Protein–RNA interactions for Protein: Q96M98

PACRG, Parkin coregulated gene protein, humanhuman

Predicted RBP Predictions only

Length 296 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PACRGQ96M98 SDCCAG3-201ENST00000298537 2314 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
PACRGQ96M98 KANSL1L-207ENST00000452086 2334 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
PACRGQ96M98 PIK3R2-207ENST00000617130 2187 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
PACRGQ96M98 RAX-201ENST00000256852 2935 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
PACRGQ96M98 GIT1-210ENST00000579937 2798 ntTSL 2 BASIC19.28■□□□□ 0.68
PACRGQ96M98 CACNA1H-210ENST00000638323 8048 ntAPPRIS ALT2 TSL 5 BASIC19.28■□□□□ 0.68
PACRGQ96M98 BSPRY-201ENST00000374183 2339 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
PACRGQ96M98 RUNX2-205ENST00000465038 1770 ntAPPRIS P4 TSL 5 BASIC19.28■□□□□ 0.68
PACRGQ96M98 THRA-201ENST00000264637 2538 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
PACRGQ96M98 MAGI2-201ENST00000354212 6880 ntAPPRIS P3 TSL 1 (best) BASIC19.27■□□□□ 0.68
PACRGQ96M98 FJX1-201ENST00000317811 2450 ntAPPRIS P1 BASIC19.27■□□□□ 0.68
PACRGQ96M98 DTNB-201ENST00000288642 2464 ntAPPRIS ALT2 TSL 2 BASIC19.27■□□□□ 0.67
PACRGQ96M98 FAM43A-201ENST00000329759 2494 ntAPPRIS P1 BASIC19.27■□□□□ 0.67
PACRGQ96M98 DTNB-208ENST00000406818 2474 ntAPPRIS P4 TSL 1 (best) BASIC19.27■□□□□ 0.67
PACRGQ96M98 YAP1-202ENST00000345877 5284 ntTSL 5 BASIC19.27■□□□□ 0.67
PACRGQ96M98 TOP1MT-208ENST00000519148 1868 ntTSL 2 BASIC19.26■□□□□ 0.67
PACRGQ96M98 PELI3-201ENST00000320740 2740 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
PACRGQ96M98 RPL13-202ENST00000393099 2385 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
PACRGQ96M98 AC012676.1-201ENST00000574705 1949 ntBASIC19.26■□□□□ 0.67
PACRGQ96M98 DYRK2-203ENST00000393555 2209 ntAPPRIS ALT1 TSL 1 (best) BASIC19.26■□□□□ 0.67
PACRGQ96M98 PPP2R2D-201ENST00000455566 5738 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
PACRGQ96M98 FRMD8-203ENST00000416776 1818 ntTSL 2 BASIC19.25■□□□□ 0.67
PACRGQ96M98 SP5-201ENST00000375281 2033 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
PACRGQ96M98 PCSK6-220ENST00000622483 3132 ntAPPRIS ALT2 TSL 1 (best) BASIC19.25■□□□□ 0.67
PACRGQ96M98 GRAMD1A-201ENST00000317991 2695 ntAPPRIS P3 TSL 1 (best) BASIC19.25■□□□□ 0.67
PACRGQ96M98 NDEL1-201ENST00000334527 2372 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
PACRGQ96M98 CLDN5-201ENST00000403084 2357 ntBASIC19.25■□□□□ 0.67
PACRGQ96M98 PPP1CC-202ENST00000340766 1472 ntTSL 2 BASIC19.25■□□□□ 0.67
PACRGQ96M98 DTNB-211ENST00000407661 2420 ntAPPRIS ALT1 TSL 1 (best) BASIC19.25■□□□□ 0.67
PACRGQ96M98 EGR4-201ENST00000436467 2377 ntAPPRIS ALT2 TSL 1 (best) BASIC19.25■□□□□ 0.67
PACRGQ96M98 RAB26-201ENST00000210187 1675 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
PACRGQ96M98 CPNE1-203ENST00000397442 1695 ntTSL 5 BASIC19.24■□□□□ 0.67
PACRGQ96M98 ID4-201ENST00000378700 2344 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
