Protein–RNA interactions for Protein: Q495X7

TRIM60, Tripartite motif-containing protein 60, humanhuman

Predictions only

Length 471 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM60Q495X7 FCGRT-217ENST00000599988 660 ntTSL 5 BASIC28.45■■■□□ 2.14
TRIM60Q495X7 LSM6-202ENST00000502781 1352 ntAPPRIS P1 TSL 1 (best) BASIC28.45■■■□□ 2.14
TRIM60Q495X7 CISD3-204ENST00000613478 2074 ntAPPRIS P1 TSL 2 BASIC28.44■■■□□ 2.14
TRIM60Q495X7 RPS2-210ENST00000530225 765 ntTSL 2 BASIC28.44■■■□□ 2.14
TRIM60Q495X7 HOMER3-202ENST00000392351 1557 ntAPPRIS P3 TSL 1 (best) BASIC28.44■■■□□ 2.14
TRIM60Q495X7 GRK6-206ENST00000507633 1660 ntTSL 5 BASIC28.43■■■□□ 2.14
TRIM60Q495X7 C20orf24-201ENST00000342422 896 ntTSL 2 BASIC28.43■■■□□ 2.14
TRIM60Q495X7 C20orf24-202ENST00000344795 1114 ntAPPRIS P1 TSL 1 (best) BASIC28.43■■■□□ 2.14
TRIM60Q495X7 C19orf12-207ENST00000592153 1504 ntTSL 1 (best) BASIC28.43■■■□□ 2.14
TRIM60Q495X7 AC107214.1-201ENST00000457303 559 ntTSL 1 (best) BASIC28.42■■■□□ 2.14
TRIM60Q495X7 MAPK8IP1P1-201ENST00000574657 1439 ntBASIC28.42■■■□□ 2.14
TRIM60Q495X7 TNFRSF12A-201ENST00000326577 1033 ntAPPRIS P1 TSL 1 (best) BASIC28.41■■■□□ 2.14
TRIM60Q495X7 IFI30-201ENST00000407280 1134 ntAPPRIS P1 TSL 1 (best) BASIC28.41■■■□□ 2.14
TRIM60Q495X7 ILDR2-208ENST00000529387 1238 ntTSL 5 BASIC28.41■■■□□ 2.14
TRIM60Q495X7 FAM222B-205ENST00000577682 549 ntTSL 4 BASIC28.41■■■□□ 2.14
TRIM60Q495X7 SEC11C-204ENST00000587834 1202 ntAPPRIS P1 TSL 1 (best) BASIC28.41■■■□□ 2.14
TRIM60Q495X7 IZUMO4-202ENST00000395301 1021 ntAPPRIS ALT2 TSL 1 (best) BASIC28.4■■■□□ 2.14
TRIM60Q495X7 HES4-204ENST00000484667 667 ntTSL 3 BASIC28.4■■■□□ 2.14
TRIM60Q495X7 MAPK12-201ENST00000215659 1918 ntAPPRIS P1 TSL 1 (best) BASIC28.39■■■□□ 2.14
TRIM60Q495X7 MAP4K3-211ENST00000484274 407 ntTSL 2 BASIC28.39■■■□□ 2.14
TRIM60Q495X7 LOR-201ENST00000368742 1230 ntAPPRIS P1 TSL 1 (best) BASIC28.38■■■□□ 2.13
TRIM60Q495X7 CMPK2-203ENST00000458098 1224 ntTSL 1 (best) BASIC28.38■■■□□ 2.13
TRIM60Q495X7 SOD3-201ENST00000382120 1526 ntAPPRIS P1 TSL 1 (best) BASIC28.38■■■□□ 2.13
TRIM60Q495X7 PROSER2-202ENST00000379200 1232 ntAPPRIS ALT2 BASIC28.37■■■□□ 2.13
TRIM60Q495X7 DCDC2C-201ENST00000399143 1476 ntAPPRIS P1 TSL 5 BASIC28.36■■■□□ 2.13
TRIM60Q495X7 ARL6IP4-208ENST00000439686 796 ntAPPRIS ALT2 TSL 3 BASIC28.36■■■□□ 2.13
TRIM60Q495X7 G6PC3-201ENST00000269097 1533 ntAPPRIS P1 TSL 1 (best) BASIC28.36■■■□□ 2.13
TRIM60Q495X7 TRIOBP-205ENST00000407319 2125 ntAPPRIS P3 TSL 1 (best) BASIC28.35■■■□□ 2.13
TRIM60Q495X7 C1QTNF8-201ENST00000328449 1627 ntAPPRIS P1 TSL 5 BASIC28.35■■■□□ 2.13
TRIM60Q495X7 ZNF470-206ENST00000601902 1640 ntTSL 1 (best) BASIC28.35■■■□□ 2.13
TRIM60Q495X7 CRELD2-203ENST00000404488 1577 ntAPPRIS ALT2 TSL 1 (best) BASIC28.34■■■□□ 2.13
