RNA–Protein interactions for RNA: ENST00000398035.6

COLCA2-201, Transcript of colorectal cancer associated 2, humanhuman

TSL 1 (best) BASIC

Gene COLCA2, Length 1,414 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COLCA2-201ENST00000398035 NISCHQ9Y2I1 1504 aa45.4■■■■■ 4.86
COLCA2-201ENST00000398035 CCDC180Q9P1Z9 1646 aa40.24■■■■■ 4.03
COLCA2-201ENST00000398035 ABCC9O60706 1549 aa39.52■■■■□ 3.92
COLCA2-201ENST00000398035 DCAF8L2P0C7V8 631 aa38.14■■■■□ 3.7
COLCA2-201ENST00000398035 RB1CC1Q8TDY2 1594 aa38.01■■■■□ 3.68
COLCA2-201ENST00000398035 NACADO15069 1562 aa38■■■■□ 3.67
COLCA2-201ENST00000398035 MYO15BQ96JP2 1530 aa37.82■■■■□ 3.65
COLCA2-201ENST00000398035 ZCCHC6Q5VYS8 1495 aaKnown RBP37.77■■■■□ 3.64
COLCA2-201ENST00000398035 DCAF1Q9Y4B6 1507 aa37.6■■■■□ 3.61
COLCA2-201ENST00000398035 PABPN1Q86U42 306 aaKnown RBP eCLIP37.03■■■■□ 3.52
COLCA2-201ENST00000398035 UNC13AQ9UPW8 1703 aa36.8■■■■□ 3.48
COLCA2-201ENST00000398035 BICRAQ9NZM4 1560 aa36.75■■■■□ 3.47
COLCA2-201ENST00000398035 SCRIBQ14160 1630 aa36.69■■■■□ 3.46
COLCA2-201ENST00000398035 SHROOM4Q9ULL8 1493 aa36.57■■■■□ 3.44
COLCA2-201ENST00000398035 DNAJC5BQ9UF47 199 aa36.39■■■■□ 3.42
COLCA2-201ENST00000398035 EIF4G1Q04637 1599 aaKnown RBP35.85■■■■□ 3.33
COLCA2-201ENST00000398035 CC2D2AQ9P2K1 1620 aa35.68■■■■□ 3.3
COLCA2-201ENST00000398035 CECR2Q9BXF3 1484 aa35.58■■■■□ 3.29
COLCA2-201ENST00000398035 BAZ1AQ9NRL2 1556 aaPredicted RBP35.19■■■■□ 3.22
COLCA2-201ENST00000398035 NCAPD3P42695 1498 aa35.14■■■■□ 3.22
COLCA2-201ENST00000398035 SMARCA4P51532 1647 aa35.13■■■■□ 3.21
COLCA2-201ENST00000398035 ATAD2BQ9ULI0 1458 aa35.08■■■■□ 3.21
COLCA2-201ENST00000398035 SMARCA2P51531 1590 aa35.03■■■■□ 3.2
COLCA2-201ENST00000398035 MROH2BQ7Z745 1585 aa34.93■■■■□ 3.18
COLCA2-201ENST00000398035 PEG3Q9GZU2 1588 aa34.85■■■■□ 3.17
COLCA2-201ENST00000398035 HMGXB3Q12766 1538 aa34.84■■■■□ 3.17
COLCA2-201ENST00000398035 BAZ1BQ9UIG0 1483 aaKnown RBP34.79■■■■□ 3.16
COLCA2-201ENST00000398035 RSF1Q96T23 1441 aaPredicted RBP34.62■■■■□ 3.13
COLCA2-201ENST00000398035 WIZO95785 1651 aa34.45■■■■□ 3.11
COLCA2-201ENST00000398035 TOP2AP11388 1531 aaKnown RBP34.19■■■■□ 3.06
COLCA2-201ENST00000398035 ERCC6Q03468 1493 aa34.15■■■■□ 3.06
