Protein–RNA interactions for Protein: Q3C1V8

BSX, Brain-specific homeobox protein homolog, humanhuman

Predictions only

Length 233 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BSXQ3C1V8 LINC01003-201ENST00000564834 1764 ntBASIC20.29■□□□□ 0.84
BSXQ3C1V8 OTUD5-203ENST00000396743 2682 ntAPPRIS ALT1 TSL 1 (best) BASIC20.29■□□□□ 0.84
BSXQ3C1V8 SLC25A6-201ENST00000381401 2062 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
BSXQ3C1V8 AJAP1-201ENST00000378190 2383 ntAPPRIS P1 TSL 5 BASIC20.29■□□□□ 0.84
BSXQ3C1V8 MISP3-201ENST00000269720 1424 ntAPPRIS ALT2 TSL 5 BASIC20.28■□□□□ 0.84
BSXQ3C1V8 HDGFL1-201ENST00000510882 2174 ntAPPRIS P1 BASIC20.28■□□□□ 0.84
BSXQ3C1V8 JAG2-202ENST00000347004 5720 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
BSXQ3C1V8 AP000547.3-202ENST00000592107 1019 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
BSXQ3C1V8 SHD-201ENST00000543264 2577 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
BSXQ3C1V8 PSMG4-205ENST00000419065 629 ntTSL 2 BASIC20.27■□□□□ 0.84
BSXQ3C1V8 TGFBRAP1-202ENST00000393359 5979 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
BSXQ3C1V8 AC100797.4-201ENST00000631653 1827 ntBASIC20.27■□□□□ 0.84
BSXQ3C1V8 CCNYL1-203ENST00000392209 1952 ntTSL 2 BASIC20.26■□□□□ 0.83
BSXQ3C1V8 CCDC61-204ENST00000595358 1817 ntAPPRIS P2 TSL 5 BASIC20.26■□□□□ 0.83
BSXQ3C1V8 BARX1-201ENST00000253968 1533 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
BSXQ3C1V8 CACNG7-203ENST00000391767 2688 ntAPPRIS P1 TSL 5 BASIC20.26■□□□□ 0.83
BSXQ3C1V8 NPAS3-201ENST00000346562 5847 ntAPPRIS P3 TSL 1 (best) BASIC20.25■□□□□ 0.83
BSXQ3C1V8 EID2-201ENST00000390658 1629 ntAPPRIS P1 BASIC20.25■□□□□ 0.83
BSXQ3C1V8 FTCDNL1-201ENST00000416668 944 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
BSXQ3C1V8 NPC2-207ENST00000555619 1035 ntAPPRIS P2 TSL 1 (best) BASIC20.25■□□□□ 0.83
BSXQ3C1V8 AC012629.2-201ENST00000606513 377 ntTSL 5 BASIC20.25■□□□□ 0.83
BSXQ3C1V8 NDEL1-202ENST00000380025 2181 ntTSL 5 BASIC20.25■□□□□ 0.83
BSXQ3C1V8 PTPA-202ENST00000347048 1989 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
BSXQ3C1V8 TMEM64-201ENST00000418210 4663 ntTSL 2 BASIC20.24■□□□□ 0.83
BSXQ3C1V8 ABL2-203ENST00000392043 2140 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
BSXQ3C1V8 MFSD12-202ENST00000389395 2039 ntAPPRIS ALT2 TSL 1 (best) BASIC20.24■□□□□ 0.83
BSXQ3C1V8 RPUSD1-207ENST00000565809 1918 ntTSL 2 BASIC20.24■□□□□ 0.83
BSXQ3C1V8 GSX1-201ENST00000302945 1663 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
BSXQ3C1V8 RAB3IL1-202ENST00000394836 2284 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
BSXQ3C1V8 FANCE-201ENST00000229769 2554 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
BSXQ3C1V8 C14orf80-202ENST00000334656 1358 ntAPPRIS ALT2 TSL 2 BASIC20.23■□□□□ 0.83
BSXQ3C1V8 MIR762-201ENST00000390236 83 ntBASIC20.23■□□□□ 0.83