TRIM60Q495X7 HMX1-201ENST00000400677 1895 ntAPPRIS P1 TSL 1 (best) BASIC28.34■■■□□ 2.13
TRIM60Q495X7 SERP2-201ENST00000379179 784 ntAPPRIS P1 TSL 1 (best) BASIC28.33■■■□□ 2.13
TRIM60Q495X7 LYPD6B-204ENST00000409876 1248 ntAPPRIS ALT2 TSL 1 (best) BASIC28.33■■■□□ 2.13
TRIM60Q495X7 PEX7-203ENST00000541292 945 ntTSL 5 BASIC28.33■■■□□ 2.13
TRIM60Q495X7 MOB2-207ENST00000614710 705 ntTSL 5 BASIC28.33■■■□□ 2.13
TRIM60Q495X7 ATXN3-252ENST00000620536 1044 ntTSL 5 BASIC28.33■■■□□ 2.13
TRIM60Q495X7 ATXN3-253ENST00000621269 936 ntTSL 5 BASIC28.33■■■□□ 2.13
TRIM60Q495X7 KHDRBS3-201ENST00000355849 1977 ntAPPRIS P1 TSL 1 (best) BASIC28.33■■■□□ 2.13
TRIM60Q495X7 KRTAP5-5-201ENST00000399676 933 ntAPPRIS P1 BASIC28.32■■■□□ 2.12
TRIM60Q495X7 DUX4L18-201ENST00000553347 1267 ntBASIC28.32■■■□□ 2.12
TRIM60Q495X7 AC129492.7-201ENST00000622992 756 ntBASIC28.32■■■□□ 2.12
TRIM60Q495X7 SSTR5-201ENST00000293897 1362 ntAPPRIS P1 BASIC28.32■■■□□ 2.12
TRIM60Q495X7 ELK4-201ENST00000289703 2118 ntTSL 1 (best) BASIC28.31■■■□□ 2.12
TRIM60Q495X7 COPRS-201ENST00000302362 968 ntAPPRIS P1 TSL 1 (best) BASIC28.31■■■□□ 2.12
TRIM60Q495X7 MED25-210ENST00000612854 801 ntTSL 5 BASIC28.31■■■□□ 2.12
TRIM60Q495X7 MED25-213ENST00000620467 1293 ntTSL 1 (best) BASIC28.31■■■□□ 2.12
TRIM60Q495X7 MED25-214ENST00000622402 642 ntTSL 5 BASIC28.31■■■□□ 2.12
TRIM60Q495X7 OVOL2-201ENST00000278780 1555 ntAPPRIS P1 TSL 1 (best) BASIC28.3■■■□□ 2.12
TRIM60Q495X7 TAZ-201ENST00000369776 1596 ntTSL 1 (best) BASIC28.3■■■□□ 2.12
TRIM60Q495X7 AC126177.7-201ENST00000547904 679 ntBASIC28.3■■■□□ 2.12
TRIM60Q495X7 TXNL4A-208ENST00000588162 752 ntTSL 2 BASIC28.3■■■□□ 2.12
TRIM60Q495X7 MIR1-1HG-202ENST00000624914 1220 ntTSL 1 (best) BASIC28.3■■■□□ 2.12
TRIM60Q495X7 AL035685.1-201ENST00000636663 812 ntBASIC28.3■■■□□ 2.12
TRIM60Q495X7 ZDHHC3-203ENST00000342790 1336 ntTSL 5 BASIC28.29■■■□□ 2.12
TRIM60Q495X7 C11orf63-202ENST00000307257 1964 ntTSL 2 BASIC28.29■■■□□ 2.12
TRIM60Q495X7 MAPK9-202ENST00000347470 1509 ntTSL 5 BASIC28.28■■■□□ 2.12
TRIM60Q495X7 UBAC1-201ENST00000371756 1867 ntAPPRIS P1 TSL 1 (best) BASIC28.28■■■□□ 2.12
TRIM60Q495X7 AL157400.5-201ENST00000507624 621 ntBASIC28.28■■■□□ 2.12
TRIM60Q495X7 AC148477.1-201ENST00000537720 476 ntTSL 3 BASIC28.28■■■□□ 2.12
TRIM60Q495X7 UBE2I-213ENST00000566587 1098 ntAPPRIS P1 TSL 2 BASIC28.28■■■□□ 2.12
TRIM60Q495X7 NKX2-1-204ENST00000522719 1417 ntAPPRIS P1 TSL 1 (best) BASIC28.27■■■□□ 2.12
TRIM60Q495X7 AL121899.1-202ENST00000411839 536 ntTSL 5 BASIC28.27■■■□□ 2.12
TRIM60Q495X7 SPATA33-209ENST00000579310 1490 ntAPPRIS ALT2 TSL 2 BASIC28.27■■■□□ 2.12
TRIM60Q495X7 MBOAT7-203ENST00000391754 1797 ntTSL 1 (best) BASIC28.27■■■□□ 2.12
TRIM60Q495X7 WDR86-204ENST00000477459 1428 ntTSL 2 BASIC28.26■■■□□ 2.12
