Protein–RNA interactions for Protein: Q6TDU7

CASC1, Protein CASC1, humanhuman

Predictions only

Length 716 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CASC1Q6TDU7 GSR-206ENST00000546342 1482 ntAPPRIS ALT2 TSL 1 (best) BASIC30.95■■■□□ 2.54
CASC1Q6TDU7 VIPR2-203ENST00000402066 1926 ntAPPRIS ALT2 TSL 5 BASIC30.94■■■□□ 2.54
CASC1Q6TDU7 ROM1-201ENST00000278833 1878 ntAPPRIS P2 TSL 1 (best) BASIC30.94■■■□□ 2.54
CASC1Q6TDU7 SHF-208ENST00000560734 1731 ntTSL 3 BASIC30.94■■■□□ 2.54
CASC1Q6TDU7 CARM1-202ENST00000344150 2722 ntAPPRIS ALT2 TSL 5 BASIC30.94■■■□□ 2.54
CASC1Q6TDU7 AC027237.3-202ENST00000558617 1778 ntTSL 2 BASIC30.93■■■□□ 2.54
CASC1Q6TDU7 CADPS-215ENST00000490353 2669 ntTSL 5 BASIC30.93■■■□□ 2.54
CASC1Q6TDU7 PSMG1-201ENST00000331573 2154 ntAPPRIS P1 TSL 1 (best) BASIC30.92■■■□□ 2.54
CASC1Q6TDU7 C11orf80-204ENST00000525908 2135 ntAPPRIS P3 TSL 2 BASIC30.91■■■□□ 2.54
CASC1Q6TDU7 ANKRD65-205ENST00000537107 2190 ntAPPRIS P1 TSL 5 BASIC30.91■■■□□ 2.54
CASC1Q6TDU7 DOCK5-202ENST00000410074 786 ntTSL 2 BASIC30.91■■■□□ 2.54
CASC1Q6TDU7 SV2B-203ENST00000545111 2099 ntTSL 2 BASIC30.91■■■□□ 2.54
CASC1Q6TDU7 ZNF219-201ENST00000360947 3071 ntAPPRIS P1 TSL 1 (best) BASIC30.91■■■□□ 2.54
CASC1Q6TDU7 LINC00273-201ENST00000539813 1452 ntBASIC30.9■■■□□ 2.54
CASC1Q6TDU7 NAPA-201ENST00000263354 1839 ntAPPRIS P1 TSL 1 (best) BASIC30.9■■■□□ 2.54
CASC1Q6TDU7 WTAP-206ENST00000621533 2109 ntAPPRIS P1 TSL 2 BASIC30.9■■■□□ 2.54
CASC1Q6TDU7 HDGFL1-201ENST00000510882 2174 ntAPPRIS P1 BASIC30.9■■■□□ 2.54
CASC1Q6TDU7 PCYT2-203ENST00000538936 5147 ntTSL 1 (best) BASIC30.9■■■□□ 2.54
CASC1Q6TDU7 AC087741.3-201ENST00000624270 1347 ntBASIC30.9■■■□□ 2.54
CASC1Q6TDU7 PURG-201ENST00000339382 2693 ntTSL 1 (best) BASIC30.9■■■□□ 2.54
CASC1Q6TDU7 WHAMMP2-203ENST00000563942 1603 ntBASIC30.89■■■□□ 2.54
CASC1Q6TDU7 UBE2A-207ENST00000628549 934 ntTSL 2 BASIC30.89■■■□□ 2.54
CASC1Q6TDU7 CFAP73-201ENST00000335621 1514 ntAPPRIS P1 TSL 5 BASIC30.88■■■□□ 2.53
CASC1Q6TDU7 MAPK8IP1P1-201ENST00000574657 1439 ntBASIC30.87■■■□□ 2.53
CASC1Q6TDU7 MACROD1-201ENST00000255681 1205 ntAPPRIS P1 TSL 1 (best) BASIC30.86■■■□□ 2.53