COLCA2-201ENST00000398035 CADPSQ9ULU8 1353 aa34.14■■■■□ 3.06
COLCA2-201ENST00000398035 NESP48681 1621 aa34.14■■■■□ 3.06
COLCA2-201ENST00000398035 LAMC3Q9Y6N6 1575 aa34.11■■■■□ 3.05
COLCA2-201ENST00000398035 PDS5BQ9NTI5 1447 aa34.03■■■■□ 3.04
COLCA2-201ENST00000398035 CFTRP13569 1480 aa33.87■■■■□ 3.01
COLCA2-201ENST00000398035 CCDC88BA6NC98 1476 aa33.85■■■■□ 3.01
COLCA2-201ENST00000398035 CUX2O14529 1486 aa33.81■■■■□ 3
COLCA2-201ENST00000398035 SUPT5HO00267 1087 aaKnown RBP33.79■■■■□ 3
COLCA2-201ENST00000398035 FANCD2Q9BXW9 1451 aa33.65■■■□□ 2.98
COLCA2-201ENST00000398035 CEP164Q9UPV0 1460 aa33.6■■■□□ 2.97
COLCA2-201ENST00000398035 KIF21AQ7Z4S6 1674 aa33.57■■■□□ 2.96
COLCA2-201ENST00000398035 MRC2Q9UBG0 1479 aa33.57■■■□□ 2.96
COLCA2-201ENST00000398035 THOC2Q8NI27 1593 aaKnown RBP33.54■■■□□ 2.96
COLCA2-201ENST00000398035 WDR62O43379 1518 aa33.39■■■□□ 2.94
COLCA2-201ENST00000398035 PRDM2Q13029 1718 aa33.25■■■□□ 2.91
COLCA2-201ENST00000398035 URB2Q14146 1524 aaKnown RBP33.25■■■□□ 2.91
COLCA2-201ENST00000398035 ABCC8Q09428 1581 aa33.21■■■□□ 2.91
COLCA2-201ENST00000398035 TOPBP1Q92547 1522 aa33.07■■■□□ 2.88
COLCA2-201ENST00000398035 DNMBPQ6XZF7 1577 aa33■■■□□ 2.87
COLCA2-201ENST00000398035 IFT140Q96RY7 1462 aa32.96■■■□□ 2.87
COLCA2-201ENST00000398035 DNAJC5Q9H3Z4 198 aa32.94■■■□□ 2.86
COLCA2-201ENST00000398035 POLA1P09884 1462 aaPredicted RBP32.8■■■□□ 2.84
COLCA2-201ENST00000398035 SOGA1O94964 1423 aa32.77■■■□□ 2.84
COLCA2-201ENST00000398035 CUX1P39880 1505 aa32.76■■■□□ 2.83
COLCA2-201ENST00000398035 ZNF608Q9ULD9 1512 aaPredicted RBP32.71■■■□□ 2.83
COLCA2-201ENST00000398035 FGD5Q6ZNL6 1462 aa32.7■■■□□ 2.83
COLCA2-201ENST00000398035 WRNQ14191 1432 aaPredicted RBP eCLIP32.67■■■□□ 2.82
COLCA2-201ENST00000398035 RAD54L2Q9Y4B4 1467 aa32.65■■■□□ 2.82
COLCA2-201ENST00000398035 TARBP1Q13395 1621 aaKnown RBP32.62■■■□□ 2.81
COLCA2-201ENST00000398035 AQRO60306 1485 aaKnown RBP eCLIP32.59■■■□□ 2.81
COLCA2-201ENST00000398035 TDRD9Q8NDG6 1382 aaKnown RBP32.57■■■□□ 2.8
COLCA2-201ENST00000398035 OSCARQ8IYS5 282 aa32.57■■■□□ 2.8
COLCA2-201ENST00000398035 EIF4G3O43432 1585 aaKnown RBP32.48■■■□□ 2.79
COLCA2-201ENST00000398035 TOP2BQ02880 1626 aa32.48■■■□□ 2.79
