Protein–RNA interactions for Protein: P07988

SFTPB, Pulmonary surfactant-associated protein B, humanhuman

Predictions only

Length 381 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SFTPBP07988 MZB1-201ENST00000302125 825 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
SFTPBP07988 AC011611.3-201ENST00000552367 569 ntTSL 4 BASIC16.78■□□□□ 0.28
SFTPBP07988 ATRAID-208ENST00000611786 1256 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
SFTPBP07988 WIPF1-205ENST00000409415 1772 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
SFTPBP07988 PRR36-202ENST00000618550 4456 ntAPPRIS P2 TSL 5 BASIC16.78■□□□□ 0.28
SFTPBP07988 ARNTL-203ENST00000403290 2746 ntAPPRIS ALT1 TSL 1 (best) BASIC16.78■□□□□ 0.28
SFTPBP07988 PCBP3-206ENST00000400314 2202 ntAPPRIS P2 TSL 5 BASIC16.78■□□□□ 0.28
SFTPBP07988 TRMT6-202ENST00000453074 2239 ntTSL 2 BASIC16.78■□□□□ 0.28
SFTPBP07988 STARD3-219ENST00000580611 1989 ntTSL 5 BASIC16.78■□□□□ 0.28
SFTPBP07988 PLA2R1-202ENST00000392771 5160 ntAPPRIS ALT2 TSL 1 (best) BASIC16.78■□□□□ 0.28
SFTPBP07988 SPEG-203ENST00000396688 1457 ntTSL 3 BASIC16.78■□□□□ 0.28
SFTPBP07988 MIF-AS1-201ENST00000406213 1476 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
SFTPBP07988 EWSR1-208ENST00000414183 2189 ntAPPRIS P4 TSL 2 BASIC16.78■□□□□ 0.28
SFTPBP07988 TMSB15B-201ENST00000419165 1666 ntAPPRIS P1 TSL 2 BASIC16.78■□□□□ 0.28
SFTPBP07988 P2RY6-210ENST00000542092 1674 ntAPPRIS P1 TSL 2 BASIC16.78■□□□□ 0.28
SFTPBP07988 EHMT1-236ENST00000637161 5049 ntAPPRIS ALT2 TSL 5 BASIC16.78■□□□□ 0.28
SFTPBP07988 PRDM1-202ENST00000369091 2612 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
SFTPBP07988 FAM170B-201ENST00000311787 1401 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
SFTPBP07988 ADORA2A-201ENST00000337539 2569 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
SFTPBP07988 MBD3-207ENST00000590550 2782 ntTSL 2 BASIC16.77■□□□□ 0.28
SFTPBP07988 PUF60-202ENST00000349157 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC16.77■□□□□ 0.28
SFTPBP07988 AC009133.6-201ENST00000609618 2252 ntAPPRIS P1 TSL 5 BASIC16.77■□□□□ 0.28
SFTPBP07988 SEMA3B-210ENST00000611067 2292 ntAPPRIS ALT2 TSL 1 (best) BASIC16.77■□□□□ 0.28
SFTPBP07988 CDKN1C-203ENST00000430149 1570 ntAPPRIS P3 TSL 1 (best) BASIC16.77■□□□□ 0.28
SFTPBP07988 NIPAL2-202ENST00000430223 4496 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
SFTPBP07988 MICU3-201ENST00000318063 3992 ntAPPRIS P2 TSL 1 (best) BASIC16.77■□□□□ 0.28
SFTPBP07988 BCAT2-208ENST00000598162 1329 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
SFTPBP07988 GRAMD2B-219ENST00000544396 2822 ntTSL 2 BASIC16.77■□□□□ 0.28
SFTPBP07988 NOTCH3-201ENST00000263388 8666 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
SFTPBP07988 ACOT4-201ENST00000326303 2362 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
SFTPBP07988 PCDHB14-202ENST00000624896 2367 ntTSL 2 BASIC16.77■□□□□ 0.28
SFTPBP07988 RUNX1-207ENST00000437180 5967 ntAPPRIS P3 TSL 5 BASIC16.77■□□□□ 0.28
