RNA–Protein interactions for RNA: ENST00000394157.7

PSEN1-203, Transcript of presenilin 1, humanhuman

TSL 2 BASIC

Gene PSEN1, Length 1,249 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSEN1-203ENST00000394157 NISCHQ9Y2I1 1504 aa45.82■■■■■ 4.93
PSEN1-203ENST00000394157 CCDC180Q9P1Z9 1646 aa40.51■■■■■ 4.08
PSEN1-203ENST00000394157 ABCC9O60706 1549 aa38.92■■■■□ 3.82
PSEN1-203ENST00000394157 ZCCHC6Q5VYS8 1495 aaKnown RBP38.3■■■■□ 3.72
PSEN1-203ENST00000394157 AEBP2Q6ZN18 517 aaPredicted RBP38.22■■■■□ 3.71
PSEN1-203ENST00000394157 DCAF1Q9Y4B6 1507 aa38.02■■■■□ 3.68
PSEN1-203ENST00000394157 MYO15BQ96JP2 1530 aa37.97■■■■□ 3.67
PSEN1-203ENST00000394157 NACADO15069 1562 aa37.94■■■■□ 3.66
PSEN1-203ENST00000394157 DCAF8L2P0C7V8 631 aa37.93■■■■□ 3.66
PSEN1-203ENST00000394157 RB1CC1Q8TDY2 1594 aa37.82■■■■□ 3.65
PSEN1-203ENST00000394157 CHIC1Q5VXU3 224 aa37.18■■■■□ 3.54
PSEN1-203ENST00000394157 SCRIBQ14160 1630 aa36.9■■■■□ 3.5
PSEN1-203ENST00000394157 UNC13AQ9UPW8 1703 aa36.88■■■■□ 3.49
PSEN1-203ENST00000394157 BICRAQ9NZM4 1560 aa36.58■■■■□ 3.45
PSEN1-203ENST00000394157 PABPN1Q86U42 306 aaKnown RBP eCLIP36.44■■■■□ 3.42
PSEN1-203ENST00000394157 SHROOM4Q9ULL8 1493 aa36.43■■■■□ 3.42
PSEN1-203ENST00000394157 EIF4G1Q04637 1599 aaKnown RBP35.59■■■■□ 3.29
PSEN1-203ENST00000394157 CECR2Q9BXF3 1484 aa35.55■■■■□ 3.28
PSEN1-203ENST00000394157 BAZ1AQ9NRL2 1556 aaPredicted RBP35.51■■■■□ 3.27
PSEN1-203ENST00000394157 SMARCA4P51532 1647 aa35.41■■■■□ 3.26
PSEN1-203ENST00000394157 MROH2BQ7Z745 1585 aa35.27■■■■□ 3.24
PSEN1-203ENST00000394157 CC2D2AQ9P2K1 1620 aa35.27■■■■□ 3.24
PSEN1-203ENST00000394157 RSF1Q96T23 1441 aaPredicted RBP35.12■■■■□ 3.21
PSEN1-203ENST00000394157 DNAJC5BQ9UF47 199 aa35.11■■■■□ 3.21
PSEN1-203ENST00000394157 PEG3Q9GZU2 1588 aa35.11■■■■□ 3.21
PSEN1-203ENST00000394157 SMARCA2P51531 1590 aa35.1■■■■□ 3.21
PSEN1-203ENST00000394157 ATAD2BQ9ULI0 1458 aa35.07■■■■□ 3.2
PSEN1-203ENST00000394157 NCAPD3P42695 1498 aa34.99■■■■□ 3.19
PSEN1-203ENST00000394157 WIZO95785 1651 aa34.91■■■■□ 3.18
PSEN1-203ENST00000394157 HMGXB3Q12766 1538 aa34.89■■■■□ 3.18
PSEN1-203ENST00000394157 BAZ1BQ9UIG0 1483 aaKnown RBP34.82■■■■□ 3.16
PSEN1-203ENST00000394157 TOP2AP11388 1531 aaKnown RBP34.65■■■■□ 3.14
PSEN1-203ENST00000394157 SUPT5HO00267 1087 aaKnown RBP34.63■■■■□ 3.13
PSEN1-203ENST00000394157 CCDC88BA6NC98 1476 aa34.2■■■■□ 3.07
PSEN1-203ENST00000394157 CADPSQ9ULU8 1353 aa33.99■■■■□ 3.03
PSEN1-203ENST00000394157 LAMC3Q9Y6N6 1575 aa33.97■■■■□ 3.03
PSEN1-203ENST00000394157 CFTRP13569 1480 aa33.92■■■■□ 3.02
PSEN1-203ENST00000394157 NESP48681 1621 aa33.84■■■■□ 3.01
PSEN1-203ENST00000394157 PDS5BQ9NTI5 1447 aa33.73■■■□□ 2.99
PSEN1-203ENST00000394157 PRDM2Q13029 1718 aa33.71■■■□□ 2.99
PSEN1-203ENST00000394157 FANCD2Q9BXW9 1451 aa33.57■■■□□ 2.97
PSEN1-203ENST00000394157 ERCC6Q03468 1493 aa33.55■■■□□ 2.96
PSEN1-203ENST00000394157 KIF21AQ7Z4S6 1674 aa33.49■■■□□ 2.95
PSEN1-203ENST00000394157 CEP164Q9UPV0 1460 aa33.49■■■□□ 2.95
PSEN1-203ENST00000394157 MRC2Q9UBG0 1479 aa33.31■■■□□ 2.92
PSEN1-203ENST00000394157 THOC2Q8NI27 1593 aaKnown RBP33.26■■■□□ 2.91
PSEN1-203ENST00000394157 ABCC8Q09428 1581 aa33.23■■■□□ 2.91
PSEN1-203ENST00000394157 WDR62O43379 1518 aa33.18■■■□□ 2.9
PSEN1-203ENST00000394157 URB2Q14146 1524 aaKnown RBP33.18■■■□□ 2.9
PSEN1-203ENST00000394157 DNMBPQ6XZF7 1577 aa33.14■■■□□ 2.9
PSEN1-203ENST00000394157 WRNQ14191 1432 aaPredicted RBP eCLIP33.11■■■□□ 2.89
PSEN1-203ENST00000394157 TOPBP1Q92547 1522 aa33.11■■■□□ 2.89
PSEN1-203ENST00000394157 CUX1P39880 1505 aa33.07■■■□□ 2.88
PSEN1-203ENST00000394157 CUX2O14529 1486 aa33.02■■■□□ 2.88
PSEN1-203ENST00000394157 TOP2BQ02880 1626 aa32.99■■■□□ 2.87
PSEN1-203ENST00000394157 BIVM-ERCC5R4GMW8 1640 aa32.98■■■□□ 2.87
PSEN1-203ENST00000394157 SYNJ1O43426 1573 aa32.96■■■□□ 2.87
PSEN1-203ENST00000394157 POLA1P09884 1462 aaPredicted RBP32.86■■■□□ 2.85
PSEN1-203ENST00000394157 FGD5Q6ZNL6 1462 aa32.86■■■□□ 2.85
PSEN1-203ENST00000394157 IFT140Q96RY7 1462 aa32.78■■■□□ 2.84
PSEN1-203ENST00000394157 TRIM41Q8WV44 630 aa32.76■■■□□ 2.83
PSEN1-203ENST00000394157 SOGA1O94964 1423 aa32.75■■■□□ 2.83
PSEN1-203ENST00000394157 TARBP1Q13395 1621 aaKnown RBP32.69■■■□□ 2.82
PSEN1-203ENST00000394157 RAD54L2Q9Y4B4 1467 aa32.67■■■□□ 2.82
PSEN1-203ENST00000394157 SENP3Q9H4L4 574 aaPredicted RBP32.66■■■□□ 2.82
PSEN1-203ENST00000394157 ABCA10Q8WWZ4 1543 aa32.62■■■□□ 2.81
