Protein–RNA interactions for Protein: Q8N112

LSMEM2, Leucine-rich single-pass membrane protein 2, humanhuman

Predictions only

Length 164 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LSMEM2Q8N112 C11orf80-204ENST00000525908 2135 ntAPPRIS P3 TSL 2 BASIC25.4■■□□□ 1.66
LSMEM2Q8N112 POLR1D-201ENST00000302979 1166 ntAPPRIS P2 TSL 1 (best) BASIC25.4■■□□□ 1.66
LSMEM2Q8N112 PPP4R4-202ENST00000328839 876 ntTSL 1 (best) BASIC25.4■■□□□ 1.66
LSMEM2Q8N112 EIF5A-208ENST00000573542 1089 ntAPPRIS P1 TSL 2 BASIC25.4■■□□□ 1.66
LSMEM2Q8N112 QDPR-201ENST00000281243 1648 ntAPPRIS P1 TSL 1 (best) BASIC25.4■■□□□ 1.66
LSMEM2Q8N112 FTCD-201ENST00000291670 1905 ntAPPRIS P1 TSL 1 (best) BASIC25.39■■□□□ 1.66
LSMEM2Q8N112 PPP1CC-208ENST00000551676 1581 ntTSL 2 BASIC25.37■■□□□ 1.65
LSMEM2Q8N112 ANKS1B-203ENST00000341752 2115 ntTSL 2 BASIC25.36■■□□□ 1.65
LSMEM2Q8N112 CARM1-202ENST00000344150 2722 ntAPPRIS ALT2 TSL 5 BASIC25.35■■□□□ 1.65
LSMEM2Q8N112 PTPRF-216ENST00000617451 1129 ntTSL 5 BASIC25.35■■□□□ 1.65
LSMEM2Q8N112 GNAS-211ENST00000371095 1931 ntAPPRIS ALT1 TSL 1 (best) BASIC25.35■■□□□ 1.65
LSMEM2Q8N112 TMEM55B-201ENST00000250489 1961 ntAPPRIS P3 TSL 1 (best) BASIC25.35■■□□□ 1.65
LSMEM2Q8N112 ROM1-201ENST00000278833 1878 ntAPPRIS P2 TSL 1 (best) BASIC25.34■■□□□ 1.65
LSMEM2Q8N112 EBPL-201ENST00000242827 914 ntAPPRIS P1 TSL 1 (best) BASIC25.34■■□□□ 1.65
LSMEM2Q8N112 DUX4L13-201ENST00000554103 1267 ntBASIC25.34■■□□□ 1.65
LSMEM2Q8N112 DUX4L15-201ENST00000611059 1267 ntBASIC25.34■■□□□ 1.65
LSMEM2Q8N112 DUX4L23-201ENST00000615195 1269 ntBASIC25.34■■□□□ 1.65
LSMEM2Q8N112 DUX4L24-201ENST00000617576 1269 ntBASIC25.34■■□□□ 1.65
LSMEM2Q8N112 DUX4L22-201ENST00000618238 1269 ntBASIC25.34■■□□□ 1.65
LSMEM2Q8N112 DUX4L20-201ENST00000619712 1269 ntBASIC25.34■■□□□ 1.65
LSMEM2Q8N112 DUX4L21-201ENST00000622058 1269 ntBASIC25.34■■□□□ 1.65
LSMEM2Q8N112 DUX4L10-201ENST00000622460 1267 ntBASIC25.34■■□□□ 1.65
LSMEM2Q8N112 DUX4L25-201ENST00000624915 1269 ntBASIC25.34■■□□□ 1.65
LSMEM2Q8N112 GNAS-207ENST00000354359 1975 ntTSL 1 (best) BASIC25.34■■□□□ 1.65
LSMEM2Q8N112 GNAS-210ENST00000371085 1972 ntTSL 1 (best) BASIC25.34■■□□□ 1.65
