Protein–RNA interactions for Protein: O00442

RTCA, RNA 3'-terminal phosphate cyclase, humanhuman

Known RBP Predictions only

Length 366 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTCAO00442 AP000251.1-201ENST00000433071 822 ntTSL 1 (best) BASIC24.26■■□□□ 1.47
RTCAO00442 FAH-213ENST00000561421 1549 ntAPPRIS P1 TSL 1 (best) BASIC24.25■■□□□ 1.47
RTCAO00442 HOXB3-201ENST00000311626 2642 ntAPPRIS P1 TSL 1 (best) BASIC24.25■■□□□ 1.47
RTCAO00442 SNX15-202ENST00000377244 1939 ntAPPRIS P1 TSL 1 (best) BASIC24.24■■□□□ 1.47
RTCAO00442 SLC16A3-214ENST00000582743 2002 ntAPPRIS P1 TSL 1 (best) BASIC24.24■■□□□ 1.47
RTCAO00442 TCAM1P-201ENST00000463377 452 ntTSL 3 BASIC24.24■■□□□ 1.47
RTCAO00442 C2orf88-204ENST00000409870 1441 ntAPPRIS P1 TSL 2 BASIC24.24■■□□□ 1.47
RTCAO00442 HYAL2-202ENST00000395139 2136 ntAPPRIS P1 TSL 1 (best) BASIC24.23■■□□□ 1.47
RTCAO00442 ARHGDIG-201ENST00000219409 949 ntAPPRIS P1 TSL 1 (best) BASIC24.23■■□□□ 1.47
RTCAO00442 PROC-203ENST00000409048 1586 ntTSL 5 BASIC24.23■■□□□ 1.47
RTCAO00442 FEZ1-201ENST00000278919 1748 ntAPPRIS P1 TSL 1 (best) BASIC24.23■■□□□ 1.47
RTCAO00442 ARPC5L-202ENST00000353214 2507 ntAPPRIS P1 TSL 2 BASIC24.22■■□□□ 1.47
RTCAO00442 ST6GALNAC6-205ENST00000373146 2460 ntAPPRIS P3 TSL 1 (best) BASIC24.22■■□□□ 1.47
RTCAO00442 EVC-203ENST00000509451 1960 ntTSL 1 (best) BASIC24.22■■□□□ 1.47
RTCAO00442 TMEM187-201ENST00000369982 1880 ntAPPRIS P1 TSL 1 (best) BASIC24.22■■□□□ 1.47
RTCAO00442 TBCC-201ENST00000372876 1616 ntAPPRIS P1 BASIC24.21■■□□□ 1.47
RTCAO00442 OVOL2-201ENST00000278780 1555 ntAPPRIS P1 TSL 1 (best) BASIC24.21■■□□□ 1.47
RTCAO00442 ZNRF2P2-203ENST00000454624 420 ntBASIC24.21■■□□□ 1.47
RTCAO00442 GSX2-202ENST00000503800 1181 ntTSL 5 BASIC24.21■■□□□ 1.47
RTCAO00442 TMEM150A-202ENST00000334462 1518 ntAPPRIS P1 TSL 1 (best) BASIC24.2■■□□□ 1.47
RTCAO00442 EIF5A-202ENST00000336458 1511 ntAPPRIS P1 TSL 1 (best) BASIC24.2■■□□□ 1.47
RTCAO00442 GSX1-201ENST00000302945 1663 ntAPPRIS P1 TSL 1 (best) BASIC24.2■■□□□ 1.46
RTCAO00442 MFSD12-202ENST00000389395 2039 ntAPPRIS ALT2 TSL 1 (best) BASIC24.2■■□□□ 1.46
RTCAO00442 GSR-206ENST00000546342 1482 ntAPPRIS ALT2 TSL 1 (best) BASIC24.19■■□□□ 1.46
RTCAO00442 AP002414.2-202ENST00000590929 1450 ntBASIC24.19■■□□□ 1.46
RTCAO00442 MAPKAPK2-201ENST00000294981 2171 ntTSL 1 (best) BASIC24.19■■□□□ 1.46
RTCAO00442 PLSCR3-202ENST00000535512 2067 ntAPPRIS P1 TSL 1 (best) BASIC24.19■■□□□ 1.46
RTCAO00442 ABHD17AP4-201ENST00000411545 909 ntBASIC24.19■■□□□ 1.46
RTCAO00442 AC096888.1-201ENST00000487097 565 ntTSL 4 BASIC24.19■■□□□ 1.46
RTCAO00442 C17orf97-201ENST00000360127 1839 ntAPPRIS P2 TSL 1 (best) BASIC24.19■■□□□ 1.46
RTCAO00442 ZDHHC16-201ENST00000345745 1519 ntTSL 1 (best) BASIC24.18■■□□□ 1.46
