Protein–RNA interactions for Protein: Q8IZH2

XRN1, 5'-3' exoribonuclease 1, humanhuman

Known RBP Predictions only

Length 1,706 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
XRN1Q8IZH2 C20orf24-201ENST00000342422 896 ntTSL 2 BASIC36.25■■■■□ 3.39
XRN1Q8IZH2 C20orf24-202ENST00000344795 1114 ntAPPRIS P1 TSL 1 (best) BASIC36.25■■■■□ 3.39
XRN1Q8IZH2 PSMG4-207ENST00000451246 824 ntTSL 3 BASIC36.25■■■■□ 3.39
XRN1Q8IZH2 LOR-201ENST00000368742 1230 ntAPPRIS P1 TSL 1 (best) BASIC36.25■■■■□ 3.39
XRN1Q8IZH2 ATP5G2P3-201ENST00000429083 425 ntBASIC36.25■■■■□ 3.39
XRN1Q8IZH2 KMT2E-AS1-201ENST00000453677 736 ntTSL 3 BASIC36.25■■■■□ 3.39
XRN1Q8IZH2 DSG2-202ENST00000585206 1081 ntTSL 2 BASIC36.25■■■■□ 3.39
XRN1Q8IZH2 SEC11C-204ENST00000587834 1202 ntAPPRIS P1 TSL 1 (best) BASIC36.25■■■■□ 3.39
XRN1Q8IZH2 GNG10-201ENST00000374293 1491 ntAPPRIS P1 TSL 1 (best) BASIC36.25■■■■□ 3.39
XRN1Q8IZH2 SLC9A3-AS1-207ENST00000607286 1357 ntTSL 5 BASIC36.24■■■■□ 3.39
XRN1Q8IZH2 GAL3ST3-203ENST00000527878 1599 ntAPPRIS P1 TSL 1 (best) BASIC36.24■■■■□ 3.39
XRN1Q8IZH2 DCDC2C-201ENST00000399143 1476 ntAPPRIS P1 TSL 5 BASIC36.24■■■■□ 3.39
XRN1Q8IZH2 NKX2-1-204ENST00000522719 1417 ntAPPRIS P1 TSL 1 (best) BASIC36.23■■■■□ 3.39
XRN1Q8IZH2 PPP1R14A-201ENST00000301242 777 ntAPPRIS P1 TSL 1 (best) BASIC36.23■■■■□ 3.39
XRN1Q8IZH2 MOB2-207ENST00000614710 705 ntTSL 5 BASIC36.22■■■■□ 3.39
XRN1Q8IZH2 EPB41L4A-AS2-201ENST00000623705 1396 ntBASIC36.22■■■■□ 3.39
XRN1Q8IZH2 CSPG5-205ENST00000610462 2073 ntTSL 5 BASIC36.22■■■■□ 3.39
XRN1Q8IZH2 SPATA33-209ENST00000579310 1490 ntAPPRIS ALT2 TSL 2 BASIC36.21■■■■□ 3.39
XRN1Q8IZH2 ATRNL1-209ENST00000609571 1818 ntTSL 1 (best) BASIC36.21■■■■□ 3.39
XRN1Q8IZH2 C14orf80-203ENST00000354560 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC36.21■■■■□ 3.39
XRN1Q8IZH2 GUK1-208ENST00000366728 842 ntTSL 2 BASIC36.2■■■■□ 3.39
XRN1Q8IZH2 AC148477.1-201ENST00000537720 476 ntTSL 3 BASIC36.2■■■■□ 3.39
XRN1Q8IZH2 HNRNPAB-205ENST00000506259 1674 ntAPPRIS ALT2 TSL 1 (best) BASIC36.2■■■■□ 3.39
