RNA–Protein interactions for RNA: ENST00000321617.7

CASKIN2-201, Transcript of CASK interacting protein 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CASKIN2, Length 5,015 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASKIN2-201ENST00000321617 NISCHQ9Y2I1 1504 aa29.98■■■□□ 2.39
CASKIN2-201ENST00000321617 DCAF8L2P0C7V8 631 aa29.86■■■□□ 2.37
CASKIN2-201ENST00000321617 SUPT5HO00267 1087 aaKnown RBP29.52■■■□□ 2.32
CASKIN2-201ENST00000321617 SHROOM4Q9ULL8 1493 aa28.96■■■□□ 2.23
CASKIN2-201ENST00000321617 PCGF6Q9BYE7 350 aa28.39■■■□□ 2.14
CASKIN2-201ENST00000321617 EHMT2Q96KQ7 1210 aa28.2■■■□□ 2.11
CASKIN2-201ENST00000321617 PELP1Q8IZL8 1130 aaKnown RBP27.76■■■□□ 2.03
CASKIN2-201ENST00000321617 FAM9AQ8IZU1 332 aaPredicted RBP27.72■■■□□ 2.03
CASKIN2-201ENST00000321617 ZEB1P37275 1124 aaPredicted RBP27.65■■■□□ 2.02
CASKIN2-201ENST00000321617 HRCP23327 699 aa27.56■■■□□ 2
CASKIN2-201ENST00000321617 CENPBP07199 599 aaPredicted RBP27.49■■□□□ 1.99
CASKIN2-201ENST00000321617 TTBK1Q5TCY1 1321 aaPredicted RBP27.37■■□□□ 1.97
CASKIN2-201ENST00000321617 CCER1Q8TC90 406 aaPredicted RBP27.31■■□□□ 1.96
CASKIN2-201ENST00000321617 APLP2Q06481 763 aa27.29■■□□□ 1.96
CASKIN2-201ENST00000321617 TRIM41Q8WV44 630 aa27.25■■□□□ 1.95
CASKIN2-201ENST00000321617 TRIM26Q12899 539 aaPredicted RBP27.14■■□□□ 1.94
CASKIN2-201ENST00000321617 MYT1Q01538 1121 aa27.08■■□□□ 1.93
CASKIN2-201ENST00000321617 PPARGC1BQ86YN6 1023 aaKnown RBP27.04■■□□□ 1.92
CASKIN2-201ENST00000321617 CHIC1Q5VXU3 224 aa27.01■■□□□ 1.91
CASKIN2-201ENST00000321617 LOC105371045A0A1W2PR82 267 aa26.91■■□□□ 1.9
CASKIN2-201ENST00000321617 YTHDC1Q96MU7 727 aaKnown RBP26.89■■□□□ 1.89
CASKIN2-201ENST00000321617 RANGAP1P46060 587 aaPredicted RBP26.66■■□□□ 1.86
CASKIN2-201ENST00000321617 UBTFP17480 764 aaKnown RBP26.64■■□□□ 1.86
CASKIN2-201ENST00000321617 ERICH6Q7L0X2 663 aa26.61■■□□□ 1.85
CASKIN2-201ENST00000321617 NEFLP07196 543 aa26.4■■□□□ 1.82
CASKIN2-201ENST00000321617 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP26.27■■□□□ 1.8
CASKIN2-201ENST00000321617 DIEXFQ68CQ4 756 aaKnown RBP26.26■■□□□ 1.79
CASKIN2-201ENST00000321617 ATP1B4Q9UN42 357 aaPredicted RBP26.12■■□□□ 1.77
CASKIN2-201ENST00000321617 HNRNPUL2Q1KMD3 747 aaKnown RBP26.08■■□□□ 1.77
CASKIN2-201ENST00000321617 GTF3C3Q9Y5Q9 886 aa26.07■■□□□ 1.76
CASKIN2-201ENST00000321617 ITGAEP38570 1179 aa25.85■■□□□ 1.73