BSXQ3C1V8 MZT2B-202ENST00000409255 769 ntAPPRIS ALT2 TSL 5 BASIC20.23■□□□□ 0.83
BSXQ3C1V8 SLC9A3R2-201ENST00000424542 2194 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
BSXQ3C1V8 TAZ-213ENST00000601016 1889 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
BSXQ3C1V8 NPAS3-203ENST00000357798 2763 ntAPPRIS ALT2 TSL 1 (best) BASIC20.22■□□□□ 0.83
BSXQ3C1V8 SEC61G-204ENST00000450622 512 ntAPPRIS P1 TSL 2 BASIC20.22■□□□□ 0.83
BSXQ3C1V8 QDPR-201ENST00000281243 1648 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
BSXQ3C1V8 TBCC-201ENST00000372876 1616 ntAPPRIS P1 BASIC20.22■□□□□ 0.83
BSXQ3C1V8 DNAJC21-201ENST00000342382 2309 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
BSXQ3C1V8 ANKRD65-205ENST00000537107 2190 ntAPPRIS P1 TSL 5 BASIC20.22■□□□□ 0.83
BSXQ3C1V8 PKM-204ENST00000449901 2526 ntTSL 2 BASIC20.22■□□□□ 0.83
BSXQ3C1V8 INPP4A-203ENST00000409463 1565 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
BSXQ3C1V8 RAP2A-201ENST00000245304 5487 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
BSXQ3C1V8 RNF19B-201ENST00000235150 2334 ntAPPRIS ALT2 TSL 1 (best) BASIC20.21■□□□□ 0.83
BSXQ3C1V8 OXSR1-203ENST00000446845 1908 ntTSL 5 BASIC20.21■□□□□ 0.83
BSXQ3C1V8 CPTP-201ENST00000343938 2190 ntAPPRIS P1 TSL 2 BASIC20.21■□□□□ 0.83
BSXQ3C1V8 KIAA2013-201ENST00000376572 2815 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
BSXQ3C1V8 LDLRAD4-218ENST00000592991 1640 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
BSXQ3C1V8 AP002414.2-202ENST00000590929 1450 ntBASIC20.2■□□□□ 0.82
BSXQ3C1V8 AC092755.2-201ENST00000560199 402 ntTSL 3 BASIC20.2■□□□□ 0.82
BSXQ3C1V8 CHML-205ENST00000638160 705 ntTSL 3 BASIC20.2■□□□□ 0.82
BSXQ3C1V8 SV2B-203ENST00000545111 2099 ntTSL 2 BASIC20.2■□□□□ 0.82
BSXQ3C1V8 DNAJB2-202ENST00000392086 1946 ntAPPRIS P1 TSL 2 BASIC20.19■□□□□ 0.82
BSXQ3C1V8 C11orf80-210ENST00000527634 1666 ntAPPRIS ALT2 TSL 5 BASIC20.19■□□□□ 0.82
BSXQ3C1V8 ACAA1-220ENST00000627515 1862 ntTSL 5 BASIC20.19■□□□□ 0.82
BSXQ3C1V8 SLC35D2-201ENST00000253270 1613 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
BSXQ3C1V8 GATA3-AS1-201ENST00000355358 2214 ntTSL 2 BASIC20.19■□□□□ 0.82
BSXQ3C1V8 BIN1-210ENST00000393041 2272 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
BSXQ3C1V8 BCL7C-202ENST00000380317 2409 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
BSXQ3C1V8 CIB2-201ENST00000258930 1598 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
BSXQ3C1V8 KLC2-205ENST00000394078 1557 ntTSL 5 BASIC20.18■□□□□ 0.82
BSXQ3C1V8 INAFM1-201ENST00000552360 1255 ntAPPRIS P1 BASIC20.18■□□□□ 0.82
BSXQ3C1V8 UBALD2-203ENST00000589240 660 ntTSL 2 BASIC20.18■□□□□ 0.82
BSXQ3C1V8 DACT2-202ENST00000366796 2028 ntAPPRIS ALT2 TSL 1 (best) BASIC20.17■□□□□ 0.82
BSXQ3C1V8 GFRA4-202ENST00000319242 900 ntAPPRIS P4 TSL 1 (best) BASIC20.17■□□□□ 0.82
