RNA–Protein interactions for RNA: ENST00000536489.6

RPH3AL-203, Transcript of rabphilin 3A like (without C2 domains), humanhuman

TSL 2 BASIC

Gene RPH3AL, Length 1,235 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPH3AL-203ENST00000536489 NISCHQ9Y2I1 1504 aa47.11■■■■■ 5.13
RPH3AL-203ENST00000536489 CCDC180Q9P1Z9 1646 aa41.5■■■■■ 4.23
RPH3AL-203ENST00000536489 ABCC9O60706 1549 aa40.19■■■■■ 4.02
RPH3AL-203ENST00000536489 DCAF8L2P0C7V8 631 aa39.35■■■■□ 3.89
RPH3AL-203ENST00000536489 ZCCHC6Q5VYS8 1495 aaKnown RBP39.3■■■■□ 3.88
RPH3AL-203ENST00000536489 NACADO15069 1562 aa39.02■■■■□ 3.84
RPH3AL-203ENST00000536489 DCAF1Q9Y4B6 1507 aa39.01■■■■□ 3.84
RPH3AL-203ENST00000536489 MYO15BQ96JP2 1530 aa39■■■■□ 3.83
RPH3AL-203ENST00000536489 RB1CC1Q8TDY2 1594 aa38.89■■■■□ 3.82
RPH3AL-203ENST00000536489 SCRIBQ14160 1630 aa37.92■■■■□ 3.66
RPH3AL-203ENST00000536489 UNC13AQ9UPW8 1703 aa37.81■■■■□ 3.64
RPH3AL-203ENST00000536489 PABPN1Q86U42 306 aaKnown RBP eCLIP37.77■■■■□ 3.64
RPH3AL-203ENST00000536489 BICRAQ9NZM4 1560 aa37.63■■■■□ 3.61
RPH3AL-203ENST00000536489 SHROOM4Q9ULL8 1493 aa37.58■■■■□ 3.61
RPH3AL-203ENST00000536489 CECR2Q9BXF3 1484 aa36.63■■■■□ 3.45
RPH3AL-203ENST00000536489 EIF4G1Q04637 1599 aaKnown RBP36.62■■■■□ 3.45
RPH3AL-203ENST00000536489 DNAJC5BQ9UF47 199 aa36.49■■■■□ 3.43
RPH3AL-203ENST00000536489 BAZ1AQ9NRL2 1556 aaPredicted RBP36.46■■■■□ 3.43
RPH3AL-203ENST00000536489 SMARCA4P51532 1647 aa36.34■■■■□ 3.41
RPH3AL-203ENST00000536489 CC2D2AQ9P2K1 1620 aa36.33■■■■□ 3.41
RPH3AL-203ENST00000536489 MROH2BQ7Z745 1585 aa36.28■■■■□ 3.4
RPH3AL-203ENST00000536489 RSF1Q96T23 1441 aaPredicted RBP36.15■■■■□ 3.38
RPH3AL-203ENST00000536489 ATAD2BQ9ULI0 1458 aa36.12■■■■□ 3.37
RPH3AL-203ENST00000536489 SMARCA2P51531 1590 aa36.07■■■■□ 3.37
RPH3AL-203ENST00000536489 NCAPD3P42695 1498 aa36.06■■■■□ 3.36
RPH3AL-203ENST00000536489 PEG3Q9GZU2 1588 aa36.02■■■■□ 3.36
RPH3AL-203ENST00000536489 WIZO95785 1651 aa35.85■■■■□ 3.33
RPH3AL-203ENST00000536489 BAZ1BQ9UIG0 1483 aaKnown RBP35.83■■■■□ 3.33
RPH3AL-203ENST00000536489 HMGXB3Q12766 1538 aa35.81■■■■□ 3.32
RPH3AL-203ENST00000536489 SUPT5HO00267 1087 aaKnown RBP35.76■■■■□ 3.32
RPH3AL-203ENST00000536489 TOP2AP11388 1531 aaKnown RBP35.55■■■■□ 3.28