CASKIN2-201ENST00000321617 ACIN1Q9UKV3 1341 aaKnown RBP25.84■■□□□ 1.73
CASKIN2-201ENST00000321617 ZNF316A6NFI3 1004 aaPredicted RBP25.61■■□□□ 1.69
CASKIN2-201ENST00000321617 DCAF1Q9Y4B6 1507 aa25.54■■□□□ 1.68
CASKIN2-201ENST00000321617 SCAF1Q9H7N4 1312 aaKnown RBP25.47■■□□□ 1.67
CASKIN2-201ENST00000321617 BCANQ96GW7 911 aa25.45■■□□□ 1.67
CASKIN2-201ENST00000321617 NEUROD1Q13562 356 aa25.39■■□□□ 1.66
CASKIN2-201ENST00000321617 POLR3GLQ9BT43 218 aa25.34■■□□□ 1.65
CASKIN2-201ENST00000321617 CNGB1Q14028 1251 aaPredicted RBP25.29■■□□□ 1.64
CASKIN2-201ENST00000321617 DAXXQ9UER7 740 aaPredicted RBP25.29■■□□□ 1.64
CASKIN2-201ENST00000321617 MYO15BQ96JP2 1530 aa25.23■■□□□ 1.63
CASKIN2-201ENST00000321617 RTL5Q5HYW3 569 aaPredicted RBP25.21■■□□□ 1.63
CASKIN2-201ENST00000321617 FAM50AQ14320 339 aaKnown RBP25.13■■□□□ 1.61
CASKIN2-201ENST00000321617 ANP32CO43423 234 aa25.1■■□□□ 1.61
CASKIN2-201ENST00000321617 CDK11AQ9UQ88 783 aaPredicted RBP25.08■■□□□ 1.6
CASKIN2-201ENST00000321617 CSRNP3Q8WYN3 585 aa25.06■■□□□ 1.6
CASKIN2-201ENST00000321617 CLSPNQ9HAW4 1339 aa24.99■■□□□ 1.59
CASKIN2-201ENST00000321617 ZCCHC6Q5VYS8 1495 aaKnown RBP24.99■■□□□ 1.59
CASKIN2-201ENST00000321617 MIER1Q8N108 512 aa24.89■■□□□ 1.57
CASKIN2-201ENST00000321617 FKBP8Q14318 412 aa24.89■■□□□ 1.57
CASKIN2-201ENST00000321617 TRIM52Q96A61 297 aa24.83■■□□□ 1.57
CASKIN2-201ENST00000321617 ABCC9O60706 1549 aa24.72■■□□□ 1.55
CASKIN2-201ENST00000321617 PABPN1Q86U42 306 aaKnown RBP eCLIP24.72■■□□□ 1.55
CASKIN2-201ENST00000321617 CCDC180Q9P1Z9 1646 aa24.69■■□□□ 1.54
CASKIN2-201ENST00000321617 DDX10Q13206 875 aaKnown RBP24.68■■□□□ 1.54
CASKIN2-201ENST00000321617 ANP32AP39687 249 aaKnown RBP24.58■■□□□ 1.53
CASKIN2-201ENST00000321617 ZNF326Q5BKZ1 582 aaKnown RBP24.57■■□□□ 1.52
CASKIN2-201ENST00000321617 HNRNPUQ00839 825 aaKnown RBP eCLIP24.56■■□□□ 1.52
CASKIN2-201ENST00000321617 P3H3Q8IVL6 736 aa24.5■■□□□ 1.51
CASKIN2-201ENST00000321617 MYT1LQ9UL68 1186 aa24.46■■□□□ 1.51
CASKIN2-201ENST00000321617 SCRIBQ14160 1630 aa24.44■■□□□ 1.5
CASKIN2-201ENST00000321617 NPM2Q86SE8 214 aaKnown RBP24.41■■□□□ 1.5
CASKIN2-201ENST00000321617 TONSLQ96HA7 1378 aa24.41■■□□□ 1.5
CASKIN2-201ENST00000321617 ANP32EQ9BTT0 268 aa24.4■■□□□ 1.5
CASKIN2-201ENST00000321617 SLC4A1APQ9BWU0 796 aaKnown RBP24.38■■□□□ 1.49
CASKIN2-201ENST00000321617 FAM9BQ8IZU0 186 aa24.35■■□□□ 1.49