LSMEM2Q8N112 SLC16A3-214ENST00000582743 2002 ntAPPRIS P1 TSL 1 (best) BASIC25.34■■□□□ 1.65
LSMEM2Q8N112 AL121749.1-202ENST00000609313 2153 ntBASIC25.34■■□□□ 1.65
LSMEM2Q8N112 MYLIP-202ENST00000356840 1666 ntAPPRIS P1 TSL 1 (best) BASIC25.33■■□□□ 1.65
LSMEM2Q8N112 DTNBP1-202ENST00000344537 1403 ntAPPRIS P1 TSL 1 (best) BASIC25.33■■□□□ 1.65
LSMEM2Q8N112 BCL7B-202ENST00000411832 1458 ntTSL 2 BASIC25.33■■□□□ 1.65
LSMEM2Q8N112 WTAP-206ENST00000621533 2109 ntAPPRIS P1 TSL 2 BASIC25.33■■□□□ 1.64
LSMEM2Q8N112 TNIP2-201ENST00000315423 1974 ntAPPRIS P3 TSL 1 (best) BASIC25.33■■□□□ 1.64
LSMEM2Q8N112 F8A3-201ENST00000622749 1759 ntAPPRIS P1 BASIC25.32■■□□□ 1.64
LSMEM2Q8N112 RANBP1-202ENST00000402752 1132 ntAPPRIS ALT1 TSL 1 (best) BASIC25.32■■□□□ 1.64
LSMEM2Q8N112 UBALD1-203ENST00000587649 707 ntTSL 3 BASIC25.32■■□□□ 1.64
LSMEM2Q8N112 GRK6-206ENST00000507633 1660 ntTSL 5 BASIC25.32■■□□□ 1.64
LSMEM2Q8N112 ARL6IP4-211ENST00000454885 1318 ntAPPRIS ALT2 TSL 1 (best) BASIC25.32■■□□□ 1.64
LSMEM2Q8N112 VEGFC-202ENST00000618562 2064 ntAPPRIS P1 TSL 1 (best) BASIC25.32■■□□□ 1.64
LSMEM2Q8N112 ENKD1-201ENST00000243878 1579 ntAPPRIS P1 TSL 1 (best) BASIC25.31■■□□□ 1.64
LSMEM2Q8N112 CDH23-208ENST00000461841 2000 ntTSL 5 BASIC25.31■■□□□ 1.64
LSMEM2Q8N112 U2AF1-201ENST00000291552 962 ntAPPRIS P3 TSL 1 (best) BASIC25.31■■□□□ 1.64
LSMEM2Q8N112 AC018755.3-201ENST00000598755 664 ntTSL 2 BASIC25.31■■□□□ 1.64
LSMEM2Q8N112 U2AF1L5-202ENST00000619610 813 ntAPPRIS ALT2 TSL 1 (best) BASIC25.31■■□□□ 1.64
LSMEM2Q8N112 KLC2-205ENST00000394078 1557 ntTSL 5 BASIC25.31■■□□□ 1.64
LSMEM2Q8N112 CAPNS1-204ENST00000587718 1558 ntAPPRIS ALT2 TSL 1 (best) BASIC25.31■■□□□ 1.64
LSMEM2Q8N112 HDGF-201ENST00000357325 2380 ntAPPRIS P1 TSL 1 (best) BASIC25.3■■□□□ 1.64
LSMEM2Q8N112 MAD2L2-207ENST00000376692 1118 ntAPPRIS P1 TSL 1 (best) BASIC25.3■■□□□ 1.64
LSMEM2Q8N112 METRNL-202ENST00000570778 967 ntTSL 5 BASIC25.3■■□□□ 1.64
LSMEM2Q8N112 TNFRSF25-204ENST00000356876 1625 ntAPPRIS ALT2 TSL 1 (best) BASIC25.3■■□□□ 1.64
LSMEM2Q8N112 TMEM187-201ENST00000369982 1880 ntAPPRIS P1 TSL 1 (best) BASIC25.3■■□□□ 1.64
