RNA–Protein interactions for RNA: ENST00000369842.8

EMD-202, Transcript of emerin, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene EMD, Length 1,379 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EMD-202ENST00000369842 NISCHQ9Y2I1 1504 aa45.57■■■■■ 4.89
EMD-202ENST00000369842 CCDC180Q9P1Z9 1646 aa40.73■■■■■ 4.11
EMD-202ENST00000369842 ABCC9O60706 1549 aa40.29■■■■■ 4.04
EMD-202ENST00000369842 RB1CC1Q8TDY2 1594 aa38.56■■■■□ 3.76
EMD-202ENST00000369842 NACADO15069 1562 aa38.41■■■■□ 3.74
EMD-202ENST00000369842 DCAF8L2P0C7V8 631 aa38.16■■■■□ 3.7
EMD-202ENST00000369842 MYO15BQ96JP2 1530 aa38.07■■■■□ 3.68
EMD-202ENST00000369842 ZCCHC6Q5VYS8 1495 aaKnown RBP37.86■■■■□ 3.65
EMD-202ENST00000369842 DCAF1Q9Y4B6 1507 aa37.71■■■■□ 3.63
EMD-202ENST00000369842 UNC13AQ9UPW8 1703 aa37.68■■■■□ 3.62
EMD-202ENST00000369842 PABPN1Q86U42 306 aaKnown RBP eCLIP37.55■■■■□ 3.61e-18■■■■■ 37.4
EMD-202ENST00000369842 DNAJC5BQ9UF47 199 aa37.46■■■■□ 3.59
EMD-202ENST00000369842 BICRAQ9NZM4 1560 aa37.45■■■■□ 3.59
EMD-202ENST00000369842 SCRIBQ14160 1630 aa37.08■■■■□ 3.53
EMD-202ENST00000369842 SHROOM4Q9ULL8 1493 aa37.02■■■■□ 3.52
EMD-202ENST00000369842 EIF4G1Q04637 1599 aaKnown RBP36.47■■■■□ 3.43
EMD-202ENST00000369842 CC2D2AQ9P2K1 1620 aa36.44■■■■□ 3.42
EMD-202ENST00000369842 CECR2Q9BXF3 1484 aa36.28■■■■□ 3.4
EMD-202ENST00000369842 NCAPD3P42695 1498 aa35.47■■■■□ 3.27
EMD-202ENST00000369842 SMARCA4P51532 1647 aa35.45■■■■□ 3.27
EMD-202ENST00000369842 ATAD2BQ9ULI0 1458 aa35.4■■■■□ 3.26
EMD-202ENST00000369842 BAZ1AQ9NRL2 1556 aaPredicted RBP35.33■■■■□ 3.25
EMD-202ENST00000369842 SMARCA2P51531 1590 aa35.33■■■■□ 3.25
EMD-202ENST00000369842 HMGXB3Q12766 1538 aa35.24■■■■□ 3.23
EMD-202ENST00000369842 PEG3Q9GZU2 1588 aa35.15■■■■□ 3.22
EMD-202ENST00000369842 MROH2BQ7Z745 1585 aa35.1■■■■□ 3.21
EMD-202ENST00000369842 BAZ1BQ9UIG0 1483 aaKnown RBP35.05■■■■□ 3.2
EMD-202ENST00000369842 ERCC6Q03468 1493 aa34.75■■■■□ 3.15
EMD-202ENST00000369842 NESP48681 1621 aa34.73■■■■□ 3.15
EMD-202ENST00000369842 WIZO95785 1651 aa34.68■■■■□ 3.14
EMD-202ENST00000369842 CUX2O14529 1486 aa34.62■■■■□ 3.13
EMD-202ENST00000369842 LAMC3Q9Y6N6 1575 aa34.59■■■■□ 3.13
EMD-202ENST00000369842 RSF1Q96T23 1441 aaPredicted RBP34.52■■■■□ 3.12
EMD-202ENST00000369842 CADPSQ9ULU8 1353 aa34.38■■■■□ 3.09
EMD-202ENST00000369842 PDS5BQ9NTI5 1447 aa34.36■■■■□ 3.09
EMD-202ENST00000369842 THOC2Q8NI27 1593 aaKnown RBP34.34■■■■□ 3.09
EMD-202ENST00000369842 TOP2AP11388 1531 aaKnown RBP34.31■■■■□ 3.08
EMD-202ENST00000369842 KIF21AQ7Z4S6 1674 aa34.3■■■■□ 3.08
EMD-202ENST00000369842 DNAJC5Q9H3Z4 198 aa34.12■■■■□ 3.05
EMD-202ENST00000369842 CFTRP13569 1480 aa34.09■■■■□ 3.05
EMD-202ENST00000369842 MRC2Q9UBG0 1479 aa34.05■■■■□ 3.04
EMD-202ENST00000369842 FANCD2Q9BXW9 1451 aa33.99■■■■□ 3.03
EMD-202ENST00000369842 CEP164Q9UPV0 1460 aa33.99■■■■□ 3.03
EMD-202ENST00000369842 WDR62O43379 1518 aa33.96■■■■□ 3.03
EMD-202ENST00000369842 CCDC88BA6NC98 1476 aa33.9■■■■□ 3.02
EMD-202ENST00000369842 PRDM2Q13029 1718 aa33.76■■■■□ 3
EMD-202ENST00000369842 URB2Q14146 1524 aaKnown RBP33.69■■■□□ 2.98
EMD-202ENST00000369842 TOPBP1Q92547 1522 aa33.39■■■□□ 2.94
EMD-202ENST00000369842 ABCC8Q09428 1581 aa33.36■■■□□ 2.93
