RNA–Protein interactions for RNA: ENST00000604188.1

SMAGP-206, Transcript of small cell adhesion glycoprotein, humanhuman

TSL 3 BASIC

Gene SMAGP, Length 433 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAGP-206ENST00000604188 NISCHQ9Y2I1 1504 aa46.8■■■■■ 5.08
SMAGP-206ENST00000604188 CCDC180Q9P1Z9 1646 aa41.3■■■■■ 4.2
SMAGP-206ENST00000604188 ABCC9O60706 1549 aa40.22■■■■■ 4.03
SMAGP-206ENST00000604188 DCAF8L2P0C7V8 631 aa39.12■■■■□ 3.85
SMAGP-206ENST00000604188 ZCCHC6Q5VYS8 1495 aaKnown RBP39.07■■■■□ 3.85
SMAGP-206ENST00000604188 NACADO15069 1562 aa38.78■■■■□ 3.8
SMAGP-206ENST00000604188 RB1CC1Q8TDY2 1594 aa38.74■■■■□ 3.79
SMAGP-206ENST00000604188 DCAF1Q9Y4B6 1507 aa38.65■■■■□ 3.78
SMAGP-206ENST00000604188 MYO15BQ96JP2 1530 aa38.63■■■■□ 3.77
SMAGP-206ENST00000604188 SCRIBQ14160 1630 aa37.89■■■■□ 3.66
SMAGP-206ENST00000604188 UNC13AQ9UPW8 1703 aa37.84■■■■□ 3.65
SMAGP-206ENST00000604188 PABPN1Q86U42 306 aaKnown RBP eCLIP37.73■■■■□ 3.63
SMAGP-206ENST00000604188 BICRAQ9NZM4 1560 aa37.59■■■■□ 3.61
SMAGP-206ENST00000604188 SHROOM4Q9ULL8 1493 aa37.43■■■■□ 3.58
SMAGP-206ENST00000604188 DNAJC5BQ9UF47 199 aa36.58■■■■□ 3.45
SMAGP-206ENST00000604188 EIF4G1Q04637 1599 aaKnown RBP36.56■■■■□ 3.44
SMAGP-206ENST00000604188 CECR2Q9BXF3 1484 aa36.5■■■■□ 3.43
SMAGP-206ENST00000604188 CC2D2AQ9P2K1 1620 aa36.32■■■■□ 3.4
SMAGP-206ENST00000604188 SMARCA4P51532 1647 aa36.21■■■■□ 3.39
SMAGP-206ENST00000604188 BAZ1AQ9NRL2 1556 aaPredicted RBP36.21■■■■□ 3.39
SMAGP-206ENST00000604188 MROH2BQ7Z745 1585 aa36.14■■■■□ 3.38
SMAGP-206ENST00000604188 ATAD2BQ9ULI0 1458 aa35.94■■■■□ 3.34
SMAGP-206ENST00000604188 RSF1Q96T23 1441 aaPredicted RBP35.87■■■■□ 3.33
SMAGP-206ENST00000604188 SMARCA2P51531 1590 aa35.86■■■■□ 3.33
SMAGP-206ENST00000604188 NCAPD3P42695 1498 aa35.82■■■■□ 3.32
SMAGP-206ENST00000604188 PEG3Q9GZU2 1588 aa35.78■■■■□ 3.32
SMAGP-206ENST00000604188 WIZO95785 1651 aa35.75■■■■□ 3.31
SMAGP-206ENST00000604188 BAZ1BQ9UIG0 1483 aaKnown RBP35.67■■■■□ 3.3
SMAGP-206ENST00000604188 HMGXB3Q12766 1538 aa35.65■■■■□ 3.3
SMAGP-206ENST00000604188 SUPT5HO00267 1087 aaKnown RBP35.42■■■■□ 3.26
SMAGP-206ENST00000604188 TOP2AP11388 1531 aaKnown RBP35.36■■■■□ 3.25