LSMEM2Q8N112 TOMM40-201ENST00000252487 1707 ntAPPRIS P2 TSL 1 (best) BASIC25.29■■□□□ 1.64
LSMEM2Q8N112 TOMM40-202ENST00000405636 1709 ntAPPRIS P2 TSL 1 (best) BASIC25.29■■□□□ 1.64
LSMEM2Q8N112 RRAD-202ENST00000420652 1476 ntAPPRIS P1 TSL 1 (best) BASIC25.28■■□□□ 1.64
LSMEM2Q8N112 FLJ37453-201ENST00000317122 2473 ntTSL 2 BASIC25.28■■□□□ 1.64
LSMEM2Q8N112 SLC16A8-201ENST00000320521 1878 ntAPPRIS P1 TSL 1 (best) BASIC25.28■■□□□ 1.64
LSMEM2Q8N112 THRA-204ENST00000546243 1909 ntAPPRIS P1 TSL 2 BASIC25.28■■□□□ 1.64
LSMEM2Q8N112 MRPL51-201ENST00000229238 1234 ntAPPRIS P1 TSL 1 (best) BASIC25.28■■□□□ 1.64
LSMEM2Q8N112 IHH-201ENST00000295731 2023 ntAPPRIS P1 TSL 1 (best) BASIC25.28■■□□□ 1.64
LSMEM2Q8N112 RHEB-201ENST00000262187 2075 ntAPPRIS P1 TSL 1 (best) BASIC25.28■■□□□ 1.64
LSMEM2Q8N112 SNTB1-202ENST00000517992 2273 ntAPPRIS P1 TSL 1 (best) BASIC25.28■■□□□ 1.64
LSMEM2Q8N112 RCOR3-202ENST00000367006 2525 ntTSL 1 (best) BASIC25.27■■□□□ 1.64
LSMEM2Q8N112 HES6-205ENST00000409356 528 ntTSL 2 BASIC25.27■■□□□ 1.64
LSMEM2Q8N112 TMEM200C-201ENST00000383490 1920 ntAPPRIS P1 BASIC25.26■■□□□ 1.63
LSMEM2Q8N112 DTNBP1-212ENST00000622898 1305 ntTSL 1 (best) BASIC25.26■■□□□ 1.63
LSMEM2Q8N112 MPP6-203ENST00000409761 1703 ntTSL 5 BASIC25.26■■□□□ 1.63
LSMEM2Q8N112 DNPEP-201ENST00000273075 2425 ntAPPRIS P3 TSL 1 (best) BASIC25.25■■□□□ 1.63
LSMEM2Q8N112 BATF3-201ENST00000243440 980 ntAPPRIS P1 TSL 1 (best) BASIC25.25■■□□□ 1.63
LSMEM2Q8N112 NME2-205ENST00000512737 826 ntAPPRIS P1 TSL 1 (best) BASIC25.25■■□□□ 1.63
LSMEM2Q8N112 C11orf95-204ENST00000546282 390 ntTSL 3 BASIC25.25■■□□□ 1.63
LSMEM2Q8N112 FHL2-202ENST00000344213 1769 ntTSL 1 (best) BASIC25.25■■□□□ 1.63
LSMEM2Q8N112 MRAP2-201ENST00000257776 2153 ntAPPRIS P1 TSL 1 (best) BASIC25.25■■□□□ 1.63
LSMEM2Q8N112 HNRNPAB-204ENST00000504898 1785 ntAPPRIS P4 TSL 1 (best) BASIC25.24■■□□□ 1.63
LSMEM2Q8N112 CCDC160-202ENST00000517294 1790 ntAPPRIS P1 TSL 5 BASIC25.24■■□□□ 1.63
LSMEM2Q8N112 AP004833.2-201ENST00000532228 1454 ntBASIC25.24■■□□□ 1.63
LSMEM2Q8N112 EI24-212ENST00000615917 1407 ntTSL 2 BASIC25.24■■□□□ 1.63
LSMEM2Q8N112 ZNF276-202ENST00000443381 2267 ntAPPRIS P1 TSL 1 (best) BASIC25.24■■□□□ 1.63