BSXQ3C1V8 TXNL4A-210ENST00000591711 669 ntTSL 2 BASIC20.17■□□□□ 0.82
BSXQ3C1V8 NR6A1-203ENST00000416460 1898 ntAPPRIS ALT2 TSL 1 (best) BASIC20.17■□□□□ 0.82
BSXQ3C1V8 MAP3K5-201ENST00000359015 5197 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
BSXQ3C1V8 MKRN1-202ENST00000443720 1601 ntAPPRIS ALT2 TSL 1 (best) BASIC20.16■□□□□ 0.82
BSXQ3C1V8 SPG21-201ENST00000204566 1822 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
BSXQ3C1V8 H2AFV-205ENST00000381124 628 ntTSL 3 BASIC20.16■□□□□ 0.82
BSXQ3C1V8 TSEN34-203ENST00000396388 1349 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
BSXQ3C1V8 CACNA1H-201ENST00000348261 8208 ntAPPRIS P4 TSL 1 (best) BASIC20.16■□□□□ 0.82
BSXQ3C1V8 AC113189.4-201ENST00000575331 5553 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
BSXQ3C1V8 CRIM1-201ENST00000280527 5912 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
BSXQ3C1V8 CTSA-203ENST00000372459 1972 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
BSXQ3C1V8 UCK1-204ENST00000372215 2167 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
BSXQ3C1V8 PIK3R2-207ENST00000617130 2187 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
BSXQ3C1V8 FAM57A-202ENST00000308278 2412 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
BSXQ3C1V8 RPS2-209ENST00000529806 993 ntTSL 3 BASIC20.15■□□□□ 0.82
BSXQ3C1V8 TERF2-207ENST00000567296 1129 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
BSXQ3C1V8 GTF3C4-202ENST00000483873 1417 ntTSL 3 BASIC20.15■□□□□ 0.82
BSXQ3C1V8 MAZ-205ENST00000562337 1574 ntTSL 3 BASIC20.15■□□□□ 0.82
BSXQ3C1V8 RASL10A-202ENST00000401450 1720 ntTSL 2 BASIC20.15■□□□□ 0.82
BSXQ3C1V8 MEST-211ENST00000437945 1455 ntTSL 5 BASIC20.14■□□□□ 0.81
BSXQ3C1V8 POLR1D-201ENST00000302979 1166 ntAPPRIS P2 TSL 1 (best) BASIC20.14■□□□□ 0.81
BSXQ3C1V8 UBE2S-203ENST00000589978 496 ntTSL 5 BASIC20.14■□□□□ 0.81
BSXQ3C1V8 ETS1-201ENST00000319397 2231 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
BSXQ3C1V8 GPR150-201ENST00000380007 2065 ntAPPRIS P1 BASIC20.14■□□□□ 0.81
BSXQ3C1V8 RPUSD1-208ENST00000567114 1835 ntTSL 2 BASIC20.13■□□□□ 0.81
BSXQ3C1V8 MBOAT7-201ENST00000245615 2529 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
BSXQ3C1V8 ARTN-204ENST00000438616 889 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
BSXQ3C1V8 NKPD1-202ENST00000589776 1950 ntAPPRIS P1 BASIC20.13■□□□□ 0.81
BSXQ3C1V8 AL449106.1-201ENST00000608517 1980 ntBASIC20.13■□□□□ 0.81
BSXQ3C1V8 SNTA1-201ENST00000217381 2342 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
BSXQ3C1V8 KHSRP-201ENST00000398148 2993 ntAPPRIS P2 TSL 1 (best) BASIC20.13■□□□□ 0.81
BSXQ3C1V8 CFAP99-207ENST00000635017 2298 ntTSL 5 BASIC20.13■□□□□ 0.81
BSXQ3C1V8 CLK2-203ENST00000368361 2166 ntAPPRIS ALT1 TSL 1 (best) BASIC20.12■□□□□ 0.81
BSXQ3C1V8 TANGO2-214ENST00000447208 2086 ntTSL 3 BASIC20.12■□□□□ 0.81
Retrieved 100 of 98,524 protein–RNA pairs in 81.1 ms