SMAGP-206ENST00000604188 CCDC88BA6NC98 1476 aa34.99■■■■□ 3.19
SMAGP-206ENST00000604188 NESP48681 1621 aa34.94■■■■□ 3.18
SMAGP-206ENST00000604188 CADPSQ9ULU8 1353 aa34.84■■■■□ 3.17
SMAGP-206ENST00000604188 LAMC3Q9Y6N6 1575 aa34.77■■■■□ 3.16
SMAGP-206ENST00000604188 CFTRP13569 1480 aa34.7■■■■□ 3.15
SMAGP-206ENST00000604188 ERCC6Q03468 1493 aa34.6■■■■□ 3.13
SMAGP-206ENST00000604188 PDS5BQ9NTI5 1447 aa34.57■■■■□ 3.13
SMAGP-206ENST00000604188 FANCD2Q9BXW9 1451 aa34.46■■■■□ 3.11
SMAGP-206ENST00000604188 KIF21AQ7Z4S6 1674 aa34.44■■■■□ 3.1
SMAGP-206ENST00000604188 CEP164Q9UPV0 1460 aa34.35■■■■□ 3.09
SMAGP-206ENST00000604188 PRDM2Q13029 1718 aa34.35■■■■□ 3.09
SMAGP-206ENST00000604188 MRC2Q9UBG0 1479 aa34.21■■■■□ 3.07
SMAGP-206ENST00000604188 THOC2Q8NI27 1593 aaKnown RBP34.21■■■■□ 3.07
SMAGP-206ENST00000604188 URB2Q14146 1524 aaKnown RBP34.09■■■■□ 3.05
SMAGP-206ENST00000604188 WDR62O43379 1518 aa34.04■■■■□ 3.04
SMAGP-206ENST00000604188 CUX2O14529 1486 aa34■■■■□ 3.03
SMAGP-206ENST00000604188 TOPBP1Q92547 1522 aa33.94■■■■□ 3.02
SMAGP-206ENST00000604188 DNMBPQ6XZF7 1577 aa33.9■■■■□ 3.02
SMAGP-206ENST00000604188 ABCC8Q09428 1581 aa33.88■■■■□ 3.01
SMAGP-206ENST00000604188 CUX1P39880 1505 aa33.87■■■■□ 3.01
SMAGP-206ENST00000604188 WRNQ14191 1432 aaPredicted RBP eCLIP33.79■■■■□ 3
SMAGP-206ENST00000604188 SYNJ1O43426 1573 aa33.69■■■□□ 2.98
SMAGP-206ENST00000604188 POLA1P09884 1462 aaPredicted RBP33.69■■■□□ 2.98
SMAGP-206ENST00000604188 FGD5Q6ZNL6 1462 aa33.68■■■□□ 2.98
SMAGP-206ENST00000604188 TOP2BQ02880 1626 aa33.62■■■□□ 2.97
SMAGP-206ENST00000604188 IFT140Q96RY7 1462 aa33.6■■■□□ 2.97
SMAGP-206ENST00000604188 RAD54L2Q9Y4B4 1467 aa33.6■■■□□ 2.97
SMAGP-206ENST00000604188 BIVM-ERCC5R4GMW8 1640 aa33.59■■■□□ 2.97
SMAGP-206ENST00000604188 SOGA1O94964 1423 aa33.58■■■□□ 2.97
SMAGP-206ENST00000604188 TARBP1Q13395 1621 aaKnown RBP33.5■■■□□ 2.95
SMAGP-206ENST00000604188 ZNF608Q9ULD9 1512 aaPredicted RBP33.48■■■□□ 2.95
SMAGP-206ENST00000604188 TDRD9Q8NDG6 1382 aaKnown RBP33.38■■■□□ 2.93
SMAGP-206ENST00000604188 TRIM41Q8WV44 630 aa33.36■■■□□ 2.93
SMAGP-206ENST00000604188 AQRO60306 1485 aaKnown RBP eCLIP33.36■■■□□ 2.93
SMAGP-206ENST00000604188 ABCA10Q8WWZ4 1543 aa33.33■■■□□ 2.93