EMD-202ENST00000369842 DNMBPQ6XZF7 1577 aa33.31■■■□□ 2.92
EMD-202ENST00000369842 IFT140Q96RY7 1462 aa33.3■■■□□ 2.92
EMD-202ENST00000369842 ZNF608Q9ULD9 1512 aaPredicted RBP33.2■■■□□ 2.9
EMD-202ENST00000369842 SUPT5HO00267 1087 aaKnown RBP33.2■■■□□ 2.9
EMD-202ENST00000369842 TARBP1Q13395 1621 aaKnown RBP33.08■■■□□ 2.89
EMD-202ENST00000369842 POLA1P09884 1462 aaPredicted RBP33.08■■■□□ 2.89
EMD-202ENST00000369842 OSCARQ8IYS5 282 aa33.05■■■□□ 2.88
EMD-202ENST00000369842 EIF4G3O43432 1585 aaKnown RBP33.04■■■□□ 2.88
EMD-202ENST00000369842 CUX1P39880 1505 aa32.96■■■□□ 2.87
EMD-202ENST00000369842 AQRO60306 1485 aaKnown RBP eCLIP32.94■■■□□ 2.861e-22■■■■■ 43.7
EMD-202ENST00000369842 RAD54L2Q9Y4B4 1467 aa32.93■■■□□ 2.86
EMD-202ENST00000369842 SOGA1O94964 1423 aa32.92■■■□□ 2.86
EMD-202ENST00000369842 FGD5Q6ZNL6 1462 aa32.91■■■□□ 2.86
EMD-202ENST00000369842 WDR97A6NE52 1622 aa32.8■■■□□ 2.84
EMD-202ENST00000369842 TDRD9Q8NDG6 1382 aaKnown RBP32.79■■■□□ 2.84
EMD-202ENST00000369842 TRIM41Q8WV44 630 aa32.71■■■□□ 2.83
EMD-202ENST00000369842 CHD1O14646 1710 aa32.69■■■□□ 2.82
EMD-202ENST00000369842 SNAPC4Q5SXM2 1469 aa32.62■■■□□ 2.81
EMD-202ENST00000369842 GRIN2BQ13224 1484 aa32.61■■■□□ 2.81
EMD-202ENST00000369842 RIMBP3CA6NJZ7 1639 aa32.59■■■□□ 2.81
EMD-202ENST00000369842 RIMBP3BA6NNM3 1639 aa32.59■■■□□ 2.81
EMD-202ENST00000369842 RIMBP3Q9UFD9 1639 aa32.59■■■□□ 2.81
EMD-202ENST00000369842 ABCA10Q8WWZ4 1543 aa32.59■■■□□ 2.81
EMD-202ENST00000369842 FBLN2P98095 1184 aa32.58■■■□□ 2.81
EMD-202ENST00000369842 MAGI1Q96QZ7 1491 aaPredicted RBP32.57■■■□□ 2.81
EMD-202ENST00000369842 WRNQ14191 1432 aaPredicted RBP eCLIP32.55■■■□□ 2.8
EMD-202ENST00000369842 ARHGEF11O15085 1522 aa32.55■■■□□ 2.8
EMD-202ENST00000369842 TOP2BQ02880 1626 aa32.54■■■□□ 2.8
EMD-202ENST00000369842 BIVM-ERCC5R4GMW8 1640 aa32.54■■■□□ 2.8
EMD-202ENST00000369842 GAPVD1Q14C86 1478 aa32.53■■■□□ 2.8
EMD-202ENST00000369842 ABCA5Q8WWZ7 1642 aa32.51■■■□□ 2.79
EMD-202ENST00000369842 SYNJ1O43426 1573 aa32.5■■■□□ 2.79
EMD-202ENST00000369842 PBRM1Q86U86 1689 aa32.48■■■□□ 2.79
EMD-202ENST00000369842 SYNJ2O15056 1496 aa32.45■■■□□ 2.79
EMD-202ENST00000369842 CHMP7Q8WUX9 453 aaPredicted RBP32.44■■■□□ 2.78
EMD-202ENST00000369842 CLASP1Q7Z460 1538 aa32.38■■■□□ 2.77
EMD-202ENST00000369842 ARAP1Q96P48 1450 aa32.26■■■□□ 2.76
EMD-202ENST00000369842 CYB5RLQ6IPT4 315 aa32.23■■■□□ 2.75
EMD-202ENST00000369842 ADAMTS12P58397 1594 aa32.23■■■□□ 2.75
EMD-202ENST00000369842 ERICH3Q5RHP9 1530 aa32.19■■■□□ 2.74
EMD-202ENST00000369842 GRIN2AQ12879 1464 aa32.18■■■□□ 2.74
EMD-202ENST00000369842 FHAD1B1AJZ9 1412 aa32.15■■■□□ 2.74
EMD-202ENST00000369842 NUP160Q12769 1436 aa32.08■■■□□ 2.73
EMD-202ENST00000369842 CEP170Q5SW79 1584 aa32.05■■■□□ 2.72
EMD-202ENST00000369842 KIF27Q86VH2 1401 aa31.9■■■□□ 2.7
EMD-202ENST00000369842 SHROOM2Q13796 1616 aa31.9■■■□□ 2.7
EMD-202ENST00000369842 ERCC6L2Q5T890 1561 aa31.87■■■□□ 2.69
EMD-202ENST00000369842 IGF1RP08069 1367 aa31.87■■■□□ 2.69
EMD-202ENST00000369842 CUL7Q14999 1698 aa31.78■■■□□ 2.68
EMD-202ENST00000369842 RUSC2Q8N2Y8 1516 aa31.76■■■□□ 2.68
EMD-202ENST00000369842 TRHP20396 242 aaPredicted RBP31.71■■■□□ 2.67
Retrieved 100 of 20,778 RNA–protein pairs in 7.6 ms