Protein–RNA interactions for Protein: S4R434

TMEM56-RWDD3, TMEM56-RWDD3 readthrough, humanhuman

Predictions only

Length 201 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM56-RWDD3S4R434 AC087457.1-201ENST00000503496 2727 ntTSL 2 BASIC15.85■□□□□ 0.13
TMEM56-RWDD3S4R434 OBSL1-203ENST00000373876 5503 ntTSL 5 BASIC15.85■□□□□ 0.13
TMEM56-RWDD3S4R434 NFKBIZ-201ENST00000326151 2058 ntTSL 2 BASIC15.85■□□□□ 0.13
TMEM56-RWDD3S4R434 RRN3-205ENST00000563559 2128 ntTSL 5 BASIC15.85■□□□□ 0.13
TMEM56-RWDD3S4R434 SCAMP3-201ENST00000302631 1446 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
TMEM56-RWDD3S4R434 TSSC4-207ENST00000451491 1423 ntAPPRIS P3 TSL 1 (best) BASIC15.85■□□□□ 0.13
TMEM56-RWDD3S4R434 CARMIL2-201ENST00000334583 4687 ntAPPRIS P3 TSL 1 (best) BASIC15.85■□□□□ 0.13
TMEM56-RWDD3S4R434 BTBD11-201ENST00000280758 5767 ntAPPRIS P3 TSL 5 BASIC15.85■□□□□ 0.13
TMEM56-RWDD3S4R434 CLDND1-203ENST00000394181 2170 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
TMEM56-RWDD3S4R434 SLC35E1-208ENST00000595753 5099 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
TMEM56-RWDD3S4R434 MRM3-201ENST00000304478 1809 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
TMEM56-RWDD3S4R434 CELF6-205ENST00000567083 1496 ntAPPRIS ALT2 TSL 2 BASIC15.84■□□□□ 0.13
TMEM56-RWDD3S4R434 PITPNC1-201ENST00000299954 6359 ntAPPRIS ALT2 TSL 5 BASIC15.84■□□□□ 0.13
TMEM56-RWDD3S4R434 SYNDIG1L-201ENST00000331628 2607 ntAPPRIS P1 TSL 5 BASIC15.84■□□□□ 0.13
TMEM56-RWDD3S4R434 WNK2-202ENST00000395477 6834 ntAPPRIS ALT2 TSL 5 BASIC15.84■□□□□ 0.13
TMEM56-RWDD3S4R434 TSGA10IP-203ENST00000532620 1925 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
TMEM56-RWDD3S4R434 SIX5-203ENST00000560168 1975 ntTSL 4 BASIC15.84■□□□□ 0.13
TMEM56-RWDD3S4R434 FP475955.4-201ENST00000623131 1990 ntBASIC15.84■□□□□ 0.13
TMEM56-RWDD3S4R434 C16orf95-201ENST00000253461 953 ntAPPRIS P3 TSL 1 (best) BASIC15.84■□□□□ 0.13
TMEM56-RWDD3S4R434 ETHE1-201ENST00000292147 963 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
TMEM56-RWDD3S4R434 ARL6IP4-205ENST00000412505 818 ntTSL 5 BASIC15.84■□□□□ 0.13
TMEM56-RWDD3S4R434 KRT18P11-201ENST00000435214 1283 ntBASIC15.84■□□□□ 0.13
TMEM56-RWDD3S4R434 AC007161.3-201ENST00000469183 637 ntTSL 5 BASIC15.84■□□□□ 0.13
TMEM56-RWDD3S4R434 CDKN2A-210ENST00000530628 748 ntAPPRIS P1 TSL 5 BASIC15.84■□□□□ 0.13
TMEM56-RWDD3S4R434 SEPHS1-206ENST00000545675 2988 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
TMEM56-RWDD3S4R434 AC106738.2-202ENST00000558156 533 ntTSL 4 BASIC15.84■□□□□ 0.13
TMEM56-RWDD3S4R434 AC005697.1-201ENST00000582441 582 ntAPPRIS P1 TSL 4 BASIC15.84■□□□□ 0.13
TMEM56-RWDD3S4R434 AATF-208ENST00000619387 2141 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
TMEM56-RWDD3S4R434 GGTLC3-201ENST00000619998 968 ntAPPRIS P1 TSL 5 BASIC15.84■□□□□ 0.13
TMEM56-RWDD3S4R434 GDF6-203ENST00000621429 1179 ntTSL 5 BASIC15.84■□□□□ 0.13
TMEM56-RWDD3S4R434 IDH3G-202ENST00000370092 1712 ntTSL 5 BASIC15.84■□□□□ 0.13
TMEM56-RWDD3S4R434 SERPINE2-201ENST00000258405 2195 ntAPPRIS P3 TSL 1 (best) BASIC15.84■□□□□ 0.13
TMEM56-RWDD3S4R434 PODXL2-201ENST00000342480 2186 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