COLCA2-201ENST00000398035 WDR97A6NE52 1622 aa32.46■■■□□ 2.79
COLCA2-201ENST00000398035 ABCA10Q8WWZ4 1543 aa32.43■■■□□ 2.78
COLCA2-201ENST00000398035 BIVM-ERCC5R4GMW8 1640 aa32.39■■■□□ 2.78
COLCA2-201ENST00000398035 SYNJ1O43426 1573 aa32.39■■■□□ 2.78
COLCA2-201ENST00000398035 GRIN2BQ13224 1484 aa32.36■■■□□ 2.77
COLCA2-201ENST00000398035 GAPVD1Q14C86 1478 aa32.34■■■□□ 2.77
COLCA2-201ENST00000398035 FBLN2P98095 1184 aa32.34■■■□□ 2.77
COLCA2-201ENST00000398035 CHMP7Q8WUX9 453 aaPredicted RBP32.28■■■□□ 2.76
COLCA2-201ENST00000398035 MAGI1Q96QZ7 1491 aaPredicted RBP32.27■■■□□ 2.76
COLCA2-201ENST00000398035 SNAPC4Q5SXM2 1469 aa32.23■■■□□ 2.75
COLCA2-201ENST00000398035 ABCA5Q8WWZ7 1642 aa32.15■■■□□ 2.74
COLCA2-201ENST00000398035 SYNJ2O15056 1496 aa32.14■■■□□ 2.73
COLCA2-201ENST00000398035 KIF27Q86VH2 1401 aa32.04■■■□□ 2.72
COLCA2-201ENST00000398035 ERICH3Q5RHP9 1530 aa32.03■■■□□ 2.72
COLCA2-201ENST00000398035 FHAD1B1AJZ9 1412 aa32.01■■■□□ 2.71
COLCA2-201ENST00000398035 TRIM41Q8WV44 630 aa32■■■□□ 2.71
COLCA2-201ENST00000398035 PBRM1Q86U86 1689 aa32■■■□□ 2.71
COLCA2-201ENST00000398035 CHD1O14646 1710 aa31.97■■■□□ 2.71
COLCA2-201ENST00000398035 IGF1RP08069 1367 aa31.93■■■□□ 2.7
COLCA2-201ENST00000398035 GRIN2AQ12879 1464 aa31.89■■■□□ 2.7
COLCA2-201ENST00000398035 ADAMTS12P58397 1594 aa31.86■■■□□ 2.69
COLCA2-201ENST00000398035 ARHGEF11O15085 1522 aa31.79■■■□□ 2.68
COLCA2-201ENST00000398035 CLASP1Q7Z460 1538 aa31.79■■■□□ 2.68
COLCA2-201ENST00000398035 NUP160Q12769 1436 aa31.77■■■□□ 2.68
COLCA2-201ENST00000398035 CARMIL1Q5VZK9 1371 aa31.73■■■□□ 2.67
COLCA2-201ENST00000398035 RIMBP3CA6NJZ7 1639 aa31.7■■■□□ 2.67
COLCA2-201ENST00000398035 RIMBP3BA6NNM3 1639 aa31.7■■■□□ 2.67
COLCA2-201ENST00000398035 RIMBP3Q9UFD9 1639 aa31.7■■■□□ 2.67
COLCA2-201ENST00000398035 CYB5RLQ6IPT4 315 aa31.68■■■□□ 2.66
COLCA2-201ENST00000398035 CUL7Q14999 1698 aa31.64■■■□□ 2.65
COLCA2-201ENST00000398035 CEP170Q5SW79 1584 aa31.62■■■□□ 2.65
COLCA2-201ENST00000398035 JPH4Q96JJ6 628 aa31.6■■■□□ 2.65
COLCA2-201ENST00000398035 RUSC2Q8N2Y8 1516 aa31.56■■■□□ 2.64
COLCA2-201ENST00000398035 CHIC1Q5VXU3 224 aa31.52■■■□□ 2.64
COLCA2-201ENST00000398035 ARAP1Q96P48 1450 aa31.52■■■□□ 2.64
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms