
AP1S3Q96PC3 MORF4L1-202ENST00000379535 2274 ntTSL 2 BASIC18.81■□□□□ 0.6
AP1S3Q96PC3 KHSRP-201ENST00000398148 2993 ntAPPRIS P2 TSL 1 (best) BASIC18.81■□□□□ 0.6
AP1S3Q96PC3 NPAS3-203ENST00000357798 2763 ntAPPRIS ALT2 TSL 1 (best) BASIC18.81■□□□□ 0.6
AP1S3Q96PC3 AL121749.1-202ENST00000609313 2153 ntBASIC18.81■□□□□ 0.6
AP1S3Q96PC3 SNX27-204ENST00000458013 6403 ntAPPRIS ALT1 TSL 5 BASIC18.8■□□□□ 0.6
AP1S3Q96PC3 NRTN-201ENST00000303212 1109 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
AP1S3Q96PC3 SIGMAR1-205ENST00000477726 840 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
AP1S3Q96PC3 AL133380.1-201ENST00000506013 324 ntBASIC18.8■□□□□ 0.6
AP1S3Q96PC3 AL355297.4-201ENST00000603191 1249 ntTSL 3 BASIC18.8■□□□□ 0.6
AP1S3Q96PC3 RMND5A-201ENST00000283632 6301 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
AP1S3Q96PC3 PKD1P6-201ENST00000343738 4769 ntBASIC18.8■□□□□ 0.6
AP1S3Q96PC3 SLC16A3-214ENST00000582743 2002 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
AP1S3Q96PC3 ANKRD53-201ENST00000272421 2185 ntAPPRIS P3 TSL 1 (best) BASIC18.79■□□□□ 0.6
AP1S3Q96PC3 HYAL2-202ENST00000395139 2136 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
AP1S3Q96PC3 EPHA10-202ENST00000373048 5425 ntAPPRIS P2 TSL 5 BASIC18.78■□□□□ 0.6
AP1S3Q96PC3 C1orf122-204ENST00000468084 1234 ntAPPRIS ALT2 TSL 2 BASIC18.78■□□□□ 0.6
AP1S3Q96PC3 WTAP-206ENST00000621533 2109 ntAPPRIS P1 TSL 2 BASIC18.78■□□□□ 0.6
AP1S3Q96PC3 NRXN1-205ENST00000401710 2873 ntTSL 5 BASIC18.78■□□□□ 0.6
AP1S3Q96PC3 KLF9-201ENST00000377126 5175 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Retrieved 100 of 98,524 protein–RNA pairs in 38.7 ms