TRIM60Q495X7 C14orf80-203ENST00000354560 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC28.26■■■□□ 2.11
TRIM60Q495X7 EIF5A-211ENST00000576930 1439 ntAPPRIS P1 TSL 5 BASIC28.26■■■□□ 2.11
TRIM60Q495X7 PYY2-202ENST00000441253 1076 ntTSL 1 (best) BASIC28.25■■■□□ 2.11
TRIM60Q495X7 AL592293.1-201ENST00000502889 1188 ntBASIC28.25■■■□□ 2.11
TRIM60Q495X7 TBX2-AS1-203ENST00000590421 861 ntTSL 2 BASIC28.25■■■□□ 2.11
TRIM60Q495X7 AL451085.2-201ENST00000605085 799 ntBASIC28.25■■■□□ 2.11
TRIM60Q495X7 HNRNPAB-205ENST00000506259 1674 ntAPPRIS ALT2 TSL 1 (best) BASIC28.25■■■□□ 2.11
TRIM60Q495X7 FSD1L-208ENST00000495708 1906 ntTSL 1 (best) BASIC28.24■■■□□ 2.11
TRIM60Q495X7 PGM5-201ENST00000396392 1782 ntTSL 1 (best) BASIC28.24■■■□□ 2.11
TRIM60Q495X7 AC007029.1-201ENST00000604183 313 ntBASIC28.23■■■□□ 2.11
TRIM60Q495X7 FAM78B-201ENST00000338353 1597 ntAPPRIS P1 TSL 1 (best) BASIC28.23■■■□□ 2.11
TRIM60Q495X7 AC009831.1-201ENST00000580420 1582 ntBASIC28.21■■■□□ 2.11
TRIM60Q495X7 FLVCR1-AS1-203ENST00000426161 892 ntTSL 1 (best) BASIC28.21■■■□□ 2.11
TRIM60Q495X7 ATP11B-209ENST00000493826 963 ntTSL 1 (best) BASIC28.21■■■□□ 2.11
TRIM60Q495X7 RAB26-201ENST00000210187 1675 ntAPPRIS P1 TSL 1 (best) BASIC28.21■■■□□ 2.11
TRIM60Q495X7 PSMG3-202ENST00000288607 1391 ntAPPRIS P1 TSL 1 (best) BASIC28.21■■■□□ 2.11
TRIM60Q495X7 RASL10A-202ENST00000401450 1720 ntTSL 2 BASIC28.21■■■□□ 2.11
TRIM60Q495X7 CSPG5-205ENST00000610462 2073 ntTSL 5 BASIC28.2■■■□□ 2.11
TRIM60Q495X7 AC016910.1-201ENST00000422799 1046 ntTSL 1 (best) BASIC28.2■■■□□ 2.1
TRIM60Q495X7 CAPNS1-204ENST00000587718 1558 ntAPPRIS ALT2 TSL 1 (best) BASIC28.2■■■□□ 2.1
TRIM60Q495X7 MAPK3-203ENST00000395199 1074 ntAPPRIS ALT2 TSL 1 (best) BASIC28.19■■■□□ 2.1
TRIM60Q495X7 TRIR-205ENST00000592273 783 ntTSL 3 BASIC28.19■■■□□ 2.1
TRIM60Q495X7 AC133552.2-201ENST00000619106 1032 ntBASIC28.19■■■□□ 2.1
TRIM60Q495X7 MKRN1-202ENST00000443720 1601 ntAPPRIS ALT2 TSL 1 (best) BASIC28.18■■■□□ 2.1
TRIM60Q495X7 LTC4S-205ENST00000486713 496 ntTSL 2 BASIC28.18■■■□□ 2.1
TRIM60Q495X7 CCDC160-202ENST00000517294 1790 ntAPPRIS P1 TSL 5 BASIC28.17■■■□□ 2.1
TRIM60Q495X7 UBE2D2-205ENST00000505548 1113 ntTSL 1 (best) BASIC28.17■■■□□ 2.1
TRIM60Q495X7 RSPO4-202ENST00000400634 722 ntTSL 1 (best) BASIC28.16■■■□□ 2.1
TRIM60Q495X7 C16orf52-207ENST00000569656 1257 ntTSL 5 BASIC28.16■■■□□ 2.1
TRIM60Q495X7 ZNF688-203ENST00000563276 1492 ntTSL 2 BASIC28.15■■■□□ 2.1
TRIM60Q495X7 MORF4L1-203ENST00000426013 1880 ntAPPRIS P1 TSL 1 (best) BASIC28.15■■■□□ 2.1
TRIM60Q495X7 LY6H-201ENST00000342752 951 ntAPPRIS ALT2 TSL 1 (best) BASIC28.15■■■□□ 2.1
TRIM60Q495X7 LY6H-202ENST00000414417 1056 ntAPPRIS ALT2 TSL 1 (best) BASIC28.15■■■□□ 2.1
TRIM60Q495X7 LY6H-203ENST00000430474 925 ntAPPRIS P3 TSL 3 BASIC28.15■■■□□ 2.1
Retrieved 100 of 98,524 protein–RNA pairs in 34.4 ms