Protein–RNA interactions for Protein: Q8NC44

RETREG2, Reticulophagy regulator 2, humanhuman

Predictions only

Length 543 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RETREG2Q8NC44 ARHGAP22-202ENST00000374170 2107 ntTSL 5 BASIC28.82■■■□□ 2.2
RETREG2Q8NC44 TOMM40-201ENST00000252487 1707 ntAPPRIS P2 TSL 1 (best) BASIC28.81■■■□□ 2.2
RETREG2Q8NC44 TOMM40-202ENST00000405636 1709 ntAPPRIS P2 TSL 1 (best) BASIC28.81■■■□□ 2.2
RETREG2Q8NC44 MAP3K8-203ENST00000375322 932 ntTSL 2 BASIC28.81■■■□□ 2.2
RETREG2Q8NC44 AC073111.5-206ENST00000642087 859 ntAPPRIS P1 BASIC28.81■■■□□ 2.2
RETREG2Q8NC44 ITGA9-203ENST00000422441 2282 ntTSL 1 (best) BASIC28.81■■■□□ 2.2
RETREG2Q8NC44 GRK6-206ENST00000507633 1660 ntTSL 5 BASIC28.8■■■□□ 2.2
RETREG2Q8NC44 COQ2-202ENST00000311469 1641 ntAPPRIS P2 TSL 1 (best) BASIC28.8■■■□□ 2.2
RETREG2Q8NC44 PQLC1-203ENST00000397778 2555 ntAPPRIS P3 TSL 1 (best) BASIC28.8■■■□□ 2.2
RETREG2Q8NC44 AC127502.1-201ENST00000399971 1502 ntBASIC28.79■■■□□ 2.2
RETREG2Q8NC44 FSD1L-208ENST00000495708 1906 ntTSL 1 (best) BASIC28.79■■■□□ 2.2
RETREG2Q8NC44 RASSF8-202ENST00000381352 2320 ntTSL 1 (best) BASIC28.79■■■□□ 2.2
RETREG2Q8NC44 RUNX2-211ENST00000625924 1458 ntAPPRIS ALT2 TSL 1 (best) BASIC28.78■■■□□ 2.2
RETREG2Q8NC44 SLC30A10-202ENST00000366926 1915 ntAPPRIS P1 TSL 1 (best) BASIC28.78■■■□□ 2.2
RETREG2Q8NC44 HNRNPAB-205ENST00000506259 1674 ntAPPRIS ALT2 TSL 1 (best) BASIC28.77■■■□□ 2.2
RETREG2Q8NC44 TMEM9-201ENST00000367330 1959 ntAPPRIS P3 TSL 1 (best) BASIC28.77■■■□□ 2.2
RETREG2Q8NC44 RNF126P1-201ENST00000567452 1320 ntBASIC28.77■■■□□ 2.2
RETREG2Q8NC44 IL17D-201ENST00000304920 1861 ntAPPRIS P1 TSL 1 (best) BASIC28.77■■■□□ 2.2
RETREG2Q8NC44 CEP120-209ENST00000515110 606 ntTSL 3 BASIC28.77■■■□□ 2.2
RETREG2Q8NC44 GADD45A-205ENST00000617962 1142 ntTSL 1 (best) BASIC28.77■■■□□ 2.2
RETREG2Q8NC44 CBWD5-202ENST00000377384 1347 ntTSL 1 (best) BASIC28.76■■■□□ 2.19
RETREG2Q8NC44 S1PR4-201ENST00000246115 1565 ntAPPRIS P1 BASIC28.75■■■□□ 2.19
RETREG2Q8NC44 MAPK3-205ENST00000395202 1008 ntTSL 1 (best) BASIC28.75■■■□□ 2.19
RETREG2Q8NC44 U2AF1-203ENST00000398137 1019 ntTSL 1 (best) BASIC28.75■■■□□ 2.19