SFTPBP07988 NENF-201ENST00000366988 949 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
SFTPBP07988 AL359182.2-201ENST00000457720 606 ntTSL 3 BASIC16.77■□□□□ 0.28
SFTPBP07988 DIMT1-202ENST00000506390 1208 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
SFTPBP07988 RRAS2-203ENST00000526063 970 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
SFTPBP07988 RRAS2-208ENST00000532814 982 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
SFTPBP07988 AC006435.1-201ENST00000571775 1065 ntTSL 5 BASIC16.77■□□□□ 0.28
SFTPBP07988 TMEM53-202ENST00000372237 2310 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
SFTPBP07988 GOLPH3-201ENST00000265070 2721 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
SFTPBP07988 NEURL3-202ENST00000435380 1675 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
SFTPBP07988 DNLZ-202ENST00000371739 2934 ntTSL 5 BASIC16.77■□□□□ 0.27
SFTPBP07988 KRT83-201ENST00000293670 1875 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
SFTPBP07988 INTS11-250ENST00000620829 1862 ntTSL 2 BASIC16.77■□□□□ 0.27
SFTPBP07988 GPR31-201ENST00000366834 2059 ntAPPRIS P1 BASIC16.77■□□□□ 0.27
SFTPBP07988 LRP4-201ENST00000378623 8076 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
SFTPBP07988 ARHGAP28-203ENST00000383472 2295 ntAPPRIS ALT2 TSL 5 BASIC16.77■□□□□ 0.27
SFTPBP07988 CCNJ-203ENST00000465148 2677 ntAPPRIS P1 TSL 2 BASIC16.77■□□□□ 0.27
SFTPBP07988 WWP1-202ENST00000517970 4686 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
SFTPBP07988 SLC36A1-209ENST00000521925 1621 ntTSL 1 (best) BASIC16.77■□□□□ 0.27
SFTPBP07988 PTBP1-220ENST00000627714 2201 ntTSL 5 BASIC16.77■□□□□ 0.27
SFTPBP07988 TDRKH-203ENST00000368824 2824 ntAPPRIS P2 TSL 1 (best) BASIC16.77■□□□□ 0.27
SFTPBP07988 FHL1-219ENST00000618438 2178 ntTSL 3 BASIC16.77■□□□□ 0.27
SFTPBP07988 GTF3C5-203ENST00000372099 1999 ntTSL 5 BASIC16.77■□□□□ 0.27
SFTPBP07988 TBC1D10A-204ENST00000403477 1950 ntAPPRIS ALT2 TSL 2 BASIC16.77■□□□□ 0.27
SFTPBP07988 PITX3-201ENST00000370002 1391 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
SFTPBP07988 TPCN2-201ENST00000294309 2931 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
SFTPBP07988 SMPD4-202ENST00000409031 4896 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
SFTPBP07988 CARD9-201ENST00000371732 2123 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
SFTPBP07988 RAI1-201ENST00000353383 7662 ntAPPRIS P2 TSL 1 (best) BASIC16.76■□□□□ 0.27
SFTPBP07988 TOR2A-203ENST00000373284 1523 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
SFTPBP07988 MOK-233ENST00000524214 1539 ntTSL 2 BASIC16.76■□□□□ 0.27
SFTPBP07988 QTRT1-201ENST00000250237 1317 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
SFTPBP07988 EVPL-202ENST00000586740 6223 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
SFTPBP07988 KRT8-217ENST00000619952 2437 ntTSL 2 BASIC16.76■□□□□ 0.27
SFTPBP07988 AKIRIN2-201ENST00000257787 1662 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