TMEM56-RWDD3S4R434 CD177-203ENST00000618265 2222 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
TMEM56-RWDD3S4R434 ANKS1A-201ENST00000360359 6347 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
TMEM56-RWDD3S4R434 ADARB1-201ENST00000348831 6882 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
TMEM56-RWDD3S4R434 SPESP1-201ENST00000310673 1431 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
TMEM56-RWDD3S4R434 LINC01505-207ENST00000637185 1540 ntTSL 5 BASIC15.84■□□□□ 0.13
TMEM56-RWDD3S4R434 CFP-203ENST00000396992 1592 ntAPPRIS P2 TSL 1 (best) BASIC15.83■□□□□ 0.13
TMEM56-RWDD3S4R434 TUBG1-201ENST00000251413 1611 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.13
TMEM56-RWDD3S4R434 PGLYRP2-202ENST00000340880 2230 ntAPPRIS P2 TSL 1 (best) BASIC15.83■□□□□ 0.13
TMEM56-RWDD3S4R434 ZNF446-203ENST00000594369 2238 ntAPPRIS P2 TSL 1 (best) BASIC15.83■□□□□ 0.13
TMEM56-RWDD3S4R434 C19orf48-202ENST00000391812 1666 ntAPPRIS P1 TSL 2 BASIC15.83■□□□□ 0.13
TMEM56-RWDD3S4R434 FOXI3-201ENST00000428390 2804 ntAPPRIS P1 TSL 3 BASIC15.83■□□□□ 0.13
TMEM56-RWDD3S4R434 SNAI3-201ENST00000332281 1732 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.13
TMEM56-RWDD3S4R434 TRABD-201ENST00000303434 2329 ntAPPRIS P3 TSL 1 (best) BASIC15.83■□□□□ 0.12
TMEM56-RWDD3S4R434 PPFIA1-202ENST00000389547 4133 ntAPPRIS ALT1 TSL 1 (best) BASIC15.83■□□□□ 0.12
TMEM56-RWDD3S4R434 KRCC1-201ENST00000347055 1753 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
TMEM56-RWDD3S4R434 SIGLEC10-204ENST00000436984 1776 ntTSL 2 BASIC15.83■□□□□ 0.12
TMEM56-RWDD3S4R434 TWF1-201ENST00000395510 3045 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
TMEM56-RWDD3S4R434 MZB1-201ENST00000302125 825 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
TMEM56-RWDD3S4R434 ASIP-201ENST00000374954 586 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
TMEM56-RWDD3S4R434 RASGRP2-203ENST00000377486 667 ntTSL 3 BASIC15.83■□□□□ 0.12
TMEM56-RWDD3S4R434 CD99P1-203ENST00000431582 602 ntTSL 4 BASIC15.83■□□□□ 0.12
TMEM56-RWDD3S4R434 AC025754.1-201ENST00000507566 407 ntTSL 3 BASIC15.83■□□□□ 0.12
TMEM56-RWDD3S4R434 FAM47E-204ENST00000510328 1002 ntAPPRIS ALT2 TSL 2 BASIC15.83■□□□□ 0.12
TMEM56-RWDD3S4R434 EDA-209ENST00000525810 843 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
TMEM56-RWDD3S4R434 EDA-210ENST00000527388 927 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
TMEM56-RWDD3S4R434 ELAC1-204ENST00000591429 975 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
TMEM56-RWDD3S4R434 STEAP1-201ENST00000297205 1313 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
TMEM56-RWDD3S4R434 SNN-201ENST00000329565 3312 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
TMEM56-RWDD3S4R434 ZBTB10-205ENST00000610895 2833 ntAPPRIS ALT2 TSL 2 BASIC15.83■□□□□ 0.12
TMEM56-RWDD3S4R434 AC007192.1-201ENST00000593731 5142 ntAPPRIS P1 TSL 2 BASIC15.83■□□□□ 0.12
TMEM56-RWDD3S4R434 SHANK3-203ENST00000445220 5175 ntAPPRIS ALT2 TSL 5 BASIC15.83■□□□□ 0.12
TMEM56-RWDD3S4R434 PKN1-201ENST00000242783 3069 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
