Protein–RNA interactions for Protein: P48065

SLC6A12, Sodium- and chloride-dependent betaine transporter, humanhuman

Predictions only

Length 614 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC6A12P48065 PLEKHF1-201ENST00000436066 2084 ntAPPRIS P1 TSL 1 (best) BASIC24.66■■□□□ 1.54
SLC6A12P48065 GABRA5-203ENST00000400081 2761 ntAPPRIS P1 TSL 5 BASIC24.66■■□□□ 1.54
SLC6A12P48065 TRADD-201ENST00000345057 1877 ntAPPRIS P1 TSL 1 (best) BASIC24.66■■□□□ 1.54
SLC6A12P48065 NRBF2-202ENST00000435510 1816 ntTSL 2 BASIC24.66■■□□□ 1.54
SLC6A12P48065 SNX15-202ENST00000377244 1939 ntAPPRIS P1 TSL 1 (best) BASIC24.66■■□□□ 1.54
SLC6A12P48065 PLSCR3-214ENST00000619711 2066 ntTSL 5 BASIC24.66■■□□□ 1.54
SLC6A12P48065 SV2B-203ENST00000545111 2099 ntTSL 2 BASIC24.65■■□□□ 1.54
SLC6A12P48065 SLC35D2-202ENST00000375257 889 ntTSL 2 BASIC24.65■■□□□ 1.54
SLC6A12P48065 GSX2-202ENST00000503800 1181 ntTSL 5 BASIC24.65■■□□□ 1.54
SLC6A12P48065 HOOK2-201ENST00000264827 2603 ntAPPRIS P1 TSL 1 (best) BASIC24.65■■□□□ 1.54
SLC6A12P48065 REXO4-201ENST00000371935 1899 ntTSL 3 BASIC24.64■■□□□ 1.54
SLC6A12P48065 SCCPDH-201ENST00000366510 2503 ntAPPRIS P1 TSL 1 (best) BASIC24.64■■□□□ 1.54
SLC6A12P48065 TMEM150A-202ENST00000334462 1518 ntAPPRIS P1 TSL 1 (best) BASIC24.64■■□□□ 1.53
SLC6A12P48065 LINC01003-201ENST00000564834 1764 ntBASIC24.64■■□□□ 1.53
SLC6A12P48065 OVOL2-201ENST00000278780 1555 ntAPPRIS P1 TSL 1 (best) BASIC24.63■■□□□ 1.53
SLC6A12P48065 SHOX2-201ENST00000389589 2072 ntAPPRIS P3 TSL 1 (best) BASIC24.63■■□□□ 1.53
SLC6A12P48065 GSC-201ENST00000238558 1264 ntAPPRIS P1 TSL 1 (best) BASIC24.63■■□□□ 1.53
SLC6A12P48065 NPHP3-202ENST00000383282 782 ntTSL 1 (best) BASIC24.63■■□□□ 1.53
SLC6A12P48065 MFSD12-202ENST00000389395 2039 ntAPPRIS ALT2 TSL 1 (best) BASIC24.62■■□□□ 1.53
SLC6A12P48065 AC116407.1-201ENST00000398832 1599 ntTSL 2 BASIC24.62■■□□□ 1.53
SLC6A12P48065 HDHD5-202ENST00000336737 1799 ntAPPRIS ALT2 TSL 1 (best) BASIC24.62■■□□□ 1.53
SLC6A12P48065 TMEM55B-201ENST00000250489 1961 ntAPPRIS P3 TSL 1 (best) BASIC24.62■■□□□ 1.53
SLC6A12P48065 HTR6-201ENST00000289753 1984 ntAPPRIS P1 TSL 1 (best) BASIC24.62■■□□□ 1.53
SLC6A12P48065 TCAM1P-201ENST00000463377 452 ntTSL 3 BASIC24.61■■□□□ 1.53
SLC6A12P48065 HGH1-207ENST00000628266 258 ntTSL 5 BASIC24.61■■□□□ 1.53
SLC6A12P48065 RHEB-201ENST00000262187 2075 ntAPPRIS P1 TSL 1 (best) BASIC24.6■■□□□ 1.53
SLC6A12P48065 AC004540.2-201ENST00000451368 611 ntTSL 2 BASIC24.6■■□□□ 1.53
SLC6A12P48065 WTAP-206ENST00000621533 2109 ntAPPRIS P1 TSL 2 BASIC24.59■■□□□ 1.53
SLC6A12P48065 DHRS13-202ENST00000394901 2037 ntTSL 1 (best) BASIC24.59■■□□□ 1.53
SLC6A12P48065 AP000251.1-201ENST00000433071 822 ntTSL 1 (best) BASIC24.59■■□□□ 1.53
SLC6A12P48065 VEGFC-202ENST00000618562 2064 ntAPPRIS P1 TSL 1 (best) BASIC24.58■■□□□ 1.53
SLC6A12P48065 LSM14B-204ENST00000370915 1079 ntTSL 1 (best) BASIC24.58■■□□□ 1.53
