Protein–RNA interactions for Protein: A0A0A0MS02

TRGV1, T-cell receptor gamma variable 1 (non-functional) (Fragment), humanhuman

Predictions only

Length 117 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRGV1A0A0A0MS02 MON1A-202ENST00000417270 2527 ntAPPRIS ALT2 TSL 5 BASIC13.94□□□□□ -0.18
TRGV1A0A0A0MS02 TMEM65-201ENST00000297632 9029 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
TRGV1A0A0A0MS02 MAP4K4-205ENST00000350878 7640 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
TRGV1A0A0A0MS02 POMC-201ENST00000264708 1074 ntAPPRIS P1 TSL 2 BASIC13.94□□□□□ -0.18
TRGV1A0A0A0MS02 WDR74-202ENST00000311713 1153 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
TRGV1A0A0A0MS02 FBLN7-202ENST00000331203 2301 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
TRGV1A0A0A0MS02 ANXA2-201ENST00000332680 1444 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
TRGV1A0A0A0MS02 PFN3-201ENST00000358571 530 ntAPPRIS P1 BASIC13.94□□□□□ -0.18
TRGV1A0A0A0MS02 ZDHHC12-202ENST00000372667 1187 ntTSL 5 BASIC13.94□□□□□ -0.18
TRGV1A0A0A0MS02 UHRF2-202ENST00000381373 802 ntTSL 3 BASIC13.94□□□□□ -0.18
TRGV1A0A0A0MS02 LINC02531-201ENST00000404689 593 ntTSL 5 BASIC13.94□□□□□ -0.18
TRGV1A0A0A0MS02 NAA60-204ENST00000421765 1045 ntTSL 2 BASIC13.94□□□□□ -0.18
TRGV1A0A0A0MS02 LY6E-202ENST00000429120 1173 ntAPPRIS P2 TSL 1 (best) BASIC13.94□□□□□ -0.18
TRGV1A0A0A0MS02 ZNF815P-204ENST00000434898 1737 ntBASIC13.94□□□□□ -0.18
TRGV1A0A0A0MS02 HOXB-AS3-204ENST00000466037 522 ntTSL 3 BASIC13.94□□□□□ -0.18
TRGV1A0A0A0MS02 WDR41-208ENST00000507029 1553 ntTSL 2 BASIC13.94□□□□□ -0.18
TRGV1A0A0A0MS02 YTHDC2-207ENST00000515883 2629 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
TRGV1A0A0A0MS02 AC016065.1-203ENST00000523225 1017 ntTSL 3 BASIC13.94□□□□□ -0.18
TRGV1A0A0A0MS02 SAAL1-202ENST00000524803 1582 ntAPPRIS P2 TSL 1 (best) BASIC13.94□□□□□ -0.18
TRGV1A0A0A0MS02 AC027451.1-201ENST00000530667 553 ntTSL 4 BASIC13.94□□□□□ -0.18
TRGV1A0A0A0MS02 CAPN5-206ENST00000531028 534 ntTSL 5 BASIC13.94□□□□□ -0.18
TRGV1A0A0A0MS02 CAPN1-226ENST00000533820 3083 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
TRGV1A0A0A0MS02 MAZ-215ENST00000569978 567 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
TRGV1A0A0A0MS02 DDX42-216ENST00000583590 4148 ntAPPRIS P1 TSL 5 BASIC13.94□□□□□ -0.18
TRGV1A0A0A0MS02 ELAC1-203ENST00000588577 694 ntTSL 2 BASIC13.94□□□□□ -0.18
TRGV1A0A0A0MS02 SPHK1-207ENST00000590959 1851 ntAPPRIS ALT2 TSL 1 (best) BASIC13.94□□□□□ -0.18
TRGV1A0A0A0MS02 SYNGR4-202ENST00000595322 533 ntTSL 3 BASIC13.94□□□□□ -0.18
TRGV1A0A0A0MS02 C17orf50-201ENST00000603305 569 ntTSL 3 BASIC13.94□□□□□ -0.18
TRGV1A0A0A0MS02 SMAGP-206ENST00000604188 433 ntTSL 3 BASIC13.94□□□□□ -0.18
TRGV1A0A0A0MS02 C17orf50-203ENST00000605587 1018 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
TRGV1A0A0A0MS02 GTF2IRD2B-206ENST00000614064 573 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
TRGV1A0A0A0MS02 STMN3-201ENST00000370053 2255 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
TRGV1A0A0A0MS02 ZNF582-207ENST00000619584 2297 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