RETREG2Q8NC44 BLOC1S3-202ENST00000587722 732 ntAPPRIS P1 BASIC28.75■■■□□ 2.19
RETREG2Q8NC44 U2AF1L5-212ENST00000639996 1019 ntTSL 1 (best) BASIC28.75■■■□□ 2.19
RETREG2Q8NC44 PDPK1-203ENST00000389224 2416 ntTSL 2 BASIC28.75■■■□□ 2.19
RETREG2Q8NC44 RDX-210ENST00000530301 1549 ntTSL 1 (best) BASIC28.74■■■□□ 2.19
RETREG2Q8NC44 SURF1-201ENST00000371974 1093 ntAPPRIS P1 TSL 1 (best) BASIC28.74■■■□□ 2.19
RETREG2Q8NC44 SURF1-205ENST00000615505 991 ntTSL 1 (best) BASIC28.74■■■□□ 2.19
RETREG2Q8NC44 CFAP73-201ENST00000335621 1514 ntAPPRIS P1 TSL 5 BASIC28.74■■■□□ 2.19
RETREG2Q8NC44 FGF18-201ENST00000274625 1986 ntAPPRIS P1 TSL 1 (best) BASIC28.73■■■□□ 2.19
RETREG2Q8NC44 MKNK2-202ENST00000309340 1744 ntAPPRIS ALT2 TSL 1 (best) BASIC28.73■■■□□ 2.19
RETREG2Q8NC44 TESK1-201ENST00000336395 2421 ntAPPRIS P1 TSL 1 (best) BASIC28.73■■■□□ 2.19
RETREG2Q8NC44 YAP1-204ENST00000526343 2393 ntTSL 5 BASIC28.72■■■□□ 2.19
RETREG2Q8NC44 BANF1-208ENST00000533166 1135 ntAPPRIS P1 TSL 2 BASIC28.72■■■□□ 2.19
RETREG2Q8NC44 C16orf95-206ENST00000618367 974 ntAPPRIS ALT2 TSL 2 BASIC28.72■■■□□ 2.19
RETREG2Q8NC44 DPF1-202ENST00000412732 2303 ntTSL 1 (best) BASIC28.7■■■□□ 2.19
RETREG2Q8NC44 IGFBP2-201ENST00000233809 1439 ntAPPRIS P1 TSL 1 (best) BASIC28.69■■■□□ 2.18
RETREG2Q8NC44 RPRML-201ENST00000322329 1093 ntAPPRIS P1 BASIC28.69■■■□□ 2.18
RETREG2Q8NC44 C1orf122-201ENST00000373042 973 ntAPPRIS P3 TSL 1 (best) BASIC28.69■■■□□ 2.18
RETREG2Q8NC44 AGO3-204ENST00000397828 1035 ntTSL 2 BASIC28.69■■■□□ 2.18
RETREG2Q8NC44 IRX1-201ENST00000302006 1858 ntAPPRIS P1 TSL 1 (best) BASIC28.69■■■□□ 2.18
RETREG2Q8NC44 COL13A1-214ENST00000522165 2061 ntAPPRIS ALT2 TSL 5 BASIC28.68■■■□□ 2.18
RETREG2Q8NC44 TSPAN4-207ENST00000397411 1025 ntAPPRIS P1 TSL 2 BASIC28.67■■■□□ 2.18
RETREG2Q8NC44 ELOC-207ENST00000522337 816 ntAPPRIS P1 TSL 2 BASIC28.67■■■□□ 2.18
RETREG2Q8NC44 PLSCR3-209ENST00000574401 2032 ntAPPRIS P1 TSL 1 (best) BASIC28.67■■■□□ 2.18
RETREG2Q8NC44 TMEM147-202ENST00000392204 935 ntTSL 2 BASIC28.66■■■□□ 2.18
RETREG2Q8NC44 HSD17B12-202ENST00000395700 994 ntTSL 1 (best) BASIC28.66■■■□□ 2.18