XRN1Q8IZH2 CMPK2-203ENST00000458098 1224 ntTSL 1 (best) BASIC36.2■■■■□ 3.38
XRN1Q8IZH2 MED25-210ENST00000612854 801 ntTSL 5 BASIC36.2■■■■□ 3.38
XRN1Q8IZH2 MED25-213ENST00000620467 1293 ntTSL 1 (best) BASIC36.2■■■■□ 3.38
XRN1Q8IZH2 MED25-214ENST00000622402 642 ntTSL 5 BASIC36.2■■■■□ 3.38
XRN1Q8IZH2 ILDR2-208ENST00000529387 1238 ntTSL 5 BASIC36.19■■■■□ 3.38
XRN1Q8IZH2 COPRS-201ENST00000302362 968 ntAPPRIS P1 TSL 1 (best) BASIC36.18■■■■□ 3.38
XRN1Q8IZH2 NPC2-207ENST00000555619 1035 ntAPPRIS P2 TSL 1 (best) BASIC36.18■■■■□ 3.38
XRN1Q8IZH2 ELK4-201ENST00000289703 2118 ntTSL 1 (best) BASIC36.17■■■■□ 3.38
XRN1Q8IZH2 KCTD15-206ENST00000588881 1211 ntAPPRIS P1 TSL 2 BASIC36.17■■■■□ 3.38
XRN1Q8IZH2 KHDRBS3-201ENST00000355849 1977 ntAPPRIS P1 TSL 1 (best) BASIC36.16■■■■□ 3.38
XRN1Q8IZH2 UBAC1-201ENST00000371756 1867 ntAPPRIS P1 TSL 1 (best) BASIC36.16■■■■□ 3.38
XRN1Q8IZH2 ZNF470-206ENST00000601902 1640 ntTSL 1 (best) BASIC36.15■■■■□ 3.38
XRN1Q8IZH2 RASL10A-202ENST00000401450 1720 ntTSL 2 BASIC36.14■■■■□ 3.38
XRN1Q8IZH2 LYPD6B-204ENST00000409876 1248 ntAPPRIS ALT2 TSL 1 (best) BASIC36.14■■■■□ 3.38
XRN1Q8IZH2 ECEL1P2-201ENST00000461596 1295 ntBASIC36.14■■■■□ 3.38
XRN1Q8IZH2 GPR137-202ENST00000377702 1478 ntTSL 1 (best) BASIC36.13■■■■□ 3.37
XRN1Q8IZH2 FSD1L-208ENST00000495708 1906 ntTSL 1 (best) BASIC36.13■■■■□ 3.37
XRN1Q8IZH2 HAUS7-201ENST00000370210 1593 ntAPPRIS ALT2 TSL 2 BASIC36.12■■■■□ 3.37
XRN1Q8IZH2 MKNK2-202ENST00000309340 1744 ntAPPRIS ALT2 TSL 1 (best) BASIC36.12■■■■□ 3.37
XRN1Q8IZH2 OPRD1-202ENST00000621425 1217 ntTSL 1 (best) BASIC36.11■■■■□ 3.37
XRN1Q8IZH2 PANK2-207ENST00000610179 1807 ntAPPRIS ALT2 TSL 1 (best) BASIC36.11■■■■□ 3.37
XRN1Q8IZH2 IZUMO4-202ENST00000395301 1021 ntAPPRIS ALT2 TSL 1 (best) BASIC36.1■■■■□ 3.37
XRN1Q8IZH2 TXNL4A-208ENST00000588162 752 ntTSL 2 BASIC36.08■■■■□ 3.37
XRN1Q8IZH2 C19orf12-207ENST00000592153 1504 ntTSL 1 (best) BASIC36.08■■■■□ 3.37
XRN1Q8IZH2 RAB26-201ENST00000210187 1675 ntAPPRIS P1 TSL 1 (best) BASIC36.08■■■■□ 3.37
XRN1Q8IZH2 PDXP-201ENST00000215904 2010 ntAPPRIS P1 TSL 1 (best) BASIC36.08■■■■□ 3.37
