Protein–RNA interactions for Protein: P52954

LBX1, Transcription factor LBX1, humanhuman

Predictions only

Length 281 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LBX1P52954 C9orf50-201ENST00000372478 1620 ntAPPRIS P2 TSL 2 BASIC29.89■■■□□ 2.37
LBX1P52954 LACTBL1-202ENST00000618559 1500 ntAPPRIS ALT2 TSL 5 BASIC29.88■■■□□ 2.37
LBX1P52954 PKIG-206ENST00000372892 1338 ntAPPRIS P1 TSL 2 BASIC29.88■■■□□ 2.37
LBX1P52954 PSMG3-202ENST00000288607 1391 ntAPPRIS P1 TSL 1 (best) BASIC29.88■■■□□ 2.37
LBX1P52954 CENPX-202ENST00000392359 805 ntAPPRIS P1 TSL 2 BASIC29.87■■■□□ 2.37
LBX1P52954 ZEB1-AS1-205ENST00000605946 382 ntTSL 5 BASIC29.87■■■□□ 2.37
LBX1P52954 AC133552.2-201ENST00000619106 1032 ntBASIC29.87■■■□□ 2.37
LBX1P52954 CFAP73-201ENST00000335621 1514 ntAPPRIS P1 TSL 5 BASIC29.86■■■□□ 2.37
LBX1P52954 AC008406.3-201ENST00000620001 1374 ntBASIC29.85■■■□□ 2.37
LBX1P52954 AC009831.1-201ENST00000580420 1582 ntBASIC29.85■■■□□ 2.37
LBX1P52954 TMEM55B-202ENST00000398020 1696 ntAPPRIS ALT1 TSL 1 (best) BASIC29.85■■■□□ 2.37
LBX1P52954 AC116025.2-201ENST00000576632 443 ntTSL 3 BASIC29.84■■■□□ 2.37
LBX1P52954 TCEA1-214ENST00000640382 1234 ntTSL 5 BASIC29.84■■■□□ 2.37
LBX1P52954 PYCR1-203ENST00000402252 1346 ntTSL 2 BASIC29.83■■■□□ 2.37
LBX1P52954 CD63-201ENST00000257857 1070 ntAPPRIS P1 TSL 1 (best) BASIC29.83■■■□□ 2.37
LBX1P52954 IZUMO4-202ENST00000395301 1021 ntAPPRIS ALT2 TSL 1 (best) BASIC29.83■■■□□ 2.37
LBX1P52954 AC079305.3-201ENST00000455416 218 ntTSL 5 BASIC29.83■■■□□ 2.37
LBX1P52954 QDPR-202ENST00000428702 1278 ntTSL 2 BASIC29.82■■■□□ 2.36
LBX1P52954 UBE2D2-205ENST00000505548 1113 ntTSL 1 (best) BASIC29.81■■■□□ 2.36
LBX1P52954 YBX1P4-201ENST00000392794 808 ntBASIC29.8■■■□□ 2.36
LBX1P52954 AC073934.1-201ENST00000490314 495 ntTSL 4 BASIC29.8■■■□□ 2.36
LBX1P52954 AC009511.2-201ENST00000545904 679 ntTSL 2 BASIC29.8■■■□□ 2.36
LBX1P52954 CDC34-201ENST00000215574 1471 ntAPPRIS P1 TSL 1 (best) BASIC29.8■■■□□ 2.36
LBX1P52954 GAL3ST3-203ENST00000527878 1599 ntAPPRIS P1 TSL 1 (best) BASIC29.78■■■□□ 2.36
LBX1P52954 BARX1-201ENST00000253968 1533 ntAPPRIS P1 TSL 1 (best) BASIC29.78■■■□□ 2.36
LBX1P52954 NAXE-203ENST00000368235 1125 ntAPPRIS P1 TSL 1 (best) BASIC29.78■■■□□ 2.36
LBX1P52954 HAUS7-211ENST00000626181 414 ntAPPRIS ALT2 TSL 5 BASIC29.78■■■□□ 2.36
LBX1P52954 SLC2A4RG-201ENST00000266077 1731 ntAPPRIS P1 TSL 1 (best) BASIC29.78■■■□□ 2.36
LBX1P52954 ABHD17B-202ENST00000377041 1312 ntAPPRIS P4 TSL 1 (best) BASIC29.77■■■□□ 2.36
LBX1P52954 AC007029.1-201ENST00000604183 313 ntBASIC29.77■■■□□ 2.36
LBX1P52954 TMEM165-204ENST00000506198 828 ntTSL 2 BASIC29.76■■■□□ 2.35
LBX1P52954 AC103834.1-201ENST00000520383 144 ntBASIC29.76■■■□□ 2.35
