Protein–RNA interactions for Protein: A0A1W2PRY6

SMIM27, Small integral membrane protein 27 (Fragment), humanhuman

Predictions only

Length 76 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMIM27A0A1W2PRY6 NRGN-201ENST00000284292 1306 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
SMIM27A0A1W2PRY6 CATIP-201ENST00000289388 1323 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
SMIM27A0A1W2PRY6 NPAS3-206ENST00000548645 2926 ntAPPRIS ALT2 TSL 1 (best) BASIC19.05■□□□□ 0.64
SMIM27A0A1W2PRY6 GTPBP3-203ENST00000361619 1894 ntTSL 2 BASIC19.05■□□□□ 0.64
SMIM27A0A1W2PRY6 KAT8-206ENST00000543774 1846 ntAPPRIS P1 TSL 5 BASIC19.04■□□□□ 0.64
SMIM27A0A1W2PRY6 DNPEP-201ENST00000273075 2425 ntAPPRIS P3 TSL 1 (best) BASIC19.04■□□□□ 0.64
SMIM27A0A1W2PRY6 PCYT2-202ENST00000538721 1765 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
SMIM27A0A1W2PRY6 UBE2J2-202ENST00000349431 1733 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
SMIM27A0A1W2PRY6 STUB1-205ENST00000565677 1560 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
SMIM27A0A1W2PRY6 FGF2-203ENST00000614010 867 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
SMIM27A0A1W2PRY6 NRXN1-205ENST00000401710 2873 ntTSL 5 BASIC19.03■□□□□ 0.64
SMIM27A0A1W2PRY6 LTK-203ENST00000453182 2412 ntTSL 2 BASIC19.03■□□□□ 0.64
SMIM27A0A1W2PRY6 AC079848.1-201ENST00000511301 327 ntTSL 3 BASIC19.03■□□□□ 0.64
SMIM27A0A1W2PRY6 AGPAT2-202ENST00000371696 1512 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
SMIM27A0A1W2PRY6 HAS1-205ENST00000601714 2086 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
SMIM27A0A1W2PRY6 PINK1-201ENST00000321556 2660 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
SMIM27A0A1W2PRY6 MAGI2-215ENST00000628980 6212 ntTSL 5 BASIC19.02■□□□□ 0.64
SMIM27A0A1W2PRY6 TRIOBP-203ENST00000403663 2324 ntAPPRIS ALT2 TSL 1 (best) BASIC19.02■□□□□ 0.64
SMIM27A0A1W2PRY6 GDF1-201ENST00000247005 2517 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.63
SMIM27A0A1W2PRY6 CERS1-204ENST00000623882 2517 ntTSL 1 (best) BASIC19.02■□□□□ 0.63
SMIM27A0A1W2PRY6 HNRNPL-201ENST00000221419 2471 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
SMIM27A0A1W2PRY6 ATP5G2-201ENST00000338662 1792 ntTSL 2 BASIC19.01■□□□□ 0.63
SMIM27A0A1W2PRY6 PDIA6-201ENST00000272227 2338 ntAPPRIS P3 TSL 1 (best) BASIC19.01■□□□□ 0.63
SMIM27A0A1W2PRY6 PICALM-202ENST00000393346 2340 ntAPPRIS P3 TSL 1 (best) BASIC19.01■□□□□ 0.63
SMIM27A0A1W2PRY6 MAZ-203ENST00000545521 2333 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
SMIM27A0A1W2PRY6 HABP4-202ENST00000375251 2304 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
SMIM27A0A1W2PRY6 CDPF1-201ENST00000314567 1875 ntAPPRIS P2 TSL 1 (best) BASIC19.01■□□□□ 0.63
SMIM27A0A1W2PRY6 PRELID2-207ENST00000511435 1894 ntAPPRIS ALT1 TSL 2 BASIC19.01■□□□□ 0.63
SMIM27A0A1W2PRY6 DHFR-203ENST00000505337 1719 ntAPPRIS P1 TSL 2 BASIC19■□□□□ 0.63
SMIM27A0A1W2PRY6 DLX2-202ENST00000466293 1852 ntTSL 2 BASIC19■□□□□ 0.63
SMIM27A0A1W2PRY6 ATP5G2-208ENST00000552242 1950 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
SMIM27A0A1W2PRY6 SV2B-203ENST00000545111 2099 ntTSL 2 BASIC19■□□□□ 0.63
