Protein–RNA interactions for Protein: P16112

ACAN, Aggrecan core protein, humanhuman

Predictions only

Length 2,415 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ACANP16112 TCEA2-204ENST00000395053 1733 ntTSL 1 (best) BASIC21.33■■□□□ 1
ACANP16112 RASGRP2-204ENST00000377487 642 ntTSL 2 BASIC21.33■■□□□ 1
ACANP16112 ANGPTL6-204ENST00000592641 1781 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
ACANP16112 OXLD1-201ENST00000374741 620 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
ACANP16112 AC064853.2-201ENST00000641246 144 ntAPPRIS P1 BASIC21.32■■□□□ 1
ACANP16112 TOMM40-201ENST00000252487 1707 ntAPPRIS P2 TSL 1 (best) BASIC21.32■■□□□ 1
ACANP16112 TOMM40-202ENST00000405636 1709 ntAPPRIS P2 TSL 1 (best) BASIC21.32■■□□□ 1
ACANP16112 ADRA2C-202ENST00000509482 1600 ntTSL 3 BASIC21.31■■□□□ 1
ACANP16112 YIF1A-201ENST00000359461 943 ntTSL 2 BASIC21.31■■□□□ 1
ACANP16112 YIF1A-203ENST00000376901 1124 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
ACANP16112 WHAMMP2-203ENST00000563942 1603 ntBASIC21.3■■□□□ 1
ACANP16112 GAL3ST3-203ENST00000527878 1599 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
ACANP16112 MOB2-207ENST00000614710 705 ntTSL 5 BASIC21.3■■□□□ 1
ACANP16112 SAMD1-202ENST00000533683 2164 ntAPPRIS P5 TSL 1 (best) BASIC21.3■■□□□ 1
ACANP16112 CDC34-201ENST00000215574 1471 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
ACANP16112 HOMER3-202ENST00000392351 1557 ntAPPRIS P3 TSL 1 (best) BASIC21.29■■□□□ 1
ACANP16112 LY6H-201ENST00000342752 951 ntAPPRIS ALT2 TSL 1 (best) BASIC21.29■■□□□ 1
ACANP16112 LY6H-202ENST00000414417 1056 ntAPPRIS ALT2 TSL 1 (best) BASIC21.29■■□□□ 1
ACANP16112 LY6H-203ENST00000430474 925 ntAPPRIS P3 TSL 3 BASIC21.29■■□□□ 1
ACANP16112 FAM120C-203ENST00000477084 1140 ntAPPRIS ALT2 TSL 1 (best) BASIC21.29■■□□□ 1
ACANP16112 ATXN3-252ENST00000620536 1044 ntTSL 5 BASIC21.29■■□□□ 1
ACANP16112 ATXN3-253ENST00000621269 936 ntTSL 5 BASIC21.29■■□□□ 1
ACANP16112 C7orf50-202ENST00000397098 2131 ntAPPRIS P2 TSL 1 (best) BASIC21.29■■□□□ 1
ACANP16112 FTCD-202ENST00000397743 1834 ntTSL 1 (best) BASIC21.29■■□□□ 1
ACANP16112 TMEM54-201ENST00000329151 871 ntTSL 1 (best) BASIC21.28■■□□□ 1
ACANP16112 RPS2-210ENST00000530225 765 ntTSL 2 BASIC21.28■■□□□ 1
ACANP16112 AC133552.2-201ENST00000619106 1032 ntBASIC21.28■■□□□ 1
ACANP16112 COQ2-202ENST00000311469 1641 ntAPPRIS P2 TSL 1 (best) BASIC21.27■■□□□ 1
ACANP16112 GUSBP5-201ENST00000418136 578 ntBASIC21.27■■□□□ 1
ACANP16112 ECEL1P2-201ENST00000461596 1295 ntBASIC21.27■■□□□ 1
ACANP16112 AC093390.2-201ENST00000638628 1007 ntTSL 5 BASIC21.27■■□□□ 1
ACANP16112 AC135983.2-203ENST00000454486 1613 ntBASIC21.27■■□□□ 1
ACANP16112 EIF5A-211ENST00000576930 1439 ntAPPRIS P1 TSL 5 BASIC21.27■■□□□ 1
ACANP16112 CDKN2B-202ENST00000380142 859 ntTSL 1 (best) BASIC21.27■■□□□ 1
ACANP16112 THA1P-201ENST00000590384 1145 ntBASIC21.26■□□□□ 0.99
ACANP16112 AVEN-201ENST00000306730 1605 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
ACANP16112 CCER2-201ENST00000571838 1057 ntAPPRIS P2 TSL 5 BASIC21.26■□□□□ 0.99
ACANP16112 C16orf95-201ENST00000253461 953 ntAPPRIS P3 TSL 1 (best) BASIC21.25■□□□□ 0.99
ACANP16112 GSX2-202ENST00000503800 1181 ntTSL 5 BASIC21.25■□□□□ 0.99
ACANP16112 ENKD1-201ENST00000243878 1579 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
ACANP16112 PPP3CC-204ENST00000518852 1598 ntTSL 2 BASIC21.25■□□□□ 0.99
ACANP16112 PI4KAP1-202ENST00000611748 1906 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
ACANP16112 AQP1-203ENST00000409899 1009 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
ACANP16112 AL121899.1-202ENST00000411839 536 ntTSL 5 BASIC21.25■□□□□ 0.99
ACANP16112 AL157400.5-201ENST00000507624 621 ntBASIC21.25■□□□□ 0.99
ACANP16112 AC053527.1-201ENST00000502790 685 ntTSL 3 BASIC21.24■□□□□ 0.99
ACANP16112 KRT8P33-201ENST00000508125 1423 ntBASIC21.24■□□□□ 0.99
ACANP16112 STUB1-205ENST00000565677 1560 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
ACANP16112 ABHD17A-202ENST00000292577 1757 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
ACANP16112 AC009511.2-201ENST00000545904 679 ntTSL 2 BASIC21.24■□□□□ 0.99
ACANP16112 EPB41L4A-AS2-201ENST00000623705 1396 ntBASIC21.23■□□□□ 0.99