PSEN1-203ENST00000394157 WDR97A6NE52 1622 aa32.58■■■□□ 2.81
PSEN1-203ENST00000394157 PHF23Q9BUL5 403 aaPredicted RBP32.56■■■□□ 2.8
PSEN1-203ENST00000394157 ZNF608Q9ULD9 1512 aaPredicted RBP32.49■■■□□ 2.79
PSEN1-203ENST00000394157 TDRD9Q8NDG6 1382 aaKnown RBP32.45■■■□□ 2.78
PSEN1-203ENST00000394157 EIF4G3O43432 1585 aaKnown RBP32.43■■■□□ 2.78
PSEN1-203ENST00000394157 ABCA5Q8WWZ7 1642 aa32.41■■■□□ 2.78
PSEN1-203ENST00000394157 KIF27Q86VH2 1401 aa32.41■■■□□ 2.78
PSEN1-203ENST00000394157 AQRO60306 1485 aaKnown RBP eCLIP32.4■■■□□ 2.78
PSEN1-203ENST00000394157 GAPVD1Q14C86 1478 aa32.39■■■□□ 2.78
PSEN1-203ENST00000394157 GRIN2BQ13224 1484 aa32.32■■■□□ 2.76
PSEN1-203ENST00000394157 ERICH3Q5RHP9 1530 aa32.26■■■□□ 2.76
PSEN1-203ENST00000394157 EEA1Q15075 1411 aa32.26■■■□□ 2.75
PSEN1-203ENST00000394157 PBRM1Q86U86 1689 aa32.25■■■□□ 2.75
PSEN1-203ENST00000394157 MAGI1Q96QZ7 1491 aaPredicted RBP32.18■■■□□ 2.74
PSEN1-203ENST00000394157 RUSC2Q8N2Y8 1516 aa32.18■■■□□ 2.74
PSEN1-203ENST00000394157 IGF1RP08069 1367 aa32.17■■■□□ 2.74
PSEN1-203ENST00000394157 SNAPC4Q5SXM2 1469 aa32.13■■■□□ 2.73
PSEN1-203ENST00000394157 CUL7Q14999 1698 aa32.08■■■□□ 2.73
PSEN1-203ENST00000394157 FHAD1B1AJZ9 1412 aa32.06■■■□□ 2.72
PSEN1-203ENST00000394157 ADAMTS12P58397 1594 aa32.05■■■□□ 2.72
PSEN1-203ENST00000394157 CSRNP3Q8WYN3 585 aa32.04■■■□□ 2.72
PSEN1-203ENST00000394157 SYNJ2O15056 1496 aa32.03■■■□□ 2.72
PSEN1-203ENST00000394157 CARMIL1Q5VZK9 1371 aa31.99■■■□□ 2.71
PSEN1-203ENST00000394157 FAM9AQ8IZU1 332 aaPredicted RBP31.95■■■□□ 2.71
PSEN1-203ENST00000394157 CHMP7Q8WUX9 453 aaPredicted RBP31.95■■■□□ 2.71
PSEN1-203ENST00000394157 PRXQ9BXM0 1461 aa31.93■■■□□ 2.7
PSEN1-203ENST00000394157 GRIN2AQ12879 1464 aa31.89■■■□□ 2.7
PSEN1-203ENST00000394157 RAPGEF2Q9Y4G8 1499 aa31.89■■■□□ 2.7
PSEN1-203ENST00000394157 FBLN2P98095 1184 aa31.88■■■□□ 2.69
PSEN1-203ENST00000394157 CHD1O14646 1710 aa31.88■■■□□ 2.69
PSEN1-203ENST00000394157 KIF21BO75037 1637 aa31.82■■■□□ 2.68
PSEN1-203ENST00000394157 DNAJC5Q9H3Z4 198 aa31.81■■■□□ 2.68
PSEN1-203ENST00000394157 OSCARQ8IYS5 282 aa31.74■■■□□ 2.67
PSEN1-203ENST00000394157 NUP160Q12769 1436 aa31.73■■■□□ 2.67
Retrieved 100 of 20,778 RNA–protein pairs in 12.2 ms