PACRGQ96M98 FTCD-201ENST00000291670 1905 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
PACRGQ96M98 AP2M1-202ENST00000382456 2091 ntAPPRIS ALT1 TSL 1 (best) BASIC19.24■□□□□ 0.67
PACRGQ96M98 HAS1-205ENST00000601714 2086 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
PACRGQ96M98 TRIM28-202ENST00000341753 2709 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
PACRGQ96M98 IRAK1-205ENST00000429936 2127 ntTSL 5 BASIC19.23■□□□□ 0.67
PACRGQ96M98 AL136373.1-201ENST00000634804 1449 ntAPPRIS P1 BASIC19.23■□□□□ 0.67
PACRGQ96M98 ATMIN-201ENST00000299575 4884 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
PACRGQ96M98 TARSL2-207ENST00000615656 2356 ntAPPRIS ALT2 TSL 5 BASIC19.22■□□□□ 0.67
PACRGQ96M98 THRA-209ENST00000584985 2421 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
PACRGQ96M98 ALG2-203ENST00000476832 1880 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
PACRGQ96M98 EXOSC6-201ENST00000435634 5153 ntAPPRIS P1 BASIC19.21■□□□□ 0.67
PACRGQ96M98 FBXW4-201ENST00000331272 2483 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
PACRGQ96M98 SLAIN1-213ENST00000466548 2637 ntAPPRIS ALT2 TSL 5 BASIC19.21■□□□□ 0.67
PACRGQ96M98 ALG1L9P-201ENST00000508969 2165 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
PACRGQ96M98 PCSK6-215ENST00000611967 3336 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
PACRGQ96M98 FOXP4-203ENST00000373060 5948 ntTSL 5 BASIC19.2■□□□□ 0.66
PACRGQ96M98 FOXP4-204ENST00000373063 5910 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
PACRGQ96M98 SHOX2-201ENST00000389589 2072 ntAPPRIS P3 TSL 1 (best) BASIC19.2■□□□□ 0.66
PACRGQ96M98 HAGHL-204ENST00000549114 1820 ntTSL 5 BASIC19.2■□□□□ 0.66
PACRGQ96M98 FCRLB-205ENST00000367948 1977 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
PACRGQ96M98 KAT8-206ENST00000543774 1846 ntAPPRIS P1 TSL 5 BASIC19.19■□□□□ 0.66
PACRGQ96M98 RAX2-202ENST00000555978 2145 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
PACRGQ96M98 BRSK2-212ENST00000531197 3163 ntAPPRIS ALT2 TSL 1 (best) BASIC19.19■□□□□ 0.66
PACRGQ96M98 SLC12A2-201ENST00000262461 6885 ntAPPRIS P3 TSL 1 (best) BASIC19.18■□□□□ 0.66
PACRGQ96M98 SRR-201ENST00000344595 2728 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
PACRGQ96M98 YAP1-210ENST00000615667 5398 ntAPPRIS ALT2 TSL 5 BASIC19.18■□□□□ 0.66
PACRGQ96M98 IL17RE-203ENST00000421412 2158 ntAPPRIS ALT2 TSL 1 (best) BASIC19.17■□□□□ 0.66
PACRGQ96M98 RDX-210ENST00000530301 1549 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
PACRGQ96M98 INO80B-201ENST00000233331 1261 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
PACRGQ96M98 NR6A1-203ENST00000416460 1898 ntAPPRIS ALT2 TSL 1 (best) BASIC19.17■□□□□ 0.66
PACRGQ96M98 VRK2-202ENST00000412104 1916 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
PACRGQ96M98 NFKBIA-209ENST00000557389 1537 ntTSL 2 BASIC19.16■□□□□ 0.66
PACRGQ96M98 FEZ2-203ENST00000379245 2097 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
PACRGQ96M98 AL135925.1-201ENST00000605920 1701 ntBASIC19.16■□□□□ 0.66