SMIM27A0A1W2PRY6 SIN3B-209ENST00000596802 2556 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
SMIM27A0A1W2PRY6 ECI1-207ENST00000570258 1512 ntAPPRIS ALT2 TSL 5 BASIC18.99■□□□□ 0.63
SMIM27A0A1W2PRY6 NRG1-210ENST00000520407 1955 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
SMIM27A0A1W2PRY6 NRARP-201ENST00000356628 1770 ntAPPRIS P1 BASIC18.98■□□□□ 0.63
SMIM27A0A1W2PRY6 PWWP2B-201ENST00000305233 2651 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
SMIM27A0A1W2PRY6 CTBP2-211ENST00000494626 2014 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
SMIM27A0A1W2PRY6 CYS1-201ENST00000381813 2738 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
SMIM27A0A1W2PRY6 PCYT2-203ENST00000538936 5147 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
SMIM27A0A1W2PRY6 IRAK1-205ENST00000429936 2127 ntTSL 5 BASIC18.97■□□□□ 0.63
SMIM27A0A1W2PRY6 TMEM185A-208ENST00000611119 2662 ntTSL 2 BASIC18.97■□□□□ 0.63
SMIM27A0A1W2PRY6 FLT1-202ENST00000539099 1911 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
SMIM27A0A1W2PRY6 GSX1-201ENST00000302945 1663 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
SMIM27A0A1W2PRY6 GRK6-206ENST00000507633 1660 ntTSL 5 BASIC18.97■□□□□ 0.63
SMIM27A0A1W2PRY6 LINC00588-201ENST00000521663 1875 ntTSL 2 BASIC18.97■□□□□ 0.63
SMIM27A0A1W2PRY6 TRIM54-201ENST00000296098 2027 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
SMIM27A0A1W2PRY6 TBCC-201ENST00000372876 1616 ntAPPRIS P1 BASIC18.96■□□□□ 0.63
SMIM27A0A1W2PRY6 DYRK1B-201ENST00000323039 2535 ntAPPRIS P3 TSL 1 (best) BASIC18.95■□□□□ 0.62
SMIM27A0A1W2PRY6 GSTZ1-201ENST00000216465 1338 ntAPPRIS P2 TSL 1 (best) BASIC18.95■□□□□ 0.62
SMIM27A0A1W2PRY6 RABL6-202ENST00000357466 1820 ntAPPRIS ALT2 TSL 1 (best) BASIC18.95■□□□□ 0.62
SMIM27A0A1W2PRY6 KLF15-201ENST00000296233 2574 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
SMIM27A0A1W2PRY6 CDK9-201ENST00000373264 2463 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
SMIM27A0A1W2PRY6 CCNYL1-203ENST00000392209 1952 ntTSL 2 BASIC18.94■□□□□ 0.62
SMIM27A0A1W2PRY6 FOXF2-201ENST00000259806 2187 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
SMIM27A0A1W2PRY6 WASH5P-204ENST00000632292 975 ntBASIC18.94■□□□□ 0.62
SMIM27A0A1W2PRY6 BAMBI-201ENST00000375533 1877 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
SMIM27A0A1W2PRY6 RUNX2-210ENST00000576263 2256 ntTSL 5 BASIC18.94■□□□□ 0.62
SMIM27A0A1W2PRY6 CD6-206ENST00000452451 1782 ntAPPRIS ALT2 TSL 1 (best) BASIC18.93■□□□□ 0.62
SMIM27A0A1W2PRY6 OSBP-201ENST00000263847 5083 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
SMIM27A0A1W2PRY6 NFKBIE-201ENST00000275015 2581 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
SMIM27A0A1W2PRY6 USP25-203ENST00000351097 2158 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
SMIM27A0A1W2PRY6 FKBP1A-205ENST00000439640 1583 ntTSL 3 BASIC18.93■□□□□ 0.62
SMIM27A0A1W2PRY6 SPIRE2-205ENST00000563972 1823 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
SMIM27A0A1W2PRY6 MORF4L1-203ENST00000426013 1880 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
SMIM27A0A1W2PRY6 NECTIN2-202ENST00000252485 2112 ntAPPRIS P3 TSL 1 (best) BASIC18.92■□□□□ 0.62
