Protein–RNA interactions for Protein: A0A0B4J246

TRAV8-4, T-cell receptor alpha variable 8-4 (Fragment), humanhuman

Predictions only

Length 113 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV8-4A0A0B4J246 TNFSF12-201ENST00000293825 1553 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
TRAV8-4A0A0B4J246 AC142086.6-201ENST00000621154 1765 ntBASIC17.48■□□□□ 0.39
TRAV8-4A0A0B4J246 PANK1-201ENST00000307534 6976 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
TRAV8-4A0A0B4J246 SHARPIN-202ENST00000398712 1765 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
TRAV8-4A0A0B4J246 ROM1-201ENST00000278833 1878 ntAPPRIS P2 TSL 1 (best) BASIC17.48■□□□□ 0.39
TRAV8-4A0A0B4J246 SPATA5L1-208ENST00000638607 1863 ntTSL 2 BASIC17.48■□□□□ 0.39
TRAV8-4A0A0B4J246 COL13A1-214ENST00000522165 2061 ntAPPRIS ALT2 TSL 5 BASIC17.48■□□□□ 0.39
TRAV8-4A0A0B4J246 MARCH11-201ENST00000332432 1741 ntAPPRIS P1 TSL 5 BASIC17.47■□□□□ 0.39
TRAV8-4A0A0B4J246 COL13A1-213ENST00000520267 2276 ntAPPRIS ALT2 TSL 5 BASIC17.47■□□□□ 0.39
TRAV8-4A0A0B4J246 PLSCR3-209ENST00000574401 2032 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
TRAV8-4A0A0B4J246 MISP3-202ENST00000587086 1535 ntAPPRIS P2 TSL 1 (best) BASIC17.47■□□□□ 0.39
TRAV8-4A0A0B4J246 CADPS-202ENST00000357948 5190 ntAPPRIS ALT2 TSL 1 (best) BASIC17.46■□□□□ 0.39
TRAV8-4A0A0B4J246 BIN1-210ENST00000393041 2272 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
TRAV8-4A0A0B4J246 FAM185A-202ENST00000413034 1179 ntAPPRIS P4 TSL 5 BASIC17.45■□□□□ 0.38
TRAV8-4A0A0B4J246 MIR3665-201ENST00000578708 105 ntBASIC17.45■□□□□ 0.38
TRAV8-4A0A0B4J246 TXNL4A-210ENST00000591711 669 ntTSL 2 BASIC17.45■□□□□ 0.38
TRAV8-4A0A0B4J246 ST6GALNAC6-204ENST00000373144 2406 ntAPPRIS ALT1 TSL 1 (best) BASIC17.45■□□□□ 0.38
TRAV8-4A0A0B4J246 OTUD5-201ENST00000156084 2740 ntAPPRIS P3 TSL 1 (best) BASIC17.44■□□□□ 0.38
TRAV8-4A0A0B4J246 TNFRSF25-204ENST00000356876 1625 ntAPPRIS ALT2 TSL 1 (best) BASIC17.44■□□□□ 0.38
TRAV8-4A0A0B4J246 PSMG4-202ENST00000380305 489 ntTSL 5 BASIC17.44■□□□□ 0.38
TRAV8-4A0A0B4J246 AP006261.1-201ENST00000584783 668 ntBASIC17.44■□□□□ 0.38
TRAV8-4A0A0B4J246 BCL11B-203ENST00000443726 2599 ntAPPRIS ALT2 TSL 5 BASIC17.44■□□□□ 0.38
TRAV8-4A0A0B4J246 ARMC10-208ENST00000441711 2524 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
TRAV8-4A0A0B4J246 EBAG9-202ENST00000395785 1467 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
TRAV8-4A0A0B4J246 MFSD12-202ENST00000389395 2039 ntAPPRIS ALT2 TSL 1 (best) BASIC17.43■□□□□ 0.38
TRAV8-4A0A0B4J246 MRAP2-201ENST00000257776 2153 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
TRAV8-4A0A0B4J246 ATP9A-202ENST00000338821 8106 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
TRAV8-4A0A0B4J246 PPP1R14B-201ENST00000309318 982 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
TRAV8-4A0A0B4J246 PGAM5-201ENST00000317555 1182 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
TRAV8-4A0A0B4J246 AC108673.1-201ENST00000510422 1159 ntBASIC17.43■□□□□ 0.38
TRAV8-4A0A0B4J246 TERF2-207ENST00000567296 1129 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
TRAV8-4A0A0B4J246 DDX42-201ENST00000359353 2783 ntTSL 5 BASIC17.43■□□□□ 0.38