LBX1P52954 MOB2-207ENST00000614710 705 ntTSL 5 BASIC29.76■■■□□ 2.35
LBX1P52954 EVA1B-201ENST00000270824 1054 ntAPPRIS P1 TSL 2 BASIC29.75■■■□□ 2.35
LBX1P52954 ADAT3-201ENST00000329478 1620 ntAPPRIS P1 TSL 1 (best) BASIC29.74■■■□□ 2.35
LBX1P52954 ZDHHC3-203ENST00000342790 1336 ntTSL 5 BASIC29.74■■■□□ 2.35
LBX1P52954 ZNF302-211ENST00000509528 577 ntTSL 4 BASIC29.74■■■□□ 2.35
LBX1P52954 AC074183.2-201ENST00000623112 922 ntBASIC29.74■■■□□ 2.35
LBX1P52954 SOD3-201ENST00000382120 1526 ntAPPRIS P1 TSL 1 (best) BASIC29.74■■■□□ 2.35
LBX1P52954 MIR219A2-201ENST00000608502 1504 ntBASIC29.74■■■□□ 2.35
LBX1P52954 TWIST1-201ENST00000242261 1666 ntAPPRIS P1 TSL 1 (best) BASIC29.73■■■□□ 2.35
LBX1P52954 AQP1-203ENST00000409899 1009 ntTSL 1 (best) BASIC29.73■■■□□ 2.35
LBX1P52954 AC104002.3-202ENST00000557170 1100 ntTSL 3 BASIC29.73■■■□□ 2.35
LBX1P52954 LRP11-202ENST00000367368 1042 ntTSL 2 BASIC29.72■■■□□ 2.35
LBX1P52954 FLVCR1-AS1-203ENST00000426161 892 ntTSL 1 (best) BASIC29.72■■■□□ 2.35
LBX1P52954 MAP4K3-211ENST00000484274 407 ntTSL 2 BASIC29.72■■■□□ 2.35
LBX1P52954 MIR1-1HG-202ENST00000624914 1220 ntTSL 1 (best) BASIC29.72■■■□□ 2.35
LBX1P52954 PKNOX2-AS1-201ENST00000532316 586 ntTSL 3 BASIC29.71■■■□□ 2.35
LBX1P52954 BEX3-202ENST00000372634 753 ntTSL 2 BASIC29.7■■■□□ 2.35
LBX1P52954 MIR638-201ENST00000385237 100 ntBASIC29.7■■■□□ 2.35
LBX1P52954 AL355490.1-201ENST00000445808 805 ntTSL 3 BASIC29.7■■■□□ 2.35
LBX1P52954 LRMDA-215ENST00000611255 1040 ntAPPRIS ALT2 TSL 5 BASIC29.7■■■□□ 2.35
LBX1P52954 HNRNPAB-204ENST00000504898 1785 ntAPPRIS P4 TSL 1 (best) BASIC29.69■■■□□ 2.34
LBX1P52954 TSPAN11-203ENST00000545802 1649 ntTSL 1 (best) BASIC29.69■■■□□ 2.34
LBX1P52954 UBALD1-206ENST00000590965 1462 ntTSL 2 BASIC29.68■■■□□ 2.34
LBX1P52954 LSM6-202ENST00000502781 1352 ntAPPRIS P1 TSL 1 (best) BASIC29.68■■■□□ 2.34
LBX1P52954 AC145124.1-201ENST00000528514 1361 ntTSL 2 BASIC29.68■■■□□ 2.34
LBX1P52954 DUX4L9-201ENST00000449051 1259 ntBASIC29.68■■■□□ 2.34
LBX1P52954 GSX2-202ENST00000503800 1181 ntTSL 5 BASIC29.68■■■□□ 2.34
LBX1P52954 C17orf49-201ENST00000439424 850 ntAPPRIS P3 TSL 1 (best) BASIC29.67■■■□□ 2.34
LBX1P52954 RHOBTB3-206ENST00000506817 1432 ntTSL 2 BASIC29.66■■■□□ 2.34
LBX1P52954 PTPA-210ENST00000414510 1153 ntTSL 1 (best) BASIC29.66■■■□□ 2.34
LBX1P52954 WBP1-201ENST00000233615 1294 ntAPPRIS P2 TSL 1 (best) BASIC29.65■■■□□ 2.34
LBX1P52954 PEMT-206ENST00000435340 960 ntTSL 5 BASIC29.65■■■□□ 2.34
LBX1P52954 VIPR2-204ENST00000421760 717 ntTSL 3 BASIC29.64■■■□□ 2.34
LBX1P52954 AL157400.5-201ENST00000507624 621 ntBASIC29.64■■■□□ 2.34
LBX1P52954 NPTXR-202ENST00000640136 1503 ntAPPRIS P2 TSL 1 (best) BASIC29.63■■■□□ 2.33