SMIM27A0A1W2PRY6 BTBD2-201ENST00000255608 2649 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
SMIM27A0A1W2PRY6 GTPBP3-202ENST00000358792 1951 ntAPPRIS P4 TSL 2 BASIC18.92■□□□□ 0.62
SMIM27A0A1W2PRY6 DUSP8P4-201ENST00000399538 1761 ntBASIC18.91■□□□□ 0.62
SMIM27A0A1W2PRY6 FOXA2-201ENST00000377115 2401 ntAPPRIS P3 TSL 1 (best) BASIC18.91■□□□□ 0.62
SMIM27A0A1W2PRY6 EZH2-208ENST00000483967 2466 ntAPPRIS ALT1 TSL 2 BASIC18.91■□□□□ 0.62
SMIM27A0A1W2PRY6 SLC16A11-201ENST00000308009 1803 ntAPPRIS P2 TSL 1 (best) BASIC18.9■□□□□ 0.62
SMIM27A0A1W2PRY6 AARD-201ENST00000378279 2299 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
SMIM27A0A1W2PRY6 C14orf80-205ENST00000392523 1845 ntAPPRIS ALT2 TSL 1 (best) BASIC18.9■□□□□ 0.62
SMIM27A0A1W2PRY6 CCNG2-201ENST00000316355 5526 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
SMIM27A0A1W2PRY6 PCSK6-218ENST00000619160 3093 ntAPPRIS ALT2 TSL 1 (best) BASIC18.89■□□□□ 0.62
SMIM27A0A1W2PRY6 MEIS2-204ENST00000397620 2295 ntTSL 2 BASIC18.89■□□□□ 0.61
SMIM27A0A1W2PRY6 ENKD1-201ENST00000243878 1579 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
SMIM27A0A1W2PRY6 HOXA4-204ENST00000610970 1728 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
SMIM27A0A1W2PRY6 CCDC160-202ENST00000517294 1790 ntAPPRIS P1 TSL 5 BASIC18.88■□□□□ 0.61
SMIM27A0A1W2PRY6 GBX2-201ENST00000306318 2123 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
SMIM27A0A1W2PRY6 BTBD6-204ENST00000463376 2195 ntAPPRIS ALT2 TSL 2 BASIC18.88■□□□□ 0.61
SMIM27A0A1W2PRY6 AC006455.5-202ENST00000615248 2284 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
SMIM27A0A1W2PRY6 BBC3-204ENST00000449228 1827 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
SMIM27A0A1W2PRY6 FEZ2-204ENST00000405912 1931 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
SMIM27A0A1W2PRY6 RARA-203ENST00000394086 2008 ntTSL 2 BASIC18.88■□□□□ 0.61
SMIM27A0A1W2PRY6 SYT7-203ENST00000539008 2061 ntTSL 5 BASIC18.88■□□□□ 0.61
SMIM27A0A1W2PRY6 FBXL8-201ENST00000258200 1658 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
SMIM27A0A1W2PRY6 ECI1-201ENST00000301729 1541 ntAPPRIS P2 TSL 1 (best) BASIC18.87■□□□□ 0.61
SMIM27A0A1W2PRY6 RNF166-201ENST00000312838 1883 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
SMIM27A0A1W2PRY6 HMGB1-205ENST00000399494 1282 ntAPPRIS P1 TSL 2 BASIC18.87■□□□□ 0.61
SMIM27A0A1W2PRY6 KCNQ3-202ENST00000519445 2801 ntAPPRIS ALT2 TSL 5 BASIC18.87■□□□□ 0.61
SMIM27A0A1W2PRY6 PRR5-ARHGAP8-202ENST00000361473 2013 ntTSL 5 BASIC18.86■□□□□ 0.61
SMIM27A0A1W2PRY6 MISP3-202ENST00000587086 1535 ntAPPRIS P2 TSL 1 (best) BASIC18.86■□□□□ 0.61
SMIM27A0A1W2PRY6 PIK3R2-208ENST00000617642 1446 ntTSL 5 BASIC18.86■□□□□ 0.61
SMIM27A0A1W2PRY6 PABPN1-202ENST00000397276 2768 ntAPPRIS ALT1 TSL 1 (best) BASIC18.86■□□□□ 0.61
SMIM27A0A1W2PRY6 SRR-201ENST00000344595 2728 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
SMIM27A0A1W2PRY6 AC005524.1-203ENST00000586528 451 ntTSL 3 BASIC18.86■□□□□ 0.61
SMIM27A0A1W2PRY6 IRX4-202ENST00000505790 2538 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
SMIM27A0A1W2PRY6 RARA-202ENST00000394081 2285 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
Retrieved 100 of 98,524 protein–RNA pairs in 32.8 ms