XRN1Q8IZH2 AC138207.2-201ENST00000583377 492 ntTSL 2 BASIC36.08■■■■□ 3.37
XRN1Q8IZH2 KLF16-204ENST00000617223 1133 ntAPPRIS P1 TSL 1 (best) BASIC36.08■■■■□ 3.37
XRN1Q8IZH2 CRELD2-203ENST00000404488 1577 ntAPPRIS ALT2 TSL 1 (best) BASIC36.06■■■■□ 3.36
XRN1Q8IZH2 AL121899.1-202ENST00000411839 536 ntTSL 5 BASIC36.06■■■■□ 3.36
XRN1Q8IZH2 UBE2I-213ENST00000566587 1098 ntAPPRIS P1 TSL 2 BASIC36.06■■■■□ 3.36
XRN1Q8IZH2 FTCD-203ENST00000397746 1878 ntAPPRIS P1 TSL 1 (best) BASIC36.05■■■■□ 3.36
XRN1Q8IZH2 AC007029.1-201ENST00000604183 313 ntBASIC36.04■■■■□ 3.36
XRN1Q8IZH2 SSBP3-202ENST00000357475 1533 ntTSL 1 (best) BASIC36.03■■■■□ 3.36
XRN1Q8IZH2 PYY2-202ENST00000441253 1076 ntTSL 1 (best) BASIC36.03■■■■□ 3.36
XRN1Q8IZH2 MIR1-1HG-202ENST00000624914 1220 ntTSL 1 (best) BASIC36.03■■■■□ 3.36
XRN1Q8IZH2 SERP2-201ENST00000379179 784 ntAPPRIS P1 TSL 1 (best) BASIC36.02■■■■□ 3.36
XRN1Q8IZH2 MAZ-205ENST00000562337 1574 ntTSL 3 BASIC36.01■■■■□ 3.36
XRN1Q8IZH2 CCDC160-202ENST00000517294 1790 ntAPPRIS P1 TSL 5 BASIC36.01■■■■□ 3.36
XRN1Q8IZH2 AC129492.7-201ENST00000622992 756 ntBASIC36.01■■■■□ 3.36
XRN1Q8IZH2 ZDHHC3-203ENST00000342790 1336 ntTSL 5 BASIC36.01■■■■□ 3.36
XRN1Q8IZH2 MKRN1-202ENST00000443720 1601 ntAPPRIS ALT2 TSL 1 (best) BASIC36.01■■■■□ 3.35
XRN1Q8IZH2 PGM5-201ENST00000396392 1782 ntTSL 1 (best) BASIC36■■■■□ 3.35
XRN1Q8IZH2 AL135925.1-201ENST00000605920 1701 ntBASIC36■■■■□ 3.35
XRN1Q8IZH2 IFI30-201ENST00000407280 1134 ntAPPRIS P1 TSL 1 (best) BASIC35.99■■■■□ 3.35
XRN1Q8IZH2 AL451085.2-201ENST00000605085 799 ntBASIC35.99■■■■□ 3.35
XRN1Q8IZH2 EID2-201ENST00000390658 1629 ntAPPRIS P1 BASIC35.98■■■■□ 3.35
XRN1Q8IZH2 INPP4A-203ENST00000409463 1565 ntTSL 1 (best) BASIC35.98■■■■□ 3.35
XRN1Q8IZH2 TNFRSF12A-201ENST00000326577 1033 ntAPPRIS P1 TSL 1 (best) BASIC35.98■■■■□ 3.35
XRN1Q8IZH2 PROSER2-202ENST00000379200 1232 ntAPPRIS ALT2 BASIC35.96■■■■□ 3.35
XRN1Q8IZH2 FLVCR1-AS1-203ENST00000426161 892 ntTSL 1 (best) BASIC35.96■■■■□ 3.35
XRN1Q8IZH2 AC064853.2-201ENST00000641246 144 ntAPPRIS P1 BASIC35.95■■■■□ 3.35