CASC1Q6TDU7 HTR6-201ENST00000289753 1984 ntAPPRIS P1 TSL 1 (best) BASIC30.85■■■□□ 2.53
CASC1Q6TDU7 MARCKSL1-201ENST00000329421 1699 ntAPPRIS P1 TSL 1 (best) BASIC30.85■■■□□ 2.53
CASC1Q6TDU7 CDKN2A-201ENST00000304494 1218 ntTSL 1 (best) BASIC30.85■■■□□ 2.53
CASC1Q6TDU7 SNTB1-202ENST00000517992 2273 ntAPPRIS P1 TSL 1 (best) BASIC30.84■■■□□ 2.53
CASC1Q6TDU7 FADD-201ENST00000301838 1841 ntAPPRIS P1 TSL 1 (best) BASIC30.83■■■□□ 2.53
CASC1Q6TDU7 CIB2-204ENST00000557846 934 ntTSL 3 BASIC30.83■■■□□ 2.53
CASC1Q6TDU7 COX4I1-203ENST00000562336 873 ntAPPRIS P1 TSL 5 BASIC30.83■■■□□ 2.53
CASC1Q6TDU7 KCNJ4-201ENST00000303592 2065 ntAPPRIS P1 TSL 1 (best) BASIC30.82■■■□□ 2.52
CASC1Q6TDU7 MFSD12-202ENST00000389395 2039 ntAPPRIS ALT2 TSL 1 (best) BASIC30.82■■■□□ 2.52
CASC1Q6TDU7 AP000911.1-206ENST00000531938 711 ntTSL 3 BASIC30.82■■■□□ 2.52
CASC1Q6TDU7 ADAT3-201ENST00000329478 1620 ntAPPRIS P1 TSL 1 (best) BASIC30.82■■■□□ 2.52
CASC1Q6TDU7 RTN2-202ENST00000344680 2063 ntAPPRIS P1 TSL 1 (best) BASIC30.82■■■□□ 2.52
CASC1Q6TDU7 ZNF768-201ENST00000380412 2315 ntAPPRIS P2 TSL 1 (best) BASIC30.81■■■□□ 2.52
CASC1Q6TDU7 VAX2-201ENST00000234392 1147 ntAPPRIS P1 TSL 1 (best) BASIC30.81■■■□□ 2.52
CASC1Q6TDU7 RPS2P35-201ENST00000443417 897 ntBASIC30.81■■■□□ 2.52
CASC1Q6TDU7 ZNF639-209ENST00000496856 2033 ntAPPRIS P1 TSL 1 (best) BASIC30.81■■■□□ 2.52
CASC1Q6TDU7 ACAA1-220ENST00000627515 1862 ntTSL 5 BASIC30.8■■■□□ 2.52
CASC1Q6TDU7 SLC25A6-201ENST00000381401 2062 ntAPPRIS P1 TSL 1 (best) BASIC30.8■■■□□ 2.52
CASC1Q6TDU7 AC044849.2-201ENST00000606596 710 ntBASIC30.8■■■□□ 2.52
CASC1Q6TDU7 NDEL1-202ENST00000380025 2181 ntTSL 5 BASIC30.79■■■□□ 2.52
CASC1Q6TDU7 CHSY1-201ENST00000254190 4550 ntAPPRIS P1 TSL 1 (best) BASIC30.78■■■□□ 2.52
CASC1Q6TDU7 PHF23-205ENST00000571362 1768 ntTSL 2 BASIC30.78■■■□□ 2.52
CASC1Q6TDU7 DNAJC21-201ENST00000342382 2309 ntAPPRIS P1 TSL 1 (best) BASIC30.78■■■□□ 2.52
CASC1Q6TDU7 NRBF2-202ENST00000435510 1816 ntTSL 2 BASIC30.77■■■□□ 2.52
CASC1Q6TDU7 HECA-201ENST00000367658 5614 ntAPPRIS P1 TSL 1 (best) BASIC30.77■■■□□ 2.52