TRAV8-4A0A0B4J246 TSEN34-203ENST00000396388 1349 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
TRAV8-4A0A0B4J246 PKM-203ENST00000389093 2279 ntTSL 5 BASIC17.42■□□□□ 0.38
TRAV8-4A0A0B4J246 AC127502.1-201ENST00000399971 1502 ntBASIC17.42■□□□□ 0.38
TRAV8-4A0A0B4J246 MAPKAPK2-201ENST00000294981 2171 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
TRAV8-4A0A0B4J246 ADAP1-201ENST00000265846 2363 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
TRAV8-4A0A0B4J246 NKIRAS2-202ENST00000316082 833 ntTSL 5 BASIC17.42■□□□□ 0.38
TRAV8-4A0A0B4J246 EMID1-203ENST00000404820 2118 ntTSL 5 BASIC17.42■□□□□ 0.38
TRAV8-4A0A0B4J246 KHSRP-201ENST00000398148 2993 ntAPPRIS P2 TSL 1 (best) BASIC17.42■□□□□ 0.38
TRAV8-4A0A0B4J246 TOMM40-201ENST00000252487 1707 ntAPPRIS P2 TSL 1 (best) BASIC17.41■□□□□ 0.38
TRAV8-4A0A0B4J246 TOMM40-202ENST00000405636 1709 ntAPPRIS P2 TSL 1 (best) BASIC17.41■□□□□ 0.38
TRAV8-4A0A0B4J246 S100A10-202ENST00000368811 1202 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
TRAV8-4A0A0B4J246 ECI1-203ENST00000562238 948 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
TRAV8-4A0A0B4J246 UBE2S-203ENST00000589978 496 ntTSL 5 BASIC17.41■□□□□ 0.38
TRAV8-4A0A0B4J246 ARPP19-201ENST00000249822 5301 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
TRAV8-4A0A0B4J246 MORF4L1-203ENST00000426013 1880 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
TRAV8-4A0A0B4J246 DPF1-202ENST00000412732 2303 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
TRAV8-4A0A0B4J246 GTF3C4-202ENST00000483873 1417 ntTSL 3 BASIC17.4■□□□□ 0.38
TRAV8-4A0A0B4J246 CGGBP1-206ENST00000482016 1147 ntAPPRIS P1 TSL 2 BASIC17.4■□□□□ 0.38
TRAV8-4A0A0B4J246 ETS1-201ENST00000319397 2231 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
TRAV8-4A0A0B4J246 D2HGDH-203ENST00000403782 2208 ntTSL 2 BASIC17.4■□□□□ 0.38
TRAV8-4A0A0B4J246 COQ2-202ENST00000311469 1641 ntAPPRIS P2 TSL 1 (best) BASIC17.39■□□□□ 0.38
TRAV8-4A0A0B4J246 RCC1L-205ENST00000618035 1409 ntTSL 1 (best) BASIC17.39■□□□□ 0.38
TRAV8-4A0A0B4J246 ARHGAP5-203ENST00000396582 5786 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
TRAV8-4A0A0B4J246 SIN3B-209ENST00000596802 2556 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
TRAV8-4A0A0B4J246 HDGF-210ENST00000537739 2073 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
TRAV8-4A0A0B4J246 PRELID2-207ENST00000511435 1894 ntAPPRIS ALT1 TSL 2 BASIC17.39■□□□□ 0.37
TRAV8-4A0A0B4J246 C1QTNF8-201ENST00000328449 1627 ntAPPRIS P1 TSL 5 BASIC17.39■□□□□ 0.37
TRAV8-4A0A0B4J246 AP002884.3-203ENST00000419895 1711 ntTSL 2 BASIC17.38■□□□□ 0.37
TRAV8-4A0A0B4J246 F8A3-201ENST00000622749 1759 ntAPPRIS P1 BASIC17.38■□□□□ 0.37
TRAV8-4A0A0B4J246 WTAP-206ENST00000621533 2109 ntAPPRIS P1 TSL 2 BASIC17.38■□□□□ 0.37
TRAV8-4A0A0B4J246 PPP1CC-208ENST00000551676 1581 ntTSL 2 BASIC17.38■□□□□ 0.37
TRAV8-4A0A0B4J246 TCEA2-202ENST00000343484 1235 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
TRAV8-4A0A0B4J246 MSANTD2-203ENST00000524950 1109 ntTSL 2 BASIC17.38■□□□□ 0.37
TRAV8-4A0A0B4J246 C14orf80-202ENST00000334656 1358 ntAPPRIS ALT2 TSL 2 BASIC17.38■□□□□ 0.37