CASKIN2-201ENST00000321617 RSF1Q96T23 1441 aaPredicted RBP24.33■■□□□ 1.49
CASKIN2-201ENST00000321617 CEP162Q5TB80 1403 aa24.32■■□□□ 1.48
CASKIN2-201ENST00000321617 NBR1Q14596 966 aa24.29■■□□□ 1.48
CASKIN2-201ENST00000321617 IRX6P78412 446 aaPredicted RBP24.29■■□□□ 1.48
CASKIN2-201ENST00000321617 HIRIP3Q9BW71 556 aaPredicted RBP24.29■■□□□ 1.48
CASKIN2-201ENST00000321617 CLIP1P30622 1438 aa24.27■■□□□ 1.48
CASKIN2-201ENST00000321617 EIF5BO60841 1220 aaKnown RBP24.22■■□□□ 1.47
CASKIN2-201ENST00000321617 SUPT16HQ9Y5B9 1047 aaKnown RBP24.22■■□□□ 1.47
CASKIN2-201ENST00000321617 CCDC136Q96JN2 1154 aa24.21■■□□□ 1.47
CASKIN2-201ENST00000321617 ZBTB47Q9UFB7 747 aaPredicted RBP24.2■■□□□ 1.46
CASKIN2-201ENST00000321617 ARID3CA6NKF2 412 aa24.15■■□□□ 1.46
CASKIN2-201ENST00000321617 MRS2Q9HD23 443 aa24.14■■□□□ 1.45
CASKIN2-201ENST00000321617 TNIKQ9UKE5 1360 aa24.11■■□□□ 1.45
CASKIN2-201ENST00000321617 CANXP27824 592 aaKnown RBP24.1■■□□□ 1.45
CASKIN2-201ENST00000321617 EEA1Q15075 1411 aa24.09■■□□□ 1.45
CASKIN2-201ENST00000321617 GOLGA3Q08378 1498 aa24.07■■□□□ 1.44
CASKIN2-201ENST00000321617 SALL2Q9Y467 1007 aaPredicted RBP24.06■■□□□ 1.44
CASKIN2-201ENST00000321617 TMC1Q8TDI8 760 aa24.02■■□□□ 1.44
CASKIN2-201ENST00000321617 CHIC2Q9UKJ5 165 aa23.99■■□□□ 1.43
CASKIN2-201ENST00000321617 ZNF777Q9ULD5 760 aaPredicted RBP23.95■■□□□ 1.43
CASKIN2-201ENST00000321617 EIF4G2P78344 907 aaKnown RBP eCLIP23.93■■□□□ 1.42
CASKIN2-201ENST00000321617 BCL11AQ9H165 835 aa23.9■■□□□ 1.42
CASKIN2-201ENST00000321617 SIN3AQ96ST3 1273 aa23.84■■□□□ 1.41
CASKIN2-201ENST00000321617 RBM19Q9Y4C8 960 aaKnown RBP23.83■■□□□ 1.41
CASKIN2-201ENST00000321617 RB1CC1Q8TDY2 1594 aa23.83■■□□□ 1.41
CASKIN2-201ENST00000321617 WRNQ14191 1432 aaPredicted RBP eCLIP23.82■■□□□ 1.4
CASKIN2-201ENST00000321617 FBLN2P98095 1184 aa23.81■■□□□ 1.4
CASKIN2-201ENST00000321617 MTUS2Q5JR59 1369 aa23.81■■□□□ 1.4
CASKIN2-201ENST00000321617 PPP4R2Q9NY27 417 aa23.8■■□□□ 1.4
CASKIN2-201ENST00000321617 CEP164Q9UPV0 1460 aa23.8■■□□□ 1.4
CASKIN2-201ENST00000321617 UPF2Q9HAU5 1272 aaKnown RBP23.79■■□□□ 1.4
CASKIN2-201ENST00000321617 TSHZ2Q9NRE2 1034 aa23.78■■□□□ 1.4
CASKIN2-201ENST00000321617 RRP7BPQ9NSQ0 103 aa23.74■■□□□ 1.39
CASKIN2-201ENST00000321617 SENP3-EIF4A1A0A087X0R7 540 aa23.72■■□□□ 1.39
Retrieved 100 of 20,778 RNA–protein pairs in 12.3 ms