RPH3AL-203ENST00000536489 CCDC88BA6NC98 1476 aa35.22■■■■□ 3.23
RPH3AL-203ENST00000536489 CADPSQ9ULU8 1353 aa35.07■■■■□ 3.2
RPH3AL-203ENST00000536489 LAMC3Q9Y6N6 1575 aa34.92■■■■□ 3.18
RPH3AL-203ENST00000536489 CFTRP13569 1480 aa34.92■■■■□ 3.18
RPH3AL-203ENST00000536489 NESP48681 1621 aa34.91■■■■□ 3.18
RPH3AL-203ENST00000536489 PDS5BQ9NTI5 1447 aa34.8■■■■□ 3.16
RPH3AL-203ENST00000536489 ERCC6Q03468 1493 aa34.63■■■■□ 3.13
RPH3AL-203ENST00000536489 FANCD2Q9BXW9 1451 aa34.58■■■■□ 3.13
RPH3AL-203ENST00000536489 CEP164Q9UPV0 1460 aa34.46■■■■□ 3.11
RPH3AL-203ENST00000536489 PRDM2Q13029 1718 aa34.45■■■■□ 3.11
RPH3AL-203ENST00000536489 KIF21AQ7Z4S6 1674 aa34.39■■■■□ 3.1
RPH3AL-203ENST00000536489 MRC2Q9UBG0 1479 aa34.3■■■■□ 3.08
RPH3AL-203ENST00000536489 ABCC8Q09428 1581 aa34.21■■■■□ 3.07
RPH3AL-203ENST00000536489 THOC2Q8NI27 1593 aaKnown RBP34.15■■■■□ 3.06
RPH3AL-203ENST00000536489 URB2Q14146 1524 aaKnown RBP34.15■■■■□ 3.06
RPH3AL-203ENST00000536489 WDR62O43379 1518 aa34.11■■■■□ 3.05
RPH3AL-203ENST00000536489 WRNQ14191 1432 aaPredicted RBP eCLIP34.07■■■■□ 3.04
RPH3AL-203ENST00000536489 TOPBP1Q92547 1522 aa34.07■■■■□ 3.04
RPH3AL-203ENST00000536489 CUX2O14529 1486 aa34.05■■■■□ 3.04
RPH3AL-203ENST00000536489 DNMBPQ6XZF7 1577 aa34.04■■■■□ 3.04
RPH3AL-203ENST00000536489 CUX1P39880 1505 aa33.99■■■■□ 3.03
RPH3AL-203ENST00000536489 TOP2BQ02880 1626 aa33.84■■■■□ 3.01
RPH3AL-203ENST00000536489 POLA1P09884 1462 aaPredicted RBP33.82■■■■□ 3
RPH3AL-203ENST00000536489 SYNJ1O43426 1573 aa33.81■■■■□ 3
RPH3AL-203ENST00000536489 FGD5Q6ZNL6 1462 aa33.81■■■■□ 3
RPH3AL-203ENST00000536489 SOGA1O94964 1423 aa33.8■■■■□ 3
RPH3AL-203ENST00000536489 TRIM41Q8WV44 630 aa33.8■■■■□ 3
RPH3AL-203ENST00000536489 BIVM-ERCC5R4GMW8 1640 aa33.78■■■■□ 3
RPH3AL-203ENST00000536489 IFT140Q96RY7 1462 aa33.76■■■■□ 3
RPH3AL-203ENST00000536489 CHIC1Q5VXU3 224 aa33.72■■■□□ 2.99
RPH3AL-203ENST00000536489 RAD54L2Q9Y4B4 1467 aa33.69■■■□□ 2.98
RPH3AL-203ENST00000536489 TARBP1Q13395 1621 aaKnown RBP33.59■■■□□ 2.97
RPH3AL-203ENST00000536489 ABCA10Q8WWZ4 1543 aa33.54■■■□□ 2.96
RPH3AL-203ENST00000536489 TDRD9Q8NDG6 1382 aaKnown RBP33.52■■■□□ 2.96
RPH3AL-203ENST00000536489 ZNF608Q9ULD9 1512 aaPredicted RBP33.5■■■□□ 2.95