RETREG2Q8NC44 BAX-202ENST00000345358 793 ntAPPRIS P1 TSL 1 (best) BASIC28.65■■■□□ 2.18
RETREG2Q8NC44 NPC2-207ENST00000555619 1035 ntAPPRIS P2 TSL 1 (best) BASIC28.65■■■□□ 2.18
RETREG2Q8NC44 C1QTNF8-201ENST00000328449 1627 ntAPPRIS P1 TSL 5 BASIC28.65■■■□□ 2.18
RETREG2Q8NC44 ADAT3-201ENST00000329478 1620 ntAPPRIS P1 TSL 1 (best) BASIC28.65■■■□□ 2.18
RETREG2Q8NC44 COL13A1-213ENST00000520267 2276 ntAPPRIS ALT2 TSL 5 BASIC28.64■■■□□ 2.18
RETREG2Q8NC44 SSTR4-201ENST00000255008 1427 ntAPPRIS P1 BASIC28.64■■■□□ 2.18
RETREG2Q8NC44 AC022413.1-201ENST00000624602 984 ntBASIC28.64■■■□□ 2.18
RETREG2Q8NC44 HDGF-210ENST00000537739 2073 ntAPPRIS P1 TSL 1 (best) BASIC28.64■■■□□ 2.18
RETREG2Q8NC44 RUNX2-205ENST00000465038 1770 ntAPPRIS P4 TSL 5 BASIC28.64■■■□□ 2.18
RETREG2Q8NC44 BCL7C-201ENST00000215115 1740 ntAPPRIS P1 TSL 1 (best) BASIC28.63■■■□□ 2.17
RETREG2Q8NC44 AC135983.2-203ENST00000454486 1613 ntBASIC28.63■■■□□ 2.17
RETREG2Q8NC44 AP003068.2-202ENST00000526623 1662 ntTSL 2 BASIC28.63■■■□□ 2.17
RETREG2Q8NC44 DCUN1D5-201ENST00000260247 1337 ntAPPRIS P1 TSL 1 (best) BASIC28.63■■■□□ 2.17
RETREG2Q8NC44 TSPOAP1-AS1-203ENST00000579527 2042 ntTSL 2 BASIC28.62■■■□□ 2.17
RETREG2Q8NC44 ZNF787-203ENST00000610935 1925 ntAPPRIS P1 TSL 1 (best) BASIC28.62■■■□□ 2.17
RETREG2Q8NC44 MTCH1-202ENST00000373627 2057 ntAPPRIS P1 TSL 1 (best) BASIC28.62■■■□□ 2.17
RETREG2Q8NC44 ADAP1-201ENST00000265846 2363 ntAPPRIS P1 TSL 1 (best) BASIC28.61■■■□□ 2.17
RETREG2Q8NC44 C2orf88-204ENST00000409870 1441 ntAPPRIS P1 TSL 2 BASIC28.61■■■□□ 2.17
RETREG2Q8NC44 SHARPIN-202ENST00000398712 1765 ntAPPRIS P1 TSL 1 (best) BASIC28.61■■■□□ 2.17
RETREG2Q8NC44 LINC01896-206ENST00000575722 1256 ntTSL 2 BASIC28.61■■■□□ 2.17
RETREG2Q8NC44 PLSCR3-202ENST00000535512 2067 ntAPPRIS P1 TSL 1 (best) BASIC28.61■■■□□ 2.17
RETREG2Q8NC44 SPATA5L1-208ENST00000638607 1863 ntTSL 2 BASIC28.61■■■□□ 2.17
RETREG2Q8NC44 HOXB3-212ENST00000498678 2196 ntAPPRIS P1 TSL 2 BASIC28.61■■■□□ 2.17
RETREG2Q8NC44 THAP11-201ENST00000303596 2114 ntAPPRIS P1 BASIC28.6■■■□□ 2.17
RETREG2Q8NC44 AC008813.1-201ENST00000536597 885 ntBASIC28.6■■■□□ 2.17
RETREG2Q8NC44 C16orf74-204ENST00000602719 1002 ntAPPRIS ALT2 TSL 3 BASIC28.6■■■□□ 2.17