ACANP16112 CTAG1B-201ENST00000328435 748 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
ACANP16112 CTAG1A-202ENST00000599837 748 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
ACANP16112 MARCKSL1-201ENST00000329421 1699 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
ACANP16112 SNTG2-201ENST00000308624 1888 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
ACANP16112 C16orf52-207ENST00000569656 1257 ntTSL 5 BASIC21.23■□□□□ 0.99
ACANP16112 KCTD15-206ENST00000588881 1211 ntAPPRIS P1 TSL 2 BASIC21.23■□□□□ 0.99
ACANP16112 RAET1E-AS1-203ENST00000606915 1210 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
ACANP16112 PELI3-203ENST00000524466 1671 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
ACANP16112 SOD3-201ENST00000382120 1526 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
ACANP16112 FAM78B-201ENST00000338353 1597 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
ACANP16112 MDK-203ENST00000395566 828 ntAPPRIS P2 TSL 1 (best) BASIC21.22■□□□□ 0.99
ACANP16112 MED25-210ENST00000612854 801 ntTSL 5 BASIC21.22■□□□□ 0.99
ACANP16112 MED25-213ENST00000620467 1293 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
ACANP16112 MED25-214ENST00000622402 642 ntTSL 5 BASIC21.22■□□□□ 0.99
ACANP16112 AC009831.1-201ENST00000580420 1582 ntBASIC21.21■□□□□ 0.99
ACANP16112 TPI1-210ENST00000613953 1460 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
ACANP16112 PLA2G10-201ENST00000438167 1000 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
ACANP16112 DUX4L9-201ENST00000449051 1259 ntBASIC21.21■□□□□ 0.99
ACANP16112 IZUMO4-202ENST00000395301 1021 ntAPPRIS ALT2 TSL 1 (best) BASIC21.2■□□□□ 0.99
ACANP16112 C17orf49-201ENST00000439424 850 ntAPPRIS P3 TSL 1 (best) BASIC21.2■□□□□ 0.99
ACANP16112 IGFBP7-201ENST00000295666 1427 ntAPPRIS P3 TSL 1 (best) BASIC21.2■□□□□ 0.98
ACANP16112 AC010864.1-201ENST00000609407 1511 ntBASIC21.2■□□□□ 0.98
ACANP16112 AC110285.7-201ENST00000624417 1536 ntBASIC21.2■□□□□ 0.98
ACANP16112 FLVCR1-AS1-203ENST00000426161 892 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
ACANP16112 TCEA1-214ENST00000640382 1234 ntTSL 5 BASIC21.2■□□□□ 0.98
ACANP16112 DEXI-202ENST00000469379 1393 ntAPPRIS P1 TSL 2 BASIC21.2■□□□□ 0.98
ACANP16112 RDX-206ENST00000528900 1814 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
ACANP16112 AL592293.1-201ENST00000502889 1188 ntBASIC21.19■□□□□ 0.98
ACANP16112 SSBP4-201ENST00000270061 1768 ntAPPRIS P3 TSL 1 (best) BASIC21.19■□□□□ 0.98
ACANP16112 RP9P-202ENST00000450133 1212 ntBASIC21.19■□□□□ 0.98
ACANP16112 MAP4K3-211ENST00000484274 407 ntTSL 2 BASIC21.19■□□□□ 0.98
ACANP16112 PLEKHJ1-213ENST00000591099 1092 ntTSL 2 BASIC21.19■□□□□ 0.98
ACANP16112 PSMG3-202ENST00000288607 1391 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
ACANP16112 TPRA1-201ENST00000296210 1725 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
ACANP16112 ZFAND2B-201ENST00000289528 1314 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
ACANP16112 PTRH1-208ENST00000543175 814 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
ACANP16112 AC007029.1-201ENST00000604183 313 ntBASIC21.18■□□□□ 0.98
ACANP16112 ARL8A-204ENST00000614750 1727 ntTSL 3 BASIC21.18■□□□□ 0.98
ACANP16112 GKAP1-203ENST00000376371 1778 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
ACANP16112 C9orf147-202ENST00000457681 561 ntTSL 2 BASIC21.18■□□□□ 0.98
ACANP16112 AL161658.1-201ENST00000623641 1967 ntBASIC21.17■□□□□ 0.98
ACANP16112 AC116025.2-201ENST00000576632 443 ntTSL 3 BASIC21.17■□□□□ 0.98
ACANP16112 REST-210ENST00000638187 1334 ntTSL 5 BASIC21.17■□□□□ 0.98
ACANP16112 WBP1-201ENST00000233615 1294 ntAPPRIS P2 TSL 1 (best) BASIC21.17■□□□□ 0.98
ACANP16112 AL356441.2-201ENST00000443009 864 ntBASIC21.17■□□□□ 0.98
ACANP16112 DCDC2C-201ENST00000399143 1476 ntAPPRIS P1 TSL 5 BASIC21.17■□□□□ 0.98
ACANP16112 ZNF470-206ENST00000601902 1640 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
ACANP16112 HSD11B1L-202ENST00000339423 1660 ntAPPRIS P3 TSL 1 (best) BASIC21.16■□□□□ 0.98
ACANP16112 AC010980.1-201ENST00000587192 1142 ntBASIC21.16■□□□□ 0.98
Retrieved 100 of 98,524 protein–RNA pairs in 40.8 ms