TMEM56-RWDD3S4R434 AC008060.1-201ENST00000401499 1551 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
TMEM56-RWDD3S4R434 WDR41-208ENST00000507029 1553 ntTSL 2 BASIC15.83■□□□□ 0.12
TMEM56-RWDD3S4R434 PRODH-215ENST00000610940 2405 ntAPPRIS P3 TSL 1 (best) BASIC15.83■□□□□ 0.12
TMEM56-RWDD3S4R434 TP53I3-202ENST00000335934 1635 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
TMEM56-RWDD3S4R434 CPT2-207ENST00000636867 2643 ntTSL 5 BASIC15.82■□□□□ 0.12
TMEM56-RWDD3S4R434 ACAT1-201ENST00000265838 1761 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
TMEM56-RWDD3S4R434 EFTUD1P1-204ENST00000560401 1798 ntBASIC15.82■□□□□ 0.12
TMEM56-RWDD3S4R434 ZNF419-207ENST00000442920 1857 ntAPPRIS ALT2 TSL 2 BASIC15.82■□□□□ 0.12
TMEM56-RWDD3S4R434 SIL1-202ENST00000394817 1923 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
TMEM56-RWDD3S4R434 L2HGDH-203ENST00000421284 1958 ntAPPRIS P1 TSL 2 BASIC15.82■□□□□ 0.12
TMEM56-RWDD3S4R434 AL512353.2-201ENST00000448759 1962 ntBASIC15.82■□□□□ 0.12
TMEM56-RWDD3S4R434 TCTN1-223ENST00000550703 2149 ntTSL 2 BASIC15.82■□□□□ 0.12
TMEM56-RWDD3S4R434 CASC2-205ENST00000454781 2216 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
TMEM56-RWDD3S4R434 MAN1B1-207ENST00000535144 2296 ntTSL 2 BASIC15.82■□□□□ 0.12
TMEM56-RWDD3S4R434 HCFC1R1-201ENST00000248089 965 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
TMEM56-RWDD3S4R434 GPX1-202ENST00000419783 1146 ntAPPRIS P2 TSL 1 (best) BASIC15.82■□□□□ 0.12
TMEM56-RWDD3S4R434 ZNF467-202ENST00000484747 913 ntTSL 2 BASIC15.82■□□□□ 0.12
TMEM56-RWDD3S4R434 RPH3AL-203ENST00000536489 1235 ntTSL 2 BASIC15.82■□□□□ 0.12
TMEM56-RWDD3S4R434 AC140479.5-201ENST00000568189 735 ntTSL 3 BASIC15.82■□□□□ 0.12
TMEM56-RWDD3S4R434 HCFC1R1-207ENST00000574980 845 ntTSL 5 BASIC15.82■□□□□ 0.12
TMEM56-RWDD3S4R434 AC011446.1-201ENST00000591825 458 ntTSL 2 BASIC15.82■□□□□ 0.12
TMEM56-RWDD3S4R434 ACYP2-207ENST00000606082 713 ntTSL 5 BASIC15.82■□□□□ 0.12
TMEM56-RWDD3S4R434 TNFRSF11A-207ENST00000639222 855 ntAPPRIS ALT2 TSL 5 BASIC15.82■□□□□ 0.12
TMEM56-RWDD3S4R434 KIF16B-206ENST00000636835 5109 ntAPPRIS ALT2 TSL 1 (best) BASIC15.82■□□□□ 0.12
TMEM56-RWDD3S4R434 AC068338.2-201ENST00000563278 1430 ntBASIC15.82■□□□□ 0.12
TMEM56-RWDD3S4R434 SYBU-201ENST00000276646 2870 ntAPPRIS ALT2 TSL 1 (best) BASIC15.82■□□□□ 0.12
TMEM56-RWDD3S4R434 PDLIM2-221ENST00000622702 1490 ntTSL 5 BASIC15.82■□□□□ 0.12
TMEM56-RWDD3S4R434 CCDC106-201ENST00000308964 1546 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
TMEM56-RWDD3S4R434 TFP1-202ENST00000475455 1573 ntBASIC15.82■□□□□ 0.12
TMEM56-RWDD3S4R434 TMEM230-207ENST00000379286 1735 ntAPPRIS P1 TSL 2 BASIC15.82■□□□□ 0.12
TMEM56-RWDD3S4R434 TRIM63-201ENST00000374272 1770 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
TMEM56-RWDD3S4R434 LINC01586-201ENST00000506090 1840 ntTSL 2 BASIC15.82■□□□□ 0.12
TMEM56-RWDD3S4R434 FER1L4-211ENST00000616283 1818 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
TMEM56-RWDD3S4R434 AL354751.1-201ENST00000412768 1863 ntBASIC15.82■□□□□ 0.12
TMEM56-RWDD3S4R434 TFCP2-204ENST00000548115 1862 ntTSL 5 BASIC15.82■□□□□ 0.12
Retrieved 100 of 98,524 protein–RNA pairs in 63 ms