RNA–Protein interactions for RNA: ENST00000304478.8

MRM3-201, Transcript of mitochondrial rRNA methyltransferase 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene MRM3, Length 1,809 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRM3-201ENST00000304478 NISCHQ9Y2I1 1504 aa44.01■■■■■ 4.64
MRM3-201ENST00000304478 CCDC180Q9P1Z9 1646 aa38.5■■■■□ 3.75
MRM3-201ENST00000304478 ZCCHC6Q5VYS8 1495 aaKnown RBP36.96■■■■□ 3.51
MRM3-201ENST00000304478 ABCC9O60706 1549 aa36.47■■■■□ 3.43
MRM3-201ENST00000304478 DCAF1Q9Y4B6 1507 aa36.42■■■■□ 3.42
MRM3-201ENST00000304478 DCAF8L2P0C7V8 631 aa36.3■■■■□ 3.4
MRM3-201ENST00000304478 MYO15BQ96JP2 1530 aa36.06■■■■□ 3.36
MRM3-201ENST00000304478 NACADO15069 1562 aa35.87■■■■□ 3.33
MRM3-201ENST00000304478 SHROOM4Q9ULL8 1493 aa35.73■■■■□ 3.31
MRM3-201ENST00000304478 RB1CC1Q8TDY2 1594 aa35.6■■■■□ 3.29
MRM3-201ENST00000304478 SCRIBQ14160 1630 aa35.33■■■■□ 3.25
MRM3-201ENST00000304478 UNC13AQ9UPW8 1703 aa34.84■■■■□ 3.17
MRM3-201ENST00000304478 BICRAQ9NZM4 1560 aa34.5■■■■□ 3.11
MRM3-201ENST00000304478 PABPN1Q86U42 306 aaKnown RBP eCLIP34.32■■■■□ 3.08
MRM3-201ENST00000304478 SUPT5HO00267 1087 aaKnown RBP34.28■■■■□ 3.08
MRM3-201ENST00000304478 CECR2Q9BXF3 1484 aa34.17■■■■□ 3.06
MRM3-201ENST00000304478 RSF1Q96T23 1441 aaPredicted RBP34.06■■■■□ 3.04
MRM3-201ENST00000304478 BAZ1AQ9NRL2 1556 aaPredicted RBP34.01■■■■□ 3.04
MRM3-201ENST00000304478 MROH2BQ7Z745 1585 aa33.97■■■■□ 3.03
MRM3-201ENST00000304478 SMARCA4P51532 1647 aa33.88■■■■□ 3.01
MRM3-201ENST00000304478 WIZO95785 1651 aa33.69■■■□□ 2.98
MRM3-201ENST00000304478 EIF4G1Q04637 1599 aaKnown RBP33.49■■■□□ 2.95
MRM3-201ENST00000304478 PEG3Q9GZU2 1588 aa33.48■■■□□ 2.95
MRM3-201ENST00000304478 TOP2AP11388 1531 aaKnown RBP33.38■■■□□ 2.93
MRM3-201ENST00000304478 SMARCA2P51531 1590 aa33.35■■■□□ 2.93
MRM3-201ENST00000304478 ATAD2BQ9ULI0 1458 aa33.34■■■□□ 2.93
MRM3-201ENST00000304478 BAZ1BQ9UIG0 1483 aaKnown RBP33.16■■■□□ 2.9
MRM3-201ENST00000304478 NCAPD3P42695 1498 aa33.08■■■□□ 2.89
MRM3-201ENST00000304478 HMGXB3Q12766 1538 aa33.07■■■□□ 2.88
MRM3-201ENST00000304478 CC2D2AQ9P2K1 1620 aa33.02■■■□□ 2.88
MRM3-201ENST00000304478 CCDC88BA6NC98 1476 aa32.99■■■□□ 2.87