SLC6A12P48065 AC018358.1-201ENST00000631079 1402 ntBASIC24.58■■□□□ 1.53
SLC6A12P48065 C9orf40-201ENST00000376854 2327 ntAPPRIS P1 TSL 1 (best) BASIC24.57■■□□□ 1.52
SLC6A12P48065 HOXB3-201ENST00000311626 2642 ntAPPRIS P1 TSL 1 (best) BASIC24.57■■□□□ 1.52
SLC6A12P48065 TNIP2-201ENST00000315423 1974 ntAPPRIS P3 TSL 1 (best) BASIC24.57■■□□□ 1.52
SLC6A12P48065 BHLHE23-201ENST00000370346 1057 ntAPPRIS P1 BASIC24.56■■□□□ 1.52
SLC6A12P48065 PABPC1L2B-AS1-201ENST00000416989 1167 ntTSL 3 BASIC24.56■■□□□ 1.52
SLC6A12P48065 AL662864.1-201ENST00000454388 1167 ntTSL 3 BASIC24.56■■□□□ 1.52
SLC6A12P48065 SYT12-205ENST00000527043 1661 ntAPPRIS P1 TSL 1 (best) BASIC24.56■■□□□ 1.52
SLC6A12P48065 ZDHHC16-201ENST00000345745 1519 ntTSL 1 (best) BASIC24.56■■□□□ 1.52
SLC6A12P48065 SSBP3-202ENST00000357475 1533 ntTSL 1 (best) BASIC24.56■■□□□ 1.52
SLC6A12P48065 SHF-208ENST00000560734 1731 ntTSL 3 BASIC24.55■■□□□ 1.52
SLC6A12P48065 EXOC3-209ENST00000512944 2825 ntAPPRIS P1 TSL 1 (best) BASIC24.55■■□□□ 1.52
SLC6A12P48065 ZNF706-207ENST00000519882 959 ntAPPRIS P1 TSL 3 BASIC24.55■■□□□ 1.52
SLC6A12P48065 ZNF706-213ENST00000521272 732 ntAPPRIS P1 TSL 5 BASIC24.55■■□□□ 1.52
SLC6A12P48065 TCFL5-201ENST00000217162 2453 ntAPPRIS ALT2 TSL 1 (best) BASIC24.55■■□□□ 1.52
SLC6A12P48065 TCFL5-202ENST00000335351 2456 ntAPPRIS P2 TSL 1 (best) BASIC24.55■■□□□ 1.52
SLC6A12P48065 ANKRD65-205ENST00000537107 2190 ntAPPRIS P1 TSL 5 BASIC24.54■■□□□ 1.52
SLC6A12P48065 AC231981.1-201ENST00000450917 974 ntTSL 3 BASIC24.54■■□□□ 1.52
SLC6A12P48065 PICK1-201ENST00000356976 2055 ntAPPRIS P1 TSL 1 (best) BASIC24.54■■□□□ 1.52
SLC6A12P48065 DDAH2-212ENST00000375789 1688 ntAPPRIS P1 TSL 2 BASIC24.53■■□□□ 1.52
SLC6A12P48065 DDAH2-213ENST00000375792 1688 ntAPPRIS P1 TSL 1 (best) BASIC24.53■■□□□ 1.52
SLC6A12P48065 FAM120AOS-202ENST00000423591 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC24.53■■□□□ 1.52
SLC6A12P48065 MPST-206ENST00000429360 1331 ntTSL 1 (best) BASIC24.53■■□□□ 1.52
SLC6A12P48065 AC110285.7-201ENST00000624417 1536 ntBASIC24.52■■□□□ 1.52
SLC6A12P48065 TRAM2-AS1-201ENST00000453216 664 ntTSL 3 BASIC24.52■■□□□ 1.52
SLC6A12P48065 PSMG1-201ENST00000331573 2154 ntAPPRIS P1 TSL 1 (best) BASIC24.52■■□□□ 1.52
SLC6A12P48065 HAND2-201ENST00000359562 2780 ntAPPRIS P1 TSL 1 (best) BASIC24.51■■□□□ 1.51
SLC6A12P48065 IHH-201ENST00000295731 2023 ntAPPRIS P1 TSL 1 (best) BASIC24.51■■□□□ 1.51
SLC6A12P48065 PEX7-203ENST00000541292 945 ntTSL 5 BASIC24.51■■□□□ 1.51
SLC6A12P48065 MFSD12-201ENST00000355415 2124 ntAPPRIS P3 TSL 1 (best) BASIC24.5■■□□□ 1.51
SLC6A12P48065 ARHGDIG-201ENST00000219409 949 ntAPPRIS P1 TSL 1 (best) BASIC24.5■■□□□ 1.51
SLC6A12P48065 AL451007.3-201ENST00000640271 588 ntAPPRIS P1 BASIC24.5■■□□□ 1.51
SLC6A12P48065 NPDC1-201ENST00000371600 2187 ntAPPRIS ALT2 TSL 1 (best) BASIC24.5■■□□□ 1.51
SLC6A12P48065 C14orf80-203ENST00000354560 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC24.5■■□□□ 1.51
SLC6A12P48065 THRA-204ENST00000546243 1909 ntAPPRIS P1 TSL 2 BASIC24.49■■□□□ 1.51
SLC6A12P48065 REPIN1-204ENST00000466559 1022 ntTSL 1 (best) BASIC24.49■■□□□ 1.51
SLC6A12P48065 BCAP31-201ENST00000345046 1589 ntAPPRIS P1 TSL 1 (best) BASIC24.49■■□□□ 1.51
SLC6A12P48065 HIST2H3C-201ENST00000369158 1656 ntAPPRIS P1 BASIC24.49■■□□□ 1.51
SLC6A12P48065 HIST2H3A-201ENST00000403683 1656 ntAPPRIS P1 BASIC24.49■■□□□ 1.51
SLC6A12P48065 ZNF639-209ENST00000496856 2033 ntAPPRIS P1 TSL 1 (best) BASIC24.49■■□□□ 1.51
SLC6A12P48065 MLEC-202ENST00000412616 841 ntTSL 3 BASIC24.48■■□□□ 1.51
SLC6A12P48065 LINC01971-201ENST00000617888 1048 ntBASIC24.48■■□□□ 1.51
SLC6A12P48065 RTN2-202ENST00000344680 2063 ntAPPRIS P1 TSL 1 (best) BASIC24.47■■□□□ 1.51
SLC6A12P48065 C11orf95-204ENST00000546282 390 ntTSL 3 BASIC24.47■■□□□ 1.51
SLC6A12P48065 HDGFL1-201ENST00000510882 2174 ntAPPRIS P1 BASIC24.46■■□□□ 1.51
SLC6A12P48065 AC096888.1-201ENST00000487097 565 ntTSL 4 BASIC24.46■■□□□ 1.51
SLC6A12P48065 DDN-AS1-203ENST00000552284 934 ntTSL 3 BASIC24.46■■□□□ 1.51
SLC6A12P48065 TXNL4A-208ENST00000588162 752 ntTSL 2 BASIC24.46■■□□□ 1.51
SLC6A12P48065 FKBP1A-210ENST00000614856 562 ntTSL 2 BASIC24.46■■□□□ 1.51
SLC6A12P48065 ROM1-201ENST00000278833 1878 ntAPPRIS P2 TSL 1 (best) BASIC24.46■■□□□ 1.51
SLC6A12P48065 AL121749.1-202ENST00000609313 2153 ntBASIC24.46■■□□□ 1.51
SLC6A12P48065 RUNX2-203ENST00000371436 1588 ntAPPRIS ALT2 TSL 5 BASIC24.46■■□□□ 1.51
SLC6A12P48065 SLC25A6-201ENST00000381401 2062 ntAPPRIS P1 TSL 1 (best) BASIC24.46■■□□□ 1.51
SLC6A12P48065 DCDC2C-201ENST00000399143 1476 ntAPPRIS P1 TSL 5 BASIC24.45■■□□□ 1.51
SLC6A12P48065 HOMER3-202ENST00000392351 1557 ntAPPRIS P3 TSL 1 (best) BASIC24.45■■□□□ 1.5
SLC6A12P48065 ACAA1-220ENST00000627515 1862 ntTSL 5 BASIC24.45■■□□□ 1.5
SLC6A12P48065 CD6-206ENST00000452451 1782 ntAPPRIS ALT2 TSL 1 (best) BASIC24.44■■□□□ 1.5
SLC6A12P48065 HSPB11-201ENST00000194214 915 ntAPPRIS P1 TSL 1 (best) BASIC24.44■■□□□ 1.5
SLC6A12P48065 ZFAND2B-206ENST00000409336 944 ntAPPRIS P1 TSL 5 BASIC24.44■■□□□ 1.5
SLC6A12P48065 ZFAND2B-221ENST00000621130 1070 ntTSL 5 BASIC24.44■■□□□ 1.5
SLC6A12P48065 TAZ-201ENST00000369776 1596 ntTSL 1 (best) BASIC24.44■■□□□ 1.5
SLC6A12P48065 RHOC-202ENST00000339083 1418 ntAPPRIS P1 TSL 1 (best) BASIC24.44■■□□□ 1.5
SLC6A12P48065 DCUN1D5-201ENST00000260247 1337 ntAPPRIS P1 TSL 1 (best) BASIC24.43■■□□□ 1.5
SLC6A12P48065 TMEM147-202ENST00000392204 935 ntTSL 2 BASIC24.43■■□□□ 1.5
SLC6A12P48065 FBXL8-206ENST00000519917 1460 ntAPPRIS P1 TSL 5 BASIC24.43■■□□□ 1.5
SLC6A12P48065 UCK1-204ENST00000372215 2167 ntAPPRIS P1 TSL 1 (best) BASIC24.43■■□□□ 1.5
SLC6A12P48065 NDEL1-202ENST00000380025 2181 ntTSL 5 BASIC24.43■■□□□ 1.5
SLC6A12P48065 ANKRD16-201ENST00000191063 1567 ntTSL 3 BASIC24.42■■□□□ 1.5
Retrieved 100 of 98,524 protein–RNA pairs in 48 ms