LBX1P52954 PSMG4-206ENST00000438998 838 ntAPPRIS P1 TSL 2 BASIC29.63■■■□□ 2.33
LBX1P52954 C16orf52-207ENST00000569656 1257 ntTSL 5 BASIC29.63■■■□□ 2.33
LBX1P52954 AC126177.7-201ENST00000547904 679 ntBASIC29.62■■■□□ 2.33
LBX1P52954 VPS37D-201ENST00000324941 1624 ntAPPRIS P1 TSL 1 (best) BASIC29.61■■■□□ 2.33
LBX1P52954 MPC1-201ENST00000341756 976 ntTSL 1 (best) BASIC29.61■■■□□ 2.33
LBX1P52954 MOSPD3-204ENST00000424091 1115 ntTSL 1 (best) BASIC29.61■■■□□ 2.33
LBX1P52954 RPS2-210ENST00000530225 765 ntTSL 2 BASIC29.61■■■□□ 2.33
LBX1P52954 TMEM170A-202ENST00000561878 1072 ntAPPRIS P1 TSL 1 (best) BASIC29.61■■■□□ 2.33
LBX1P52954 AC009163.4-201ENST00000567194 530 ntAPPRIS P1 TSL 2 BASIC29.61■■■□□ 2.33
LBX1P52954 MPC1-206ENST00000621630 977 ntAPPRIS ALT1 TSL 5 BASIC29.61■■■□□ 2.33
LBX1P52954 MPC1-207ENST00000621685 1192 ntTSL 5 BASIC29.61■■■□□ 2.33
LBX1P52954 AC092647.5-201ENST00000426595 1732 ntAPPRIS P1 TSL 5 BASIC29.61■■■□□ 2.33
LBX1P52954 AC110285.7-201ENST00000624417 1536 ntBASIC29.61■■■□□ 2.33
LBX1P52954 FAM78B-201ENST00000338353 1597 ntAPPRIS P1 TSL 1 (best) BASIC29.6■■■□□ 2.33
LBX1P52954 H2AFY-204ENST00000423969 924 ntTSL 2 BASIC29.6■■■□□ 2.33
LBX1P52954 C14orf80-211ENST00000450383 1107 ntAPPRIS ALT2 TSL 5 BASIC29.6■■■□□ 2.33
LBX1P52954 PLA2G10-201ENST00000438167 1000 ntAPPRIS P1 TSL 1 (best) BASIC29.59■■■□□ 2.33
LBX1P52954 LTC4S-205ENST00000486713 496 ntTSL 2 BASIC29.59■■■□□ 2.33
LBX1P52954 AC139795.1-202ENST00000500444 432 ntBASIC29.59■■■□□ 2.33
LBX1P52954 CDKN3-207ENST00000543789 610 ntTSL 5 BASIC29.59■■■□□ 2.33
LBX1P52954 REST-210ENST00000638187 1334 ntTSL 5 BASIC29.59■■■□□ 2.33
LBX1P52954 CLEC11A-201ENST00000250340 1419 ntAPPRIS P1 TSL 1 (best) BASIC29.58■■■□□ 2.33
LBX1P52954 TYMP-201ENST00000252029 1630 ntAPPRIS P3 TSL 1 (best) BASIC29.58■■■□□ 2.33
LBX1P52954 HNRNPAB-206ENST00000506339 1747 ntAPPRIS ALT2 TSL 5 BASIC29.57■■■□□ 2.32
LBX1P52954 EPM2A-202ENST00000435470 1278 ntTSL 1 (best) BASIC29.57■■■□□ 2.32
LBX1P52954 PRTG-204ENST00000561292 833 ntTSL 3 BASIC29.57■■■□□ 2.32
LBX1P52954 PVT1_1.1-201ENST00000615125 194 ntBASIC29.57■■■□□ 2.32
LBX1P52954 HOXB3-207ENST00000472863 1909 ntTSL 2 BASIC29.57■■■□□ 2.32
LBX1P52954 KISS1-201ENST00000367194 709 ntAPPRIS P2 TSL 1 (best) BASIC29.56■■■□□ 2.32
LBX1P52954 TRAPPC5-202ENST00000426877 765 ntAPPRIS P1 TSL 2 BASIC29.56■■■□□ 2.32
LBX1P52954 GLRB-203ENST00000509282 1757 ntAPPRIS P1 TSL 1 (best) BASIC29.56■■■□□ 2.32
LBX1P52954 ZFAND2B-201ENST00000289528 1314 ntAPPRIS P1 TSL 1 (best) BASIC29.55■■■□□ 2.32
LBX1P52954 NTHL1-201ENST00000219066 1067 ntAPPRIS P1 TSL 1 (best) BASIC29.55■■■□□ 2.32
Retrieved 100 of 98,524 protein–RNA pairs in 7.8 ms