LSMEM2Q8N112 KCNJ4-201ENST00000303592 2065 ntAPPRIS P1 TSL 1 (best) BASIC25.24■■□□□ 1.63
LSMEM2Q8N112 PHF20L1-207ENST00000395379 1998 ntTSL 5 BASIC25.24■■□□□ 1.63
LSMEM2Q8N112 C17orf97-201ENST00000360127 1839 ntAPPRIS P2 TSL 1 (best) BASIC25.23■■□□□ 1.63
LSMEM2Q8N112 BMP8A-201ENST00000331593 1692 ntAPPRIS P1 TSL 1 (best) BASIC25.23■■□□□ 1.63
LSMEM2Q8N112 PIGX-201ENST00000296333 953 ntAPPRIS ALT2 TSL 2 BASIC25.23■■□□□ 1.63
LSMEM2Q8N112 H2AFV-204ENST00000350771 687 ntTSL 2 BASIC25.23■■□□□ 1.63
LSMEM2Q8N112 HOMER2-202ENST00000450735 1950 ntAPPRIS ALT2 TSL 1 (best) BASIC25.23■■□□□ 1.63
LSMEM2Q8N112 EVC-203ENST00000509451 1960 ntTSL 1 (best) BASIC25.23■■□□□ 1.63
LSMEM2Q8N112 MORF4L1-203ENST00000426013 1880 ntAPPRIS P1 TSL 1 (best) BASIC25.23■■□□□ 1.63
LSMEM2Q8N112 NAPA-201ENST00000263354 1839 ntAPPRIS P1 TSL 1 (best) BASIC25.23■■□□□ 1.63
LSMEM2Q8N112 NOXA1-201ENST00000341349 1678 ntAPPRIS P1 TSL 1 (best) BASIC25.23■■□□□ 1.63
LSMEM2Q8N112 PEA15-201ENST00000360472 2471 ntAPPRIS P1 TSL 1 (best) BASIC25.22■■□□□ 1.63
LSMEM2Q8N112 CAAP1-205ENST00000520187 773 ntTSL 5 BASIC25.22■■□□□ 1.63
LSMEM2Q8N112 CRNDE-206ENST00000559432 587 ntTSL 3 BASIC25.22■■□□□ 1.63
LSMEM2Q8N112 MXRA7-203ENST00000449428 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC25.21■■□□□ 1.63
LSMEM2Q8N112 PRELID2-207ENST00000511435 1894 ntAPPRIS ALT1 TSL 2 BASIC25.21■■□□□ 1.63
LSMEM2Q8N112 PCK2-202ENST00000396973 1830 ntTSL 1 (best) BASIC25.21■■□□□ 1.63
LSMEM2Q8N112 PSMG1-201ENST00000331573 2154 ntAPPRIS P1 TSL 1 (best) BASIC25.21■■□□□ 1.63
LSMEM2Q8N112 AHSA2-201ENST00000357022 2437 ntTSL 1 (best) BASIC25.2■■□□□ 1.62
LSMEM2Q8N112 SLC16A11-201ENST00000308009 1803 ntAPPRIS P2 TSL 1 (best) BASIC25.2■■□□□ 1.62
LSMEM2Q8N112 ZNF768-201ENST00000380412 2315 ntAPPRIS P2 TSL 1 (best) BASIC25.2■■□□□ 1.62
LSMEM2Q8N112 C11orf80-218ENST00000540737 1786 ntAPPRIS ALT2 TSL 2 BASIC25.2■■□□□ 1.62
LSMEM2Q8N112 DERA-201ENST00000428559 1705 ntAPPRIS P1 TSL 1 (best) BASIC25.2■■□□□ 1.62
LSMEM2Q8N112 ATP6V1E2-204ENST00000522587 1559 ntAPPRIS P1 TSL 3 BASIC25.19■■□□□ 1.62
Retrieved 100 of 98,524 protein–RNA pairs in 27.6 ms