TRGV1A0A0A0MS02 CDK5R1-201ENST00000313401 4325 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
TRGV1A0A0A0MS02 PYCR1-204ENST00000403172 1811 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
TRGV1A0A0A0MS02 EPHX1-201ENST00000272167 1660 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
TRGV1A0A0A0MS02 B4GALT1-202ENST00000535206 1535 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
TRGV1A0A0A0MS02 CASKIN2-201ENST00000321617 5015 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
TRGV1A0A0A0MS02 FAM83A-205ENST00000522648 1604 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
TRGV1A0A0A0MS02 PDLIM2-205ENST00000397761 1491 ntAPPRIS P1 TSL 5 BASIC13.93□□□□□ -0.18
TRGV1A0A0A0MS02 PCGF3-201ENST00000362003 5685 ntAPPRIS P1 TSL 5 BASIC13.93□□□□□ -0.18
TRGV1A0A0A0MS02 ETFA-202ENST00000433983 1346 ntTSL 2 BASIC13.93□□□□□ -0.18
TRGV1A0A0A0MS02 PRR7-202ENST00000502922 1345 ntAPPRIS P1 TSL 2 BASIC13.93□□□□□ -0.18
TRGV1A0A0A0MS02 ARRB2-216ENST00000574954 1348 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
TRGV1A0A0A0MS02 CDKN2B-AS1-217ENST00000585267 1337 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
TRGV1A0A0A0MS02 AC008073.3-201ENST00000610442 2281 ntAPPRIS P1 TSL 2 BASIC13.93□□□□□ -0.18
TRGV1A0A0A0MS02 WWOX-202ENST00000402655 1594 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
TRGV1A0A0A0MS02 CCNO-201ENST00000282572 1433 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
TRGV1A0A0A0MS02 LRP8-204ENST00000371454 3322 ntAPPRIS ALT2 TSL 1 (best) BASIC13.93□□□□□ -0.18
TRGV1A0A0A0MS02 ASB18-201ENST00000409749 1401 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
TRGV1A0A0A0MS02 BACE1-204ENST00000445823 1408 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
TRGV1A0A0A0MS02 CAMKK1-202ENST00000348335 3563 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
TRGV1A0A0A0MS02 AURKA-202ENST00000347343 2248 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
TRGV1A0A0A0MS02 MT3-201ENST00000200691 569 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
TRGV1A0A0A0MS02 PARL-201ENST00000311101 1240 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
TRGV1A0A0A0MS02 MRPS24-201ENST00000317534 707 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
TRGV1A0A0A0MS02 MRPL12-201ENST00000333676 1028 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
TRGV1A0A0A0MS02 ESRRAP1-201ENST00000400596 1257 ntBASIC13.93□□□□□ -0.18
TRGV1A0A0A0MS02 ZNF529-AS1-202ENST00000475219 1033 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
TRGV1A0A0A0MS02 AC035140.1-201ENST00000507957 493 ntTSL 3 BASIC13.93□□□□□ -0.18
TRGV1A0A0A0MS02 CA3-AS1-201ENST00000517697 559 ntTSL 4 BASIC13.93□□□□□ -0.18
TRGV1A0A0A0MS02 MIR381HG-201ENST00000553692 425 ntTSL 3 BASIC13.93□□□□□ -0.18
TRGV1A0A0A0MS02 LINC00654-202ENST00000589201 579 ntTSL 3 BASIC13.93□□□□□ -0.18
TRGV1A0A0A0MS02 AC008403.3-201ENST00000598924 454 ntBASIC13.93□□□□□ -0.18
TRGV1A0A0A0MS02 AC069544.1-201ENST00000609399 999 ntBASIC13.93□□□□□ -0.18
TRGV1A0A0A0MS02 CHMP6-201ENST00000325167 1664 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