SMAGP-206ENST00000604188 EIF4G3O43432 1585 aaKnown RBP33.3■■■□□ 2.92
SMAGP-206ENST00000604188 WDR97A6NE52 1622 aa33.28■■■□□ 2.92
SMAGP-206ENST00000604188 CHIC1Q5VXU3 224 aa33.25■■■□□ 2.91
SMAGP-206ENST00000604188 GAPVD1Q14C86 1478 aa33.18■■■□□ 2.9
SMAGP-206ENST00000604188 ABCA5Q8WWZ7 1642 aa33.14■■■□□ 2.9
SMAGP-206ENST00000604188 GRIN2BQ13224 1484 aa33.1■■■□□ 2.89
SMAGP-206ENST00000604188 KIF27Q86VH2 1401 aa33.04■■■□□ 2.88
SMAGP-206ENST00000604188 SNAPC4Q5SXM2 1469 aa33.04■■■□□ 2.88
SMAGP-206ENST00000604188 PBRM1Q86U86 1689 aa33.01■■■□□ 2.88
SMAGP-206ENST00000604188 RUSC2Q8N2Y8 1516 aa32.97■■■□□ 2.87
SMAGP-206ENST00000604188 FBLN2P98095 1184 aa32.93■■■□□ 2.86
SMAGP-206ENST00000604188 MAGI1Q96QZ7 1491 aaPredicted RBP32.93■■■□□ 2.86
SMAGP-206ENST00000604188 ERICH3Q5RHP9 1530 aa32.91■■■□□ 2.86
SMAGP-206ENST00000604188 IGF1RP08069 1367 aa32.89■■■□□ 2.86
SMAGP-206ENST00000604188 CHMP7Q8WUX9 453 aaPredicted RBP32.84■■■□□ 2.85
SMAGP-206ENST00000604188 SYNJ2O15056 1496 aa32.82■■■□□ 2.84
SMAGP-206ENST00000604188 ADAMTS12P58397 1594 aa32.82■■■□□ 2.84
SMAGP-206ENST00000604188 FHAD1B1AJZ9 1412 aa32.79■■■□□ 2.84
SMAGP-206ENST00000604188 CHD1O14646 1710 aa32.78■■■□□ 2.84
SMAGP-206ENST00000604188 FAM9AQ8IZU1 332 aaPredicted RBP32.77■■■□□ 2.84
SMAGP-206ENST00000604188 OSCARQ8IYS5 282 aa32.74■■■□□ 2.83
SMAGP-206ENST00000604188 CARMIL1Q5VZK9 1371 aa32.7■■■□□ 2.83
SMAGP-206ENST00000604188 GRIN2AQ12879 1464 aa32.67■■■□□ 2.82
SMAGP-206ENST00000604188 CUL7Q14999 1698 aa32.67■■■□□ 2.82
SMAGP-206ENST00000604188 EEA1Q15075 1411 aa32.64■■■□□ 2.82
SMAGP-206ENST00000604188 CSRNP3Q8WYN3 585 aa32.64■■■□□ 2.82
SMAGP-206ENST00000604188 DNAJC5Q9H3Z4 198 aa32.53■■■□□ 2.8
SMAGP-206ENST00000604188 RAPGEF2Q9Y4G8 1499 aa32.53■■■□□ 2.8
SMAGP-206ENST00000604188 PRXQ9BXM0 1461 aa32.51■■■□□ 2.79
SMAGP-206ENST00000604188 NUP160Q12769 1436 aa32.51■■■□□ 2.79
SMAGP-206ENST00000604188 CEP170Q5SW79 1584 aa32.5■■■□□ 2.79
SMAGP-206ENST00000604188 CLASP1Q7Z460 1538 aa32.44■■■□□ 2.78
SMAGP-206ENST00000604188 EHMT2Q96KQ7 1210 aa32.38■■■□□ 2.77
SMAGP-206ENST00000604188 KIAA0586Q9BVV6 1533 aa32.3■■■□□ 2.76
Retrieved 100 of 20,778 RNA–protein pairs in 77.2 ms