RTCAO00442 HTR6-201ENST00000289753 1984 ntAPPRIS P1 TSL 1 (best) BASIC24.18■■□□□ 1.46
RTCAO00442 RUNX2-203ENST00000371436 1588 ntAPPRIS ALT2 TSL 5 BASIC24.17■■□□□ 1.46
RTCAO00442 CAPNS1-201ENST00000246533 1918 ntAPPRIS P2 TSL 1 (best) BASIC24.17■■□□□ 1.46
RTCAO00442 TMEM200C-201ENST00000383490 1920 ntAPPRIS P1 BASIC24.17■■□□□ 1.46
RTCAO00442 LINC01971-201ENST00000617888 1048 ntBASIC24.16■■□□□ 1.46
RTCAO00442 PLEKHF1-201ENST00000436066 2084 ntAPPRIS P1 TSL 1 (best) BASIC24.15■■□□□ 1.46
RTCAO00442 SSBP3-202ENST00000357475 1533 ntTSL 1 (best) BASIC24.15■■□□□ 1.46
RTCAO00442 DDAH2-212ENST00000375789 1688 ntAPPRIS P1 TSL 2 BASIC24.15■■□□□ 1.46
RTCAO00442 DDAH2-213ENST00000375792 1688 ntAPPRIS P1 TSL 1 (best) BASIC24.15■■□□□ 1.46
RTCAO00442 AC231981.1-201ENST00000450917 974 ntTSL 3 BASIC24.15■■□□□ 1.46
RTCAO00442 DDN-AS1-203ENST00000552284 934 ntTSL 3 BASIC24.15■■□□□ 1.46
RTCAO00442 UBALD1-202ENST00000587615 799 ntTSL 2 BASIC24.15■■□□□ 1.46
RTCAO00442 SV2B-203ENST00000545111 2099 ntTSL 2 BASIC24.15■■□□□ 1.46
RTCAO00442 AC110285.7-201ENST00000624417 1536 ntBASIC24.15■■□□□ 1.46
RTCAO00442 NRBF2-202ENST00000435510 1816 ntTSL 2 BASIC24.14■■□□□ 1.46
RTCAO00442 LAPTM4B-203ENST00000521545 915 ntAPPRIS P1 TSL 1 (best) BASIC24.14■■□□□ 1.45
RTCAO00442 C11orf95-204ENST00000546282 390 ntTSL 3 BASIC24.14■■□□□ 1.45
RTCAO00442 ABHD17C-202ENST00000558464 1976 ntTSL 1 (best) BASIC24.14■■□□□ 1.45
RTCAO00442 CCDC61-204ENST00000595358 1817 ntAPPRIS P2 TSL 5 BASIC24.14■■□□□ 1.45
RTCAO00442 AP003068.2-202ENST00000526623 1662 ntTSL 2 BASIC24.14■■□□□ 1.45
RTCAO00442 C11orf80-218ENST00000540737 1786 ntAPPRIS ALT2 TSL 2 BASIC24.13■■□□□ 1.45
RTCAO00442 WTAP-206ENST00000621533 2109 ntAPPRIS P1 TSL 2 BASIC24.12■■□□□ 1.45
RTCAO00442 RHOC-202ENST00000339083 1418 ntAPPRIS P1 TSL 1 (best) BASIC24.11■■□□□ 1.45
RTCAO00442 CHML-204ENST00000638121 920 ntTSL 2 BASIC24.11■■□□□ 1.45
RTCAO00442 CDH24-206ENST00000610348 2037 ntTSL 1 (best) BASIC24.11■■□□□ 1.45
RTCAO00442 ANKRD65-205ENST00000537107 2190 ntAPPRIS P1 TSL 5 BASIC24.1■■□□□ 1.45
RTCAO00442 DUX4L11-201ENST00000611504 1267 ntBASIC24.1■■□□□ 1.45
RTCAO00442 DUX4L12-201ENST00000614593 1267 ntBASIC24.1■■□□□ 1.45
RTCAO00442 FKBP1A-210ENST00000614856 562 ntTSL 2 BASIC24.1■■□□□ 1.45
RTCAO00442 DUX4L14-201ENST00000621227 1267 ntBASIC24.1■■□□□ 1.45
RTCAO00442 TCFL5-201ENST00000217162 2453 ntAPPRIS ALT2 TSL 1 (best) BASIC24.09■■□□□ 1.45
RTCAO00442 TCFL5-202ENST00000335351 2456 ntAPPRIS P2 TSL 1 (best) BASIC24.09■■□□□ 1.45
RTCAO00442 REXO4-201ENST00000371935 1899 ntTSL 3 BASIC24.09■■□□□ 1.45
RTCAO00442 HS3ST6-201ENST00000454677 1273 ntAPPRIS P1 TSL 1 (best) BASIC24.09■■□□□ 1.45
RTCAO00442 EXOC3-209ENST00000512944 2825 ntAPPRIS P1 TSL 1 (best) BASIC24.09■■□□□ 1.45