XRN1Q8IZH2 MEST-211ENST00000437945 1455 ntTSL 5 BASIC35.95■■■■□ 3.34
XRN1Q8IZH2 AL592293.1-201ENST00000502889 1188 ntBASIC35.94■■■■□ 3.34
XRN1Q8IZH2 GRASP-201ENST00000293662 1933 ntAPPRIS P1 TSL 1 (best) BASIC35.94■■■■□ 3.34
XRN1Q8IZH2 FAM78B-201ENST00000338353 1597 ntAPPRIS P1 TSL 1 (best) BASIC35.94■■■■□ 3.34
XRN1Q8IZH2 AC009831.1-201ENST00000580420 1582 ntBASIC35.92■■■■□ 3.34
XRN1Q8IZH2 OXLD1-201ENST00000374741 620 ntAPPRIS P1 TSL 1 (best) BASIC35.92■■■■□ 3.34
XRN1Q8IZH2 AC126177.7-201ENST00000547904 679 ntBASIC35.92■■■■□ 3.34
XRN1Q8IZH2 SSTR5-201ENST00000293897 1362 ntAPPRIS P1 BASIC35.92■■■■□ 3.34
XRN1Q8IZH2 CHPT1-205ENST00000549872 2001 ntAPPRIS ALT2 TSL 5 BASIC35.92■■■■□ 3.34
XRN1Q8IZH2 MORF4L1-203ENST00000426013 1880 ntAPPRIS P1 TSL 1 (best) BASIC35.91■■■■□ 3.34
XRN1Q8IZH2 ATP11B-209ENST00000493826 963 ntTSL 1 (best) BASIC35.91■■■■□ 3.34
XRN1Q8IZH2 PTPA-210ENST00000414510 1153 ntTSL 1 (best) BASIC35.9■■■■□ 3.34
XRN1Q8IZH2 ARL6IP4-208ENST00000439686 796 ntAPPRIS ALT2 TSL 3 BASIC35.9■■■■□ 3.34
XRN1Q8IZH2 FAM222B-205ENST00000577682 549 ntTSL 4 BASIC35.9■■■■□ 3.34
XRN1Q8IZH2 FEZ1-201ENST00000278919 1748 ntAPPRIS P1 TSL 1 (best) BASIC35.9■■■■□ 3.34
XRN1Q8IZH2 MAPK9-202ENST00000347470 1509 ntTSL 5 BASIC35.9■■■■□ 3.34
XRN1Q8IZH2 CLEC11A-201ENST00000250340 1419 ntAPPRIS P1 TSL 1 (best) BASIC35.9■■■■□ 3.34
XRN1Q8IZH2 HES4-204ENST00000484667 667 ntTSL 3 BASIC35.88■■■■□ 3.34
XRN1Q8IZH2 SLC16A11-201ENST00000308009 1803 ntAPPRIS P2 TSL 1 (best) BASIC35.88■■■■□ 3.33
XRN1Q8IZH2 ERFE-207ENST00000546354 1065 ntAPPRIS P2 TSL 1 (best) BASIC35.88■■■■□ 3.33
XRN1Q8IZH2 C16orf52-207ENST00000569656 1257 ntTSL 5 BASIC35.88■■■■□ 3.33
XRN1Q8IZH2 WDR86-204ENST00000477459 1428 ntTSL 2 BASIC35.88■■■■□ 3.33
XRN1Q8IZH2 ITPKA-201ENST00000260386 1824 ntAPPRIS P1 TSL 1 (best) BASIC35.87■■■■□ 3.33
XRN1Q8IZH2 PSMG3-202ENST00000288607 1391 ntAPPRIS P1 TSL 1 (best) BASIC35.87■■■■□ 3.33
XRN1Q8IZH2 WBP1-201ENST00000233615 1294 ntAPPRIS P2 TSL 1 (best) BASIC35.87■■■■□ 3.33
Retrieved 100 of 98,524 protein–RNA pairs in 46.1 ms