Protein–RNA interactions for Protein: A6NKF2

ARID3C, AT-rich interactive domain-containing protein 3C, humanhuman

Predictions only

Length 412 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ARID3CA6NKF2 SGCE-207ENST00000447873 1597 ntTSL 1 (best) BASIC30.46■■■□□ 2.47
ARID3CA6NKF2 DCTN3-201ENST00000259632 808 ntAPPRIS P1 TSL 1 (best) BASIC30.46■■■□□ 2.47
ARID3CA6NKF2 BECN2-201ENST00000419583 1296 ntAPPRIS P1 BASIC30.46■■■□□ 2.47
ARID3CA6NKF2 MIF4GD-205ENST00000578305 569 ntTSL 5 BASIC30.46■■■□□ 2.47
ARID3CA6NKF2 IRF5-214ENST00000613821 595 ntTSL 5 BASIC30.46■■■□□ 2.47
ARID3CA6NKF2 PRELID3A-201ENST00000336990 1715 ntAPPRIS P1 TSL 2 BASIC30.46■■■□□ 2.47
ARID3CA6NKF2 PRELID3A-202ENST00000440960 1716 ntAPPRIS P1 TSL 1 (best) BASIC30.46■■■□□ 2.47
ARID3CA6NKF2 LCK-214ENST00000619559 2099 ntAPPRIS P1 TSL 1 (best) BASIC30.46■■■□□ 2.47
ARID3CA6NKF2 AC139491.1-201ENST00000512675 1516 ntTSL 1 (best) BASIC30.46■■■□□ 2.47
ARID3CA6NKF2 AP000662.2-202ENST00000530595 2790 ntTSL 2 BASIC30.46■■■□□ 2.47
ARID3CA6NKF2 HLA-G-205ENST00000428701 1578 ntAPPRIS P2 BASIC30.45■■■□□ 2.47
ARID3CA6NKF2 GYG1-202ENST00000345003 2052 ntTSL 1 (best) BASIC30.45■■■□□ 2.47
ARID3CA6NKF2 RABAC1-201ENST00000222008 821 ntAPPRIS P1 TSL 1 (best) BASIC30.45■■■□□ 2.47
ARID3CA6NKF2 BOLA2B-201ENST00000305321 1012 ntAPPRIS P1 TSL 1 (best) BASIC30.45■■■□□ 2.47
ARID3CA6NKF2 BOLA2-201ENST00000330978 1012 ntAPPRIS P1 TSL 1 (best) BASIC30.45■■■□□ 2.47
ARID3CA6NKF2 MRPL43-205ENST00000370234 798 ntTSL 1 (best) BASIC30.45■■■□□ 2.47
ARID3CA6NKF2 DECR2-202ENST00000424398 1012 ntTSL 5 BASIC30.45■■■□□ 2.47
ARID3CA6NKF2 TMEM243-203ENST00000433078 1273 ntAPPRIS P1 TSL 2 BASIC30.45■■■□□ 2.47
ARID3CA6NKF2 TMEM218-206ENST00000527766 812 ntAPPRIS P1 TSL 3 BASIC30.45■■■□□ 2.47
ARID3CA6NKF2 NDUFV2-AS1-203ENST00000608008 779 ntBASIC30.45■■■□□ 2.47
ARID3CA6NKF2 KRT8P41-201ENST00000533985 1514 ntBASIC30.45■■■□□ 2.47
ARID3CA6NKF2 RBFA-202ENST00000306735 1407 ntAPPRIS P1 TSL 1 (best) BASIC30.45■■■□□ 2.46
ARID3CA6NKF2 FAM131A-204ENST00000418281 1664 ntTSL 5 BASIC30.45■■■□□ 2.46
ARID3CA6NKF2 ADAM9-203ENST00000466936 2053 ntTSL 2 BASIC30.45■■■□□ 2.46
ARID3CA6NKF2 CENPH-206ENST00000515001 1305 ntTSL 2 BASIC30.45■■■□□ 2.46
ARID3CA6NKF2 HTATSF1-201ENST00000218364 2775 ntAPPRIS P1 TSL 1 (best) BASIC30.44■■■□□ 2.46
ARID3CA6NKF2 PCSK6-215ENST00000611967 3336 ntTSL 1 (best) BASIC30.44■■■□□ 2.46
ARID3CA6NKF2 EMD-202ENST00000369842 1379 ntAPPRIS P1 TSL 1 (best) BASIC30.44■■■□□ 2.46
ARID3CA6NKF2 WISP2-202ENST00000372865 1518 ntTSL 1 (best) BASIC30.44■■■□□ 2.46
ARID3CA6NKF2 NSDHL-201ENST00000370274 1929 ntAPPRIS P2 TSL 1 (best) BASIC30.44■■■□□ 2.46
ARID3CA6NKF2 TSPAN15-201ENST00000373290 1698 ntAPPRIS P1 TSL 1 (best) BASIC30.44■■■□□ 2.46