PACRGQ96M98 MAF-202ENST00000393350 6384 ntAPPRIS ALT2 BASIC19.16■□□□□ 0.66
PACRGQ96M98 LRRC61-202ENST00000359623 1877 ntAPPRIS P1 TSL 2 BASIC19.16■□□□□ 0.66
PACRGQ96M98 PEX5-205ENST00000420616 2477 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
PACRGQ96M98 PLD4-201ENST00000392593 6515 ntAPPRIS P3 TSL 1 (best) BASIC19.15■□□□□ 0.66
PACRGQ96M98 CMTM4-202ENST00000394106 1187 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
PACRGQ96M98 CMTM4-204ENST00000563952 1023 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
PACRGQ96M98 HABP4-202ENST00000375251 2304 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
PACRGQ96M98 AC079834.2-201ENST00000609776 1949 ntBASIC19.15■□□□□ 0.66
PACRGQ96M98 RUNX2-203ENST00000371436 1588 ntAPPRIS ALT2 TSL 5 BASIC19.15■□□□□ 0.66
PACRGQ96M98 HDHD5-202ENST00000336737 1799 ntAPPRIS ALT2 TSL 1 (best) BASIC19.14■□□□□ 0.66
PACRGQ96M98 FOXO1-201ENST00000379561 5735 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
PACRGQ96M98 CACNA1H-202ENST00000358590 8069 ntAPPRIS ALT2 TSL 5 BASIC19.14■□□□□ 0.65
PACRGQ96M98 ZFAND2B-208ENST00000409594 2021 ntTSL 2 BASIC19.14■□□□□ 0.65
PACRGQ96M98 AC145676.1-201ENST00000514988 2004 ntBASIC19.14■□□□□ 0.65
PACRGQ96M98 FAM107B-211ENST00000468747 2633 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
PACRGQ96M98 C11orf63-201ENST00000227349 3147 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
PACRGQ96M98 TMEM150C-201ENST00000449862 1990 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
PACRGQ96M98 HOMER2-202ENST00000450735 1950 ntAPPRIS ALT2 TSL 1 (best) BASIC19.13■□□□□ 0.65
PACRGQ96M98 UNCX-201ENST00000316333 2048 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
PACRGQ96M98 DRD4-201ENST00000176183 1375 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
PACRGQ96M98 CNIH2-203ENST00000528852 1524 ntAPPRIS ALT1 TSL 1 (best) BASIC19.13■□□□□ 0.65
PACRGQ96M98 ARRDC1-201ENST00000371421 1586 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
PACRGQ96M98 AGBL5-201ENST00000323064 2382 ntAPPRIS ALT2 TSL 1 (best) BASIC19.13■□□□□ 0.65
PACRGQ96M98 CBLN2-209ENST00000585159 2406 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
PACRGQ96M98 FAM83D-202ENST00000619850 2361 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
PACRGQ96M98 PCOLCE2-201ENST00000295992 2021 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
PACRGQ96M98 SNF8-202ENST00000502492 2319 ntAPPRIS P3 TSL 1 (best) BASIC19.11■□□□□ 0.65
PACRGQ96M98 CPOX-201ENST00000264193 2825 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
PACRGQ96M98 ACAA1-220ENST00000627515 1862 ntTSL 5 BASIC19.11■□□□□ 0.65
PACRGQ96M98 POLR2J2-202ENST00000358438 2065 ntAPPRIS ALT2 TSL 1 (best) BASIC19.1■□□□□ 0.65
PACRGQ96M98 POLR2J3-220ENST00000613744 2096 ntAPPRIS ALT2 TSL 1 (best) BASIC19.1■□□□□ 0.65
PACRGQ96M98 SLBP-206ENST00000489418 1977 ntAPPRIS P2 TSL 1 (best) BASIC19.1■□□□□ 0.65
PACRGQ96M98 PCYT2-205ENST00000570391 1857 ntTSL 2 BASIC19.1■□□□□ 0.65
Retrieved 100 of 98,524 protein–RNA pairs in 68.5 ms