RPH3AL-203ENST00000536489 AQRO60306 1485 aaKnown RBP eCLIP33.46■■■□□ 2.95
RPH3AL-203ENST00000536489 WDR97A6NE52 1622 aa33.39■■■□□ 2.94
RPH3AL-203ENST00000536489 GAPVD1Q14C86 1478 aa33.37■■■□□ 2.93
RPH3AL-203ENST00000536489 KIF27Q86VH2 1401 aa33.36■■■□□ 2.93
RPH3AL-203ENST00000536489 EIF4G3O43432 1585 aaKnown RBP33.3■■■□□ 2.92
RPH3AL-203ENST00000536489 GRIN2BQ13224 1484 aa33.28■■■□□ 2.92
RPH3AL-203ENST00000536489 ABCA5Q8WWZ7 1642 aa33.24■■■□□ 2.91
RPH3AL-203ENST00000536489 IGF1RP08069 1367 aa33.2■■■□□ 2.9
RPH3AL-203ENST00000536489 ERICH3Q5RHP9 1530 aa33.14■■■□□ 2.9
RPH3AL-203ENST00000536489 RUSC2Q8N2Y8 1516 aa33.13■■■□□ 2.89
RPH3AL-203ENST00000536489 MAGI1Q96QZ7 1491 aaPredicted RBP33.11■■■□□ 2.89
RPH3AL-203ENST00000536489 EEA1Q15075 1411 aa33.11■■■□□ 2.89
RPH3AL-203ENST00000536489 SNAPC4Q5SXM2 1469 aa33.09■■■□□ 2.89
RPH3AL-203ENST00000536489 CHMP7Q8WUX9 453 aaPredicted RBP33.08■■■□□ 2.89
RPH3AL-203ENST00000536489 CSRNP3Q8WYN3 585 aa33.08■■■□□ 2.89
RPH3AL-203ENST00000536489 FBLN2P98095 1184 aa33.05■■■□□ 2.88
RPH3AL-203ENST00000536489 PBRM1Q86U86 1689 aa33.04■■■□□ 2.88
RPH3AL-203ENST00000536489 FHAD1B1AJZ9 1412 aa33.02■■■□□ 2.88
RPH3AL-203ENST00000536489 FAM9AQ8IZU1 332 aaPredicted RBP33.02■■■□□ 2.88
RPH3AL-203ENST00000536489 CARMIL1Q5VZK9 1371 aa33■■■□□ 2.87
RPH3AL-203ENST00000536489 SYNJ2O15056 1496 aa32.98■■■□□ 2.87
RPH3AL-203ENST00000536489 OSCARQ8IYS5 282 aa32.94■■■□□ 2.86
RPH3AL-203ENST00000536489 CUL7Q14999 1698 aa32.88■■■□□ 2.85
RPH3AL-203ENST00000536489 ADAMTS12P58397 1594 aa32.87■■■□□ 2.85
RPH3AL-203ENST00000536489 PRXQ9BXM0 1461 aa32.81■■■□□ 2.84
RPH3AL-203ENST00000536489 RAPGEF2Q9Y4G8 1499 aa32.81■■■□□ 2.84
RPH3AL-203ENST00000536489 GRIN2AQ12879 1464 aa32.8■■■□□ 2.84
RPH3AL-203ENST00000536489 CHD1O14646 1710 aa32.73■■■□□ 2.83
RPH3AL-203ENST00000536489 NUP160Q12769 1436 aa32.66■■■□□ 2.82
RPH3AL-203ENST00000536489 KIF21BO75037 1637 aa32.56■■■□□ 2.8
RPH3AL-203ENST00000536489 CEP170Q5SW79 1584 aa32.54■■■□□ 2.8
RPH3AL-203ENST00000536489 KIAA0586Q9BVV6 1533 aa32.54■■■□□ 2.8
RPH3AL-203ENST00000536489 UBTFP17480 764 aaKnown RBP32.53■■■□□ 2.8
RPH3AL-203ENST00000536489 JPH4Q96JJ6 628 aa32.51■■■□□ 2.79
Retrieved 100 of 20,778 RNA–protein pairs in 15.6 ms