ARID3CA6NKF2 CDH5-202ENST00000539168 1672 ntTSL 2 BASIC30.44■■■□□ 2.46
ARID3CA6NKF2 CR769775.1-204ENST00000439760 747 ntTSL 5 BASIC30.44■■■□□ 2.46
ARID3CA6NKF2 TESMIN-209ENST00000544963 1235 ntTSL 1 (best) BASIC30.44■■■□□ 2.46
ARID3CA6NKF2 TRAF7-205ENST00000567653 666 ntTSL 2 BASIC30.44■■■□□ 2.46
ARID3CA6NKF2 LINC01785-201ENST00000598042 1112 ntTSL 1 (best) BASIC30.44■■■□□ 2.46
ARID3CA6NKF2 HYMAI.1-201ENST00000620949 238 ntBASIC30.44■■■□□ 2.46
ARID3CA6NKF2 PPP1R7-207ENST00000407025 1592 ntAPPRIS P1 TSL 5 BASIC30.44■■■□□ 2.46
ARID3CA6NKF2 VLDLR-AS1-205ENST00000599229 1346 ntTSL 1 (best) BASIC30.44■■■□□ 2.46
ARID3CA6NKF2 HMBS-221ENST00000544387 1351 ntTSL 2 BASIC30.43■■■□□ 2.46
ARID3CA6NKF2 C12orf42-205ENST00000548048 1532 ntAPPRIS ALT2 TSL 5 BASIC30.43■■■□□ 2.46
ARID3CA6NKF2 ACBD4-203ENST00000398322 1986 ntAPPRIS P1 TSL 1 (best) BASIC30.43■■■□□ 2.46
ARID3CA6NKF2 OR10H5-201ENST00000308940 1132 ntAPPRIS P1 BASIC30.43■■■□□ 2.46
ARID3CA6NKF2 MTX1-201ENST00000316721 1441 ntTSL 1 (best) BASIC30.43■■■□□ 2.46
ARID3CA6NKF2 HLA-G-201ENST00000360323 1427 ntAPPRIS P2 BASIC30.43■■■□□ 2.46
ARID3CA6NKF2 MALL-203ENST00000427178 1070 ntTSL 1 (best) BASIC30.43■■■□□ 2.46
ARID3CA6NKF2 TSPY21P-201ENST00000433481 731 ntBASIC30.43■■■□□ 2.46
ARID3CA6NKF2 TSPY23P-201ENST00000440136 739 ntBASIC30.43■■■□□ 2.46
ARID3CA6NKF2 AGBL5-AS1-201ENST00000444217 407 ntTSL 5 BASIC30.43■■■□□ 2.46
ARID3CA6NKF2 ZGPAT-206ENST00000448100 1881 ntAPPRIS P1 TSL 1 (best) BASIC30.43■■■□□ 2.46
ARID3CA6NKF2 CKBP1-201ENST00000565489 1086 ntBASIC30.43■■■□□ 2.46
ARID3CA6NKF2 Metazoa_SRP.33-201ENST00000613468 285 ntBASIC30.43■■■□□ 2.46
ARID3CA6NKF2 ALDH3B1-206ENST00000615463 1300 ntTSL 1 (best) BASIC30.43■■■□□ 2.46
ARID3CA6NKF2 WRNIP1-204ENST00000380773 2670 ntAPPRIS P1 TSL 1 (best) BASIC30.42■■■□□ 2.46
ARID3CA6NKF2 ZNF446-208ENST00000622313 1884 ntTSL 1 (best) BASIC30.42■■■□□ 2.46
ARID3CA6NKF2 GTF2IRD2B-208ENST00000619142 1932 ntTSL 1 (best) BASIC30.42■■■□□ 2.46
ARID3CA6NKF2 KRT17-205ENST00000540235 1438 ntTSL 5 BASIC30.42■■■□□ 2.46
ARID3CA6NKF2 PSEN1-203ENST00000394157 1249 ntTSL 2 BASIC30.42■■■□□ 2.46
ARID3CA6NKF2 DAP-202ENST00000432074 1048 ntTSL 2 BASIC30.42■■■□□ 2.46
ARID3CA6NKF2 HIGD1A-204ENST00000452906 585 ntTSL 2 BASIC30.42■■■□□ 2.46
ARID3CA6NKF2 AC127526.4-201ENST00000527970 983 ntTSL 3 BASIC30.42■■■□□ 2.46
ARID3CA6NKF2 FXYD7-203ENST00000586063 456 ntAPPRIS ALT2 TSL 3 BASIC30.42■■■□□ 2.46
ARID3CA6NKF2 AC215522.2-202ENST00000633163 1143 ntTSL 5 BASIC30.42■■■□□ 2.46
ARID3CA6NKF2 HSPB6-201ENST00000004982 1457 ntAPPRIS P1 TSL 1 (best) BASIC30.42■■■□□ 2.46
ARID3CA6NKF2 SUMO3-201ENST00000332859 1807 ntAPPRIS P1 TSL 1 (best) BASIC30.42■■■□□ 2.46
ARID3CA6NKF2 SGTA-201ENST00000221566 2330 ntAPPRIS P1 TSL 1 (best) BASIC30.41■■■□□ 2.46