MRM3-201ENST00000304478 CHIC1Q5VXU3 224 aa32.75■■■□□ 2.83
MRM3-201ENST00000304478 CFTRP13569 1480 aa32.31■■■□□ 2.76
MRM3-201ENST00000304478 TRIM41Q8WV44 630 aa32.28■■■□□ 2.76
MRM3-201ENST00000304478 ABCC8Q09428 1581 aa32.25■■■□□ 2.75
MRM3-201ENST00000304478 CADPSQ9ULU8 1353 aa32.22■■■□□ 2.75
MRM3-201ENST00000304478 DNAJC5BQ9UF47 199 aa32.21■■■□□ 2.75
MRM3-201ENST00000304478 PRDM2Q13029 1718 aa32.17■■■□□ 2.74
MRM3-201ENST00000304478 WRNQ14191 1432 aaPredicted RBP eCLIP32.09■■■□□ 2.73
MRM3-201ENST00000304478 LAMC3Q9Y6N6 1575 aa32.01■■■□□ 2.71
MRM3-201ENST00000304478 NESP48681 1621 aa31.96■■■□□ 2.71
MRM3-201ENST00000304478 SYNJ1O43426 1573 aa31.95■■■□□ 2.71
MRM3-201ENST00000304478 FANCD2Q9BXW9 1451 aa31.87■■■□□ 2.69
MRM3-201ENST00000304478 TOP2BQ02880 1626 aa31.85■■■□□ 2.69
MRM3-201ENST00000304478 BIVM-ERCC5R4GMW8 1640 aa31.84■■■□□ 2.69
MRM3-201ENST00000304478 CUX1P39880 1505 aa31.79■■■□□ 2.68
MRM3-201ENST00000304478 PDS5BQ9NTI5 1447 aa31.75■■■□□ 2.67
MRM3-201ENST00000304478 CEP164Q9UPV0 1460 aa31.7■■■□□ 2.67
MRM3-201ENST00000304478 FAM9AQ8IZU1 332 aaPredicted RBP31.65■■■□□ 2.66
MRM3-201ENST00000304478 KIF21AQ7Z4S6 1674 aa31.6■■■□□ 2.65
MRM3-201ENST00000304478 SOGA1O94964 1423 aa31.6■■■□□ 2.65
MRM3-201ENST00000304478 DNMBPQ6XZF7 1577 aa31.59■■■□□ 2.65
MRM3-201ENST00000304478 EEA1Q15075 1411 aa31.58■■■□□ 2.65
MRM3-201ENST00000304478 TOPBP1Q92547 1522 aa31.51■■■□□ 2.64
MRM3-201ENST00000304478 FGD5Q6ZNL6 1462 aa31.48■■■□□ 2.63
MRM3-201ENST00000304478 URB2Q14146 1524 aaKnown RBP31.47■■■□□ 2.63
MRM3-201ENST00000304478 RUSC2Q8N2Y8 1516 aa31.47■■■□□ 2.63
MRM3-201ENST00000304478 LOC105371045A0A1W2PR82 267 aa31.45■■■□□ 2.62
MRM3-201ENST00000304478 MRC2Q9UBG0 1479 aa31.37■■■□□ 2.61
MRM3-201ENST00000304478 CSRNP3Q8WYN3 585 aa31.35■■■□□ 2.61
MRM3-201ENST00000304478 POLA1P09884 1462 aaPredicted RBP31.34■■■□□ 2.61
MRM3-201ENST00000304478 ERCC6Q03468 1493 aa31.32■■■□□ 2.6
MRM3-201ENST00000304478 KIF27Q86VH2 1401 aa31.3■■■□□ 2.6
MRM3-201ENST00000304478 CUX2O14529 1486 aa31.24■■■□□ 2.59
MRM3-201ENST00000304478 RAD54L2Q9Y4B4 1467 aa31.22■■■□□ 2.59
MRM3-201ENST00000304478 WDR62O43379 1518 aa31.21■■■□□ 2.59