TRGV1A0A0A0MS02 BRAF-201ENST00000288602 2480 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
TRGV1A0A0A0MS02 FAM109B-201ENST00000321753 2335 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
TRGV1A0A0A0MS02 VAV2-203ENST00000406606 4691 ntAPPRIS P2 TSL 1 (best) BASIC13.93□□□□□ -0.18
TRGV1A0A0A0MS02 TAL1-201ENST00000294339 5001 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
TRGV1A0A0A0MS02 TMEM259-209ENST00000592590 2509 ntTSL 5 BASIC13.93□□□□□ -0.18
TRGV1A0A0A0MS02 MARCH1-203ENST00000503008 5877 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
TRGV1A0A0A0MS02 PLA2G12A-201ENST00000243501 5226 ntAPPRIS P2 TSL 1 (best) BASIC13.93□□□□□ -0.18
TRGV1A0A0A0MS02 NBPF21P-201ENST00000425093 1451 ntBASIC13.93□□□□□ -0.18
TRGV1A0A0A0MS02 ILDR2-203ENST00000469934 1950 ntAPPRIS ALT2 TSL 5 BASIC13.92□□□□□ -0.18
TRGV1A0A0A0MS02 DNAJC11-201ENST00000294401 2210 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
TRGV1A0A0A0MS02 DMRT2-201ENST00000259622 2459 ntTSL 2 BASIC13.92□□□□□ -0.18
TRGV1A0A0A0MS02 PSKH2-201ENST00000276616 1322 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
TRGV1A0A0A0MS02 AMACR-206ENST00000502637 1598 ntTSL 5 BASIC13.92□□□□□ -0.18
TRGV1A0A0A0MS02 SNAP91-201ENST00000195649 4434 ntAPPRIS ALT2 TSL 5 BASIC13.92□□□□□ -0.18
TRGV1A0A0A0MS02 SNAP91-204ENST00000369694 4449 ntAPPRIS P2 TSL 5 BASIC13.92□□□□□ -0.18
TRGV1A0A0A0MS02 CYGB-201ENST00000293230 2158 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
TRGV1A0A0A0MS02 PCMT1-203ENST00000367384 1938 ntAPPRIS ALT2 TSL 1 (best) BASIC13.92□□□□□ -0.18
TRGV1A0A0A0MS02 CD8B-203ENST00000390655 1417 ntAPPRIS P2 TSL 1 (best) BASIC13.92□□□□□ -0.18
TRGV1A0A0A0MS02 CAPN12-201ENST00000328867 2762 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
TRGV1A0A0A0MS02 RHOU-201ENST00000366691 4372 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
TRGV1A0A0A0MS02 DENND2A-201ENST00000275884 3735 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
TRGV1A0A0A0MS02 NIPAL2-201ENST00000341166 4581 ntTSL 2 BASIC13.92□□□□□ -0.18
TRGV1A0A0A0MS02 MATN4-202ENST00000360607 2127 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
TRGV1A0A0A0MS02 IFI6-203ENST00000362020 828 ntAPPRIS ALT2 TSL 1 (best) BASIC13.92□□□□□ -0.18
TRGV1A0A0A0MS02 GTF2A2-203ENST00000396061 758 ntAPPRIS P1 TSL 2 BASIC13.92□□□□□ -0.18
TRGV1A0A0A0MS02 EP300-AS1-201ENST00000420537 457 ntTSL 3 BASIC13.92□□□□□ -0.18
TRGV1A0A0A0MS02 LINC00708-201ENST00000428165 916 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
TRGV1A0A0A0MS02 LINC00894-209ENST00000458274 547 ntTSL 2 BASIC13.92□□□□□ -0.18
TRGV1A0A0A0MS02 KRT18P16-201ENST00000510337 1294 ntBASIC13.92□□□□□ -0.18
TRGV1A0A0A0MS02 MMAB-206ENST00000540016 945 ntTSL 3 BASIC13.92□□□□□ -0.18
TRGV1A0A0A0MS02 NOXO1-205ENST00000566005 1144 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
TRGV1A0A0A0MS02 FXYD1-204ENST00000588081 645 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
TRGV1A0A0A0MS02 PSMC3IP-208ENST00000590760 664 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
TRGV1A0A0A0MS02 JOSD2-202ENST00000595669 733 ntTSL 2 BASIC13.92□□□□□ -0.18
Retrieved 100 of 98,524 protein–RNA pairs in 31 ms