ARID3CA6NKF2 TMEM110-MUSTN1-202ENST00000504329 1405 ntAPPRIS P1 TSL 5 BASIC30.41■■■□□ 2.46
ARID3CA6NKF2 RRAS-201ENST00000246792 1044 ntAPPRIS P1 TSL 1 (best) BASIC30.41■■■□□ 2.46
ARID3CA6NKF2 YPEL3-201ENST00000398838 935 ntAPPRIS P1 TSL 1 (best) BASIC30.41■■■□□ 2.46
ARID3CA6NKF2 SPDYE15P-201ENST00000424157 909 ntBASIC30.41■■■□□ 2.46
ARID3CA6NKF2 LINC01024-205ENST00000521563 939 ntTSL 3 BASIC30.41■■■□□ 2.46
ARID3CA6NKF2 AP002433.1-201ENST00000525548 964 ntTSL 3 BASIC30.41■■■□□ 2.46
ARID3CA6NKF2 GCSHP2-201ENST00000560971 527 ntBASIC30.41■■■□□ 2.46
ARID3CA6NKF2 CCDC106-206ENST00000591241 1153 ntTSL 3 BASIC30.41■■■□□ 2.46
ARID3CA6NKF2 CENPA-202ENST00000335756 1452 ntAPPRIS P1 TSL 1 (best) BASIC30.41■■■□□ 2.46
ARID3CA6NKF2 SUMF2-202ENST00000342190 1876 ntTSL 1 (best) BASIC30.41■■■□□ 2.46
ARID3CA6NKF2 C1QL4-201ENST00000334221 2071 ntAPPRIS P1 TSL 1 (best) BASIC30.41■■■□□ 2.46
ARID3CA6NKF2 PCSK6-220ENST00000622483 3132 ntAPPRIS ALT2 TSL 1 (best) BASIC30.41■■■□□ 2.46
ARID3CA6NKF2 CA7-202ENST00000394069 1713 ntTSL 1 (best) BASIC30.41■■■□□ 2.46
ARID3CA6NKF2 TMEM175-220ENST00000515740 1514 ntTSL 3 BASIC30.41■■■□□ 2.46
ARID3CA6NKF2 DAZAP2-201ENST00000412716 2598 ntAPPRIS P1 TSL 1 (best) BASIC30.41■■■□□ 2.46
ARID3CA6NKF2 BX119927.1-201ENST00000636596 1552 ntBASIC30.41■■■□□ 2.46
ARID3CA6NKF2 MAGED2-213ENST00000627068 1811 ntAPPRIS ALT2 TSL 5 BASIC30.4■■■□□ 2.46
ARID3CA6NKF2 NUBP2-201ENST00000262302 1413 ntAPPRIS P1 TSL 1 (best) BASIC30.4■■■□□ 2.46
ARID3CA6NKF2 ERVK13-1-203ENST00000564340 1449 ntTSL 1 (best) BASIC30.4■■■□□ 2.46
ARID3CA6NKF2 MKRN1-208ENST00000474576 1661 ntTSL 5 BASIC30.4■■■□□ 2.46
ARID3CA6NKF2 LINC01558-202ENST00000495520 1652 ntTSL 2 BASIC30.4■■■□□ 2.46
ARID3CA6NKF2 NPTXR-201ENST00000333039 5784 ntAPPRIS ALT2 TSL 1 (best) BASIC30.4■■■□□ 2.46
ARID3CA6NKF2 ALG1L9P-201ENST00000508969 2165 ntTSL 1 (best) BASIC30.4■■■□□ 2.46
ARID3CA6NKF2 HDAC11-204ENST00000404040 967 ntTSL 3 BASIC30.4■■■□□ 2.46
ARID3CA6NKF2 KCNMA1-220ENST00000481070 896 ntTSL 2 BASIC30.4■■■□□ 2.46
ARID3CA6NKF2 MRPL46-202ENST00000558531 1002 ntTSL 2 BASIC30.4■■■□□ 2.46
ARID3CA6NKF2 AL136038.3-201ENST00000561909 1096 ntBASIC30.4■■■□□ 2.46
ARID3CA6NKF2 CIZ1-206ENST00000372954 2731 ntAPPRIS ALT2 TSL 1 (best) BASIC30.4■■■□□ 2.46
ARID3CA6NKF2 SLC13A3-204ENST00000413164 2008 ntTSL 2 BASIC30.4■■■□□ 2.46
ARID3CA6NKF2 EDEM1-204ENST00000445686 1363 ntTSL 2 BASIC30.4■■■□□ 2.46
ARID3CA6NKF2 S1PR5-202ENST00000439028 2191 ntAPPRIS P1 TSL 2 BASIC30.39■■■□□ 2.46
ARID3CA6NKF2 COLCA2-201ENST00000398035 1414 ntTSL 1 (best) BASIC30.39■■■□□ 2.46
ARID3CA6NKF2 CCDC71-201ENST00000321895 1781 ntAPPRIS P1 TSL 1 (best) BASIC30.39■■■□□ 2.46
ARID3CA6NKF2 SELENOF-207ENST00000611507 1785 ntTSL 5 BASIC30.39■■■□□ 2.46
Retrieved 100 of 98,524 protein–RNA pairs in 82.2 ms