CASC1Q6TDU7 CPTP-201ENST00000343938 2190 ntAPPRIS P1 TSL 2 BASIC30.77■■■□□ 2.52
CASC1Q6TDU7 CTSA-203ENST00000372459 1972 ntTSL 1 (best) BASIC30.77■■■□□ 2.52
CASC1Q6TDU7 PPP1R35-201ENST00000292330 1031 ntAPPRIS P1 TSL 1 (best) BASIC30.76■■■□□ 2.51
CASC1Q6TDU7 AC004837.3-201ENST00000420748 565 ntTSL 4 BASIC30.76■■■□□ 2.51
CASC1Q6TDU7 SMIM12-205ENST00000456842 918 ntAPPRIS P1 TSL 2 BASIC30.76■■■□□ 2.51
CASC1Q6TDU7 C11orf80-210ENST00000527634 1666 ntAPPRIS ALT2 TSL 5 BASIC30.76■■■□□ 2.51
CASC1Q6TDU7 CAMKK1-201ENST00000158166 2459 ntTSL 1 (best) BASIC30.76■■■□□ 2.51
CASC1Q6TDU7 CD6-206ENST00000452451 1782 ntAPPRIS ALT2 TSL 1 (best) BASIC30.76■■■□□ 2.51
CASC1Q6TDU7 MRAP2-201ENST00000257776 2153 ntAPPRIS P1 TSL 1 (best) BASIC30.75■■■□□ 2.51
CASC1Q6TDU7 RAB3IL1-202ENST00000394836 2284 ntAPPRIS P1 TSL 1 (best) BASIC30.75■■■□□ 2.51
CASC1Q6TDU7 MAZ-208ENST00000563402 1461 ntTSL 5 BASIC30.75■■■□□ 2.51
CASC1Q6TDU7 MAZ-210ENST00000566906 1455 ntTSL 5 BASIC30.75■■■□□ 2.51
CASC1Q6TDU7 SNX15-202ENST00000377244 1939 ntAPPRIS P1 TSL 1 (best) BASIC30.75■■■□□ 2.51
CASC1Q6TDU7 AC018358.1-201ENST00000631079 1402 ntBASIC30.74■■■□□ 2.51
CASC1Q6TDU7 CALM3-209ENST00000597743 577 ntTSL 4 BASIC30.74■■■□□ 2.51
CASC1Q6TDU7 DACT2-202ENST00000366796 2028 ntAPPRIS ALT2 TSL 1 (best) BASIC30.74■■■□□ 2.51
CASC1Q6TDU7 CYB5R3-201ENST00000352397 2124 ntAPPRIS P1 TSL 1 (best) BASIC30.74■■■□□ 2.51
CASC1Q6TDU7 FLJ37453-201ENST00000317122 2473 ntTSL 2 BASIC30.73■■■□□ 2.51
CASC1Q6TDU7 HIST2H3C-201ENST00000369158 1656 ntAPPRIS P1 BASIC30.73■■■□□ 2.51
CASC1Q6TDU7 HIST2H3A-201ENST00000403683 1656 ntAPPRIS P1 BASIC30.73■■■□□ 2.51
CASC1Q6TDU7 RAB40C-204ENST00000538492 2569 ntAPPRIS P1 TSL 2 BASIC30.73■■■□□ 2.51
CASC1Q6TDU7 LINC02323-201ENST00000559946 1603 ntTSL 3 BASIC30.73■■■□□ 2.51
CASC1Q6TDU7 SYT12-205ENST00000527043 1661 ntAPPRIS P1 TSL 1 (best) BASIC30.72■■■□□ 2.51
CASC1Q6TDU7 FRAT2-201ENST00000371019 2213 ntAPPRIS P1 BASIC30.72■■■□□ 2.51
CASC1Q6TDU7 AC009097.4-201ENST00000566738 777 ntTSL 2 BASIC30.72■■■□□ 2.51
CASC1Q6TDU7 RCOR3-202ENST00000367006 2525 ntTSL 1 (best) BASIC30.72■■■□□ 2.51