MRM3-201ENST00000304478 ABCA10Q8WWZ4 1543 aa31.2■■■□□ 2.59
MRM3-201ENST00000304478 EHMT2Q96KQ7 1210 aa31.18■■■□□ 2.58
MRM3-201ENST00000304478 KIF21BO75037 1637 aa31.17■■■□□ 2.58
MRM3-201ENST00000304478 THOC2Q8NI27 1593 aaKnown RBP31.15■■■□□ 2.58
MRM3-201ENST00000304478 WDR97A6NE52 1622 aa31.14■■■□□ 2.57
MRM3-201ENST00000304478 GOLGA3Q08378 1498 aa31.13■■■□□ 2.57
MRM3-201ENST00000304478 TARBP1Q13395 1621 aaKnown RBP31.05■■■□□ 2.56
MRM3-201ENST00000304478 PRXQ9BXM0 1461 aa31.03■■■□□ 2.56
MRM3-201ENST00000304478 ERICH3Q5RHP9 1530 aa31■■■□□ 2.55
MRM3-201ENST00000304478 IGF1RP08069 1367 aa30.99■■■□□ 2.55
MRM3-201ENST00000304478 RAPGEF2Q9Y4G8 1499 aa30.98■■■□□ 2.55
MRM3-201ENST00000304478 ABCA5Q8WWZ7 1642 aa30.97■■■□□ 2.55
MRM3-201ENST00000304478 TNIKQ9UKE5 1360 aa30.97■■■□□ 2.55
MRM3-201ENST00000304478 IFT140Q96RY7 1462 aa30.96■■■□□ 2.55
MRM3-201ENST00000304478 UBTFP17480 764 aaKnown RBP30.93■■■□□ 2.54
MRM3-201ENST00000304478 TDRD9Q8NDG6 1382 aaKnown RBP30.91■■■□□ 2.54
MRM3-201ENST00000304478 GAPVD1Q14C86 1478 aa30.9■■■□□ 2.54
MRM3-201ENST00000304478 CARMIL1Q5VZK9 1371 aa30.85■■■□□ 2.53
MRM3-201ENST00000304478 CUL7Q14999 1698 aa30.84■■■□□ 2.53
MRM3-201ENST00000304478 CEP162Q5TB80 1403 aa30.79■■■□□ 2.52
MRM3-201ENST00000304478 PBRM1Q86U86 1689 aa30.76■■■□□ 2.51
MRM3-201ENST00000304478 ZNF608Q9ULD9 1512 aaPredicted RBP30.75■■■□□ 2.51
MRM3-201ENST00000304478 AQRO60306 1485 aaKnown RBP eCLIP30.74■■■□□ 2.511e-7■■■■■ 38.9
MRM3-201ENST00000304478 GRIN2BQ13224 1484 aa30.69■■■□□ 2.5
MRM3-201ENST00000304478 EIF4G3O43432 1585 aaKnown RBP30.69■■■□□ 2.5
MRM3-201ENST00000304478 CLIP1P30622 1438 aa30.6■■■□□ 2.49
MRM3-201ENST00000304478 ADAMTS12P58397 1594 aa30.59■■■□□ 2.49
MRM3-201ENST00000304478 FHAD1B1AJZ9 1412 aa30.57■■■□□ 2.48
MRM3-201ENST00000304478 SNAPC4Q5SXM2 1469 aa30.5■■■□□ 2.47
MRM3-201ENST00000304478 CTTNBP2Q8WZ74 1663 aa30.46■■■□□ 2.47
MRM3-201ENST00000304478 MAGI1Q96QZ7 1491 aaPredicted RBP30.46■■■□□ 2.47
MRM3-201ENST00000304478 RANGAP1P46060 587 aaPredicted RBP30.43■■■□□ 2.46
MRM3-201ENST00000304478 SYNJ2O15056 1496 aa30.33■■■□□ 2.45
MRM3-201ENST00000304478 ARHGAP35Q9NRY4 1499 aa30.33■■■□□ 2.45
Retrieved 100 of 20,778 RNA–protein pairs in 13.4 ms