TRAV8-4A0A0B4J246 BARX1-201ENST00000253968 1533 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
TRAV8-4A0A0B4J246 NEURL4-202ENST00000399464 5200 ntAPPRIS P4 TSL 1 (best) BASIC17.37■□□□□ 0.37
TRAV8-4A0A0B4J246 MAD2L2-205ENST00000376669 864 ntTSL 3 BASIC17.37■□□□□ 0.37
TRAV8-4A0A0B4J246 RASSF5-204ENST00000580449 1932 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
TRAV8-4A0A0B4J246 MYBL1-204ENST00000522677 5192 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
TRAV8-4A0A0B4J246 OTUD5-202ENST00000376488 2692 ntAPPRIS ALT1 TSL 1 (best) BASIC17.36■□□□□ 0.37
TRAV8-4A0A0B4J246 SPTSSA-201ENST00000298130 2777 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
TRAV8-4A0A0B4J246 SLC35A1-203ENST00000369557 1653 ntTSL 2 BASIC17.36■□□□□ 0.37
TRAV8-4A0A0B4J246 PURG-202ENST00000475541 2875 ntAPPRIS P1 BASIC17.36■□□□□ 0.37
TRAV8-4A0A0B4J246 FRAT2-201ENST00000371019 2213 ntAPPRIS P1 BASIC17.36■□□□□ 0.37
TRAV8-4A0A0B4J246 PLBD2-202ENST00000545182 2321 ntTSL 2 BASIC17.36■□□□□ 0.37
TRAV8-4A0A0B4J246 KLC2-205ENST00000394078 1557 ntTSL 5 BASIC17.36■□□□□ 0.37
TRAV8-4A0A0B4J246 ZFAND2B-208ENST00000409594 2021 ntTSL 2 BASIC17.35■□□□□ 0.37
TRAV8-4A0A0B4J246 ANKS6-201ENST00000353234 7164 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
TRAV8-4A0A0B4J246 THAP11-201ENST00000303596 2114 ntAPPRIS P1 BASIC17.35■□□□□ 0.37
TRAV8-4A0A0B4J246 DUX4L28-201ENST00000623687 678 ntBASIC17.35■□□□□ 0.37
TRAV8-4A0A0B4J246 SH3D19-211ENST00000604030 5228 ntTSL 5 BASIC17.35■□□□□ 0.37
TRAV8-4A0A0B4J246 VEGFC-202ENST00000618562 2064 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
TRAV8-4A0A0B4J246 CLK2-201ENST00000355560 2120 ntAPPRIS ALT1 TSL 5 BASIC17.35■□□□□ 0.37
TRAV8-4A0A0B4J246 KLF15-201ENST00000296233 2574 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
TRAV8-4A0A0B4J246 ACTR3B-201ENST00000256001 2216 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
TRAV8-4A0A0B4J246 ARMC10-202ENST00000323716 2635 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
TRAV8-4A0A0B4J246 MTCH1-201ENST00000373616 2006 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
TRAV8-4A0A0B4J246 EI24-212ENST00000615917 1407 ntTSL 2 BASIC17.34■□□□□ 0.37
TRAV8-4A0A0B4J246 AL121749.1-202ENST00000609313 2153 ntBASIC17.33■□□□□ 0.37
TRAV8-4A0A0B4J246 DLK2-201ENST00000357338 2038 ntAPPRIS P3 TSL 2 BASIC17.33■□□□□ 0.37
TRAV8-4A0A0B4J246 LACTB-201ENST00000261893 1972 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
TRAV8-4A0A0B4J246 COMMD7-201ENST00000278980 1900 ntAPPRIS P3 TSL 1 (best) BASIC17.33■□□□□ 0.37
TRAV8-4A0A0B4J246 SLC16A11-201ENST00000308009 1803 ntAPPRIS P2 TSL 1 (best) BASIC17.33■□□□□ 0.37
TRAV8-4A0A0B4J246 CACNG6-202ENST00000346968 645 ntTSL 5 BASIC17.33■□□□□ 0.36
TRAV8-4A0A0B4J246 CCKBR-201ENST00000334619 2121 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
TRAV8-4A0A0B4J246 FHL2-202ENST00000344213 1769 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
TRAV8-4A0A0B4J246 DEDD-212ENST00000545495 2329 ntAPPRIS P1 TSL 3 BASIC17.32■□□□□ 0.36
TRAV8-4A0A0B4J246 TSKU-201ENST00000333090 2712 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Retrieved 100 of 98,524 protein–RNA pairs in 14.4 ms