CASC1Q6TDU7 RP9P-201ENST00000381639 1303 ntTSL 1 (best) BASIC30.72■■■□□ 2.51
CASC1Q6TDU7 RNF19B-201ENST00000235150 2334 ntAPPRIS ALT2 TSL 1 (best) BASIC30.72■■■□□ 2.51
CASC1Q6TDU7 HDGF-201ENST00000357325 2380 ntAPPRIS P1 TSL 1 (best) BASIC30.71■■■□□ 2.51
CASC1Q6TDU7 UCK1-204ENST00000372215 2167 ntAPPRIS P1 TSL 1 (best) BASIC30.71■■■□□ 2.51
CASC1Q6TDU7 SRSF9-201ENST00000229390 1201 ntAPPRIS P1 TSL 1 (best) BASIC30.71■■■□□ 2.51
CASC1Q6TDU7 PARD6A-202ENST00000458121 1260 ntAPPRIS ALT1 TSL 1 (best) BASIC30.71■■■□□ 2.51
CASC1Q6TDU7 ZNF470-206ENST00000601902 1640 ntTSL 1 (best) BASIC30.71■■■□□ 2.51
CASC1Q6TDU7 NR6A1-203ENST00000416460 1898 ntAPPRIS ALT2 TSL 1 (best) BASIC30.71■■■□□ 2.51
CASC1Q6TDU7 TMEM251-202ENST00000415050 1303 ntTSL 2 BASIC30.71■■■□□ 2.51
CASC1Q6TDU7 RUNDC3A-201ENST00000225441 1821 ntTSL 1 (best) BASIC30.7■■■□□ 2.5
CASC1Q6TDU7 CCKBR-201ENST00000334619 2121 ntAPPRIS P1 TSL 1 (best) BASIC30.69■■■□□ 2.5
CASC1Q6TDU7 EPB41L4B-202ENST00000374566 5800 ntAPPRIS P4 TSL 1 (best) BASIC30.69■■■□□ 2.5
CASC1Q6TDU7 TMEM150A-202ENST00000334462 1518 ntAPPRIS P1 TSL 1 (best) BASIC30.68■■■□□ 2.5
CASC1Q6TDU7 PEA15-201ENST00000360472 2471 ntAPPRIS P1 TSL 1 (best) BASIC30.68■■■□□ 2.5
CASC1Q6TDU7 EIF5A-202ENST00000336458 1511 ntAPPRIS P1 TSL 1 (best) BASIC30.68■■■□□ 2.5
CASC1Q6TDU7 AC104109.3-201ENST00000519718 483 ntAPPRIS P1 TSL 5 BASIC30.67■■■□□ 2.5
CASC1Q6TDU7 FEZ1-201ENST00000278919 1748 ntAPPRIS P1 TSL 1 (best) BASIC30.67■■■□□ 2.5
CASC1Q6TDU7 MXRA7-202ENST00000375036 1950 ntAPPRIS ALT2 TSL 2 BASIC30.66■■■□□ 2.5
CASC1Q6TDU7 PIK3R2-207ENST00000617130 2187 ntAPPRIS P1 TSL 1 (best) BASIC30.66■■■□□ 2.5
CASC1Q6TDU7 FAM120AOS-202ENST00000423591 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC30.66■■■□□ 2.5
CASC1Q6TDU7 FBXL8-206ENST00000519917 1460 ntAPPRIS P1 TSL 5 BASIC30.66■■■□□ 2.5
CASC1Q6TDU7 FAM107B-205ENST00000378467 2374 ntAPPRIS P1 TSL 1 (best) BASIC30.66■■■□□ 2.5
CASC1Q6TDU7 CLK2-203ENST00000368361 2166 ntAPPRIS ALT1 TSL 1 (best) BASIC30.66■■■□□ 2.5
CASC1Q6TDU7 OSBP-201ENST00000263847 5083 ntAPPRIS P1 TSL 1 (best) BASIC30.65■■■□□ 2.5
Retrieved 100 of 98,524 protein–RNA pairs in 112.7 ms