RTCAO00442 SYT12-205ENST00000527043 1661 ntAPPRIS P1 TSL 1 (best) BASIC24.08■■□□□ 1.45
RTCAO00442 EBPL-201ENST00000242827 914 ntAPPRIS P1 TSL 1 (best) BASIC24.08■■□□□ 1.45
RTCAO00442 BX255925.1-201ENST00000566954 1854 ntBASIC24.08■■□□□ 1.45
RTCAO00442 LINC01003-201ENST00000564834 1764 ntBASIC24.08■■□□□ 1.44
RTCAO00442 C5orf66-AS1-201ENST00000507035 843 ntTSL 2 BASIC24.07■■□□□ 1.44
RTCAO00442 VEGFC-202ENST00000618562 2064 ntAPPRIS P1 TSL 1 (best) BASIC24.07■■□□□ 1.44
RTCAO00442 CARM1-202ENST00000344150 2722 ntAPPRIS ALT2 TSL 5 BASIC24.07■■□□□ 1.44
RTCAO00442 ANKRD16-201ENST00000191063 1567 ntTSL 3 BASIC24.07■■□□□ 1.44
RTCAO00442 ARHGEF7-206ENST00000375741 5525 ntTSL 1 (best) BASIC24.07■■□□□ 1.44
RTCAO00442 TRADD-201ENST00000345057 1877 ntAPPRIS P1 TSL 1 (best) BASIC24.07■■□□□ 1.44
RTCAO00442 DCDC2C-201ENST00000399143 1476 ntAPPRIS P1 TSL 5 BASIC24.07■■□□□ 1.44
RTCAO00442 HIST2H3C-201ENST00000369158 1656 ntAPPRIS P1 BASIC24.06■■□□□ 1.44
RTCAO00442 HIST2H3A-201ENST00000403683 1656 ntAPPRIS P1 BASIC24.06■■□□□ 1.44
RTCAO00442 TMEM55B-201ENST00000250489 1961 ntAPPRIS P3 TSL 1 (best) BASIC24.06■■□□□ 1.44
RTCAO00442 DUX4L13-201ENST00000554103 1267 ntBASIC24.06■■□□□ 1.44
RTCAO00442 DUX4L15-201ENST00000611059 1267 ntBASIC24.06■■□□□ 1.44
RTCAO00442 DUX4L23-201ENST00000615195 1269 ntBASIC24.06■■□□□ 1.44
RTCAO00442 DUX4L24-201ENST00000617576 1269 ntBASIC24.06■■□□□ 1.44
RTCAO00442 DUX4L22-201ENST00000618238 1269 ntBASIC24.06■■□□□ 1.44
RTCAO00442 DUX4L20-201ENST00000619712 1269 ntBASIC24.06■■□□□ 1.44
RTCAO00442 DUX4L21-201ENST00000622058 1269 ntBASIC24.06■■□□□ 1.44
RTCAO00442 DUX4L10-201ENST00000622460 1267 ntBASIC24.06■■□□□ 1.44
RTCAO00442 DUX4L25-201ENST00000624915 1269 ntBASIC24.06■■□□□ 1.44
RTCAO00442 HOMER3-202ENST00000392351 1557 ntAPPRIS P3 TSL 1 (best) BASIC24.06■■□□□ 1.44
RTCAO00442 C9orf40-201ENST00000376854 2327 ntAPPRIS P1 TSL 1 (best) BASIC24.06■■□□□ 1.44
RTCAO00442 RRAD-202ENST00000420652 1476 ntAPPRIS P1 TSL 1 (best) BASIC24.06■■□□□ 1.44
RTCAO00442 TMEM147-202ENST00000392204 935 ntTSL 2 BASIC24.05■■□□□ 1.44
RTCAO00442 PEX7-203ENST00000541292 945 ntTSL 5 BASIC24.05■■□□□ 1.44
RTCAO00442 PIP4K2B-204ENST00000619039 5734 ntAPPRIS P1 TSL 1 (best) BASIC24.05■■□□□ 1.44
RTCAO00442 SHOX2-201ENST00000389589 2072 ntAPPRIS P3 TSL 1 (best) BASIC24.04■■□□□ 1.44
RTCAO00442 HDHD5-202ENST00000336737 1799 ntAPPRIS ALT2 TSL 1 (best) BASIC24.04■■□□□ 1.44
RTCAO00442 RANBP1-202ENST00000402752 1132 ntAPPRIS ALT1 TSL 1 (best) BASIC24.04■■□□□ 1.44
RTCAO00442 MTMR1-214ENST00000542156 1227 ntTSL 1 (best) BASIC24.03■■□□□ 1.44
RTCAO00442 PAPD7-201ENST00000230859 5459 ntTSL 1 (best) BASIC24.03■■□□□ 1.44
Retrieved 100 of 98,524 protein–RNA pairs in 18.2 ms