SFTPBP07988 SLC16A5-206ENST00000580123 2019 ntAPPRIS P2 TSL 2 BASIC16.76■□□□□ 0.27
SFTPBP07988 SMG5-201ENST00000361813 4559 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
SFTPBP07988 MCF2L-208ENST00000397030 6580 ntTSL 2 BASIC16.76■□□□□ 0.27
SFTPBP07988 INTS11-209ENST00000450926 1839 ntTSL 5 BASIC16.76■□□□□ 0.27
SFTPBP07988 MEA1-201ENST00000244711 1089 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
SFTPBP07988 CFC1-201ENST00000259216 1046 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
SFTPBP07988 CFC1B-201ENST00000281882 1071 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
SFTPBP07988 ZNF580-201ENST00000325333 1261 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
SFTPBP07988 NUDT8-202ENST00000376693 728 ntAPPRIS ALT2 TSL 2 BASIC16.76■□□□□ 0.27
SFTPBP07988 CCDC103-202ENST00000410006 921 ntAPPRIS P1 TSL 2 BASIC16.76■□□□□ 0.27
SFTPBP07988 NAA60-204ENST00000421765 1045 ntTSL 2 BASIC16.76■□□□□ 0.27
SFTPBP07988 NME6-213ENST00000451657 871 ntTSL 2 BASIC16.76■□□□□ 0.27
SFTPBP07988 FAM201B-201ENST00000458407 597 ntBASIC16.76■□□□□ 0.27
SFTPBP07988 ZNF580-203ENST00000545125 1025 ntAPPRIS P1 TSL 3 BASIC16.76■□□□□ 0.27
SFTPBP07988 AL049874.3-201ENST00000557618 868 ntTSL 3 BASIC16.76■□□□□ 0.27
SFTPBP07988 AF274858.3-202ENST00000569906 755 ntTSL 3 BASIC16.76■□□□□ 0.27
SFTPBP07988 INO80E-214ENST00000620599 515 ntTSL 2 BASIC16.76■□□□□ 0.27
SFTPBP07988 CASKIN2-201ENST00000321617 5015 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
SFTPBP07988 MIDN-206ENST00000591446 3243 ntAPPRIS P2 TSL 1 (best) BASIC16.76■□□□□ 0.27
SFTPBP07988 DBNDD2-203ENST00000372710 1417 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
SFTPBP07988 ZBTB7B-201ENST00000292176 2129 ntAPPRIS P3 TSL 1 (best) BASIC16.76■□□□□ 0.27
SFTPBP07988 SDCBP-204ENST00000447182 2103 ntAPPRIS ALT1 TSL 1 (best) BASIC16.76■□□□□ 0.27
SFTPBP07988 CDK5R1-201ENST00000313401 4325 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
SFTPBP07988 FAM129C-208ENST00000599164 2073 ntAPPRIS ALT2 TSL 2 BASIC16.76■□□□□ 0.27
SFTPBP07988 EARS2-206ENST00000563232 1709 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
SFTPBP07988 TSPAN14-203ENST00000372156 1380 ntAPPRIS P1 TSL 5 BASIC16.76■□□□□ 0.27
SFTPBP07988 CLDN5-204ENST00000618236 1374 ntAPPRIS P1 BASIC16.76■□□□□ 0.27
SFTPBP07988 CPEB3-203ENST00000614585 5789 ntAPPRIS P3 TSL 5 BASIC16.75■□□□□ 0.27
SFTPBP07988 SOGA3-203ENST00000525778 4077 ntAPPRIS P1 TSL 5 BASIC16.75■□□□□ 0.27
SFTPBP07988 ZNFX1-203ENST00000371754 5235 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
SFTPBP07988 SGSM2-201ENST00000268989 4863 ntAPPRIS P3 TSL 1 (best) BASIC16.75■□□□□ 0.27
SFTPBP07988 RND1-201ENST00000309739 1681 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
SFTPBP07988 CD247-202ENST00000392122 1678 ntAPPRIS ALT1 TSL 1 (best) BASIC16.75■□□□□ 0.27
SFTPBP07988 STK16-201ENST00000396738 1673 ntAPPRIS P1 TSL 2 BASIC16.75■□□□□ 0.27
Retrieved 100 of 98,524 protein–RNA pairs in 34.6 ms