RETREG2Q8NC44 EXOC3-209ENST00000512944 2825 ntAPPRIS P1 TSL 1 (best) BASIC28.6■■■□□ 2.17
RETREG2Q8NC44 AC142086.6-201ENST00000621154 1765 ntBASIC28.6■■■□□ 2.17
RETREG2Q8NC44 COL13A1-203ENST00000398969 2267 ntAPPRIS ALT2 TSL 5 BASIC28.59■■■□□ 2.17
RETREG2Q8NC44 AL139393.2-201ENST00000608721 2025 ntBASIC28.59■■■□□ 2.17
RETREG2Q8NC44 FAAH-201ENST00000243167 2094 ntAPPRIS P1 TSL 1 (best) BASIC28.59■■■□□ 2.17
RETREG2Q8NC44 HES4-202ENST00000428771 1040 ntTSL 2 BASIC28.59■■■□□ 2.17
RETREG2Q8NC44 RPARP-AS1-205ENST00000596045 431 ntTSL 3 BASIC28.59■■■□□ 2.17
RETREG2Q8NC44 C16orf59-202ENST00000483320 1709 ntAPPRIS ALT2 TSL 2 BASIC28.59■■■□□ 2.17
RETREG2Q8NC44 ARPC5L-202ENST00000353214 2507 ntAPPRIS P1 TSL 2 BASIC28.59■■■□□ 2.17
RETREG2Q8NC44 CCND3-203ENST00000372991 2085 ntAPPRIS P1 TSL 1 (best) BASIC28.58■■■□□ 2.17
RETREG2Q8NC44 WHAMMP2-203ENST00000563942 1603 ntBASIC28.58■■■□□ 2.17
RETREG2Q8NC44 MORF4L1-203ENST00000426013 1880 ntAPPRIS P1 TSL 1 (best) BASIC28.58■■■□□ 2.17
RETREG2Q8NC44 KCTD5-202ENST00000564195 774 ntTSL 5 BASIC28.58■■■□□ 2.17
RETREG2Q8NC44 MDFIC-208ENST00000614186 1068 ntTSL 1 (best) BASIC28.58■■■□□ 2.17
RETREG2Q8NC44 UBAC1-201ENST00000371756 1867 ntAPPRIS P1 TSL 1 (best) BASIC28.57■■■□□ 2.16
RETREG2Q8NC44 BOK-AS1-201ENST00000434306 643 ntTSL 1 (best) BASIC28.57■■■□□ 2.16
RETREG2Q8NC44 HSD11B1L-202ENST00000339423 1660 ntAPPRIS P3 TSL 1 (best) BASIC28.57■■■□□ 2.16
RETREG2Q8NC44 BMP7-204ENST00000450594 1857 ntTSL 2 BASIC28.57■■■□□ 2.16
RETREG2Q8NC44 MTCH1-201ENST00000373616 2006 ntTSL 1 (best) BASIC28.56■■■□□ 2.16
RETREG2Q8NC44 LINC01918-201ENST00000436841 797 ntTSL 2 BASIC28.55■■■□□ 2.16
RETREG2Q8NC44 ACTR3B-201ENST00000256001 2216 ntAPPRIS P1 TSL 1 (best) BASIC28.55■■■□□ 2.16
RETREG2Q8NC44 RAD51-210ENST00000557850 1397 ntTSL 2 BASIC28.54■■■□□ 2.16
RETREG2Q8NC44 ATF4-201ENST00000337304 2019 ntAPPRIS P1 TSL 1 (best) BASIC28.54■■■□□ 2.16
RETREG2Q8NC44 KIF13A-207ENST00000502704 1330 ntTSL 1 (best) BASIC28.54■■■□□ 2.16
RETREG2Q8NC44 TAF10-201ENST00000299424 1215 ntAPPRIS P1 TSL 1 (best) BASIC28.54■■■□□ 2.16
Retrieved 100 of 98,524 protein–RNA pairs in 22 ms