RNA–Protein interactions for RNA: ENST00000599229.2

VLDLR-AS1-205, VLDLR antisense RNA 1, humanhuman

TSL 1 (best) BASIC

Gene VLDLR-AS1, Length 1,346 nt, Biotype antisense RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VLDLR-AS1-205ENST00000599229 NISCHQ9Y2I1 1504 aa45.48■■■■■ 4.87
VLDLR-AS1-205ENST00000599229 CCDC180Q9P1Z9 1646 aa40.45■■■■■ 4.07
VLDLR-AS1-205ENST00000599229 ABCC9O60706 1549 aa39.57■■■■□ 3.92
VLDLR-AS1-205ENST00000599229 RB1CC1Q8TDY2 1594 aa38.05■■■■□ 3.68
VLDLR-AS1-205ENST00000599229 DCAF8L2P0C7V8 631 aa38.03■■■■□ 3.68
VLDLR-AS1-205ENST00000599229 NACADO15069 1562 aa38.01■■■■□ 3.67
VLDLR-AS1-205ENST00000599229 ZCCHC6Q5VYS8 1495 aaKnown RBP37.88■■■■□ 3.65
VLDLR-AS1-205ENST00000599229 MYO15BQ96JP2 1530 aa37.75■■■■□ 3.63
VLDLR-AS1-205ENST00000599229 DCAF1Q9Y4B6 1507 aa37.6■■■■□ 3.61
VLDLR-AS1-205ENST00000599229 UNC13AQ9UPW8 1703 aa37.3■■■■□ 3.56
VLDLR-AS1-205ENST00000599229 PABPN1Q86U42 306 aaKnown RBP eCLIP36.97■■■■□ 3.51
VLDLR-AS1-205ENST00000599229 SCRIBQ14160 1630 aa36.93■■■■□ 3.5
VLDLR-AS1-205ENST00000599229 BICRAQ9NZM4 1560 aa36.92■■■■□ 3.5
VLDLR-AS1-205ENST00000599229 SHROOM4Q9ULL8 1493 aa36.46■■■■□ 3.43
VLDLR-AS1-205ENST00000599229 DNAJC5BQ9UF47 199 aa36.31■■■■□ 3.4
VLDLR-AS1-205ENST00000599229 EIF4G1Q04637 1599 aaKnown RBP35.93■■■■□ 3.34
VLDLR-AS1-205ENST00000599229 CC2D2AQ9P2K1 1620 aa35.8■■■■□ 3.32
VLDLR-AS1-205ENST00000599229 CECR2Q9BXF3 1484 aa35.53■■■■□ 3.28
VLDLR-AS1-205ENST00000599229 SMARCA4P51532 1647 aa35.31■■■■□ 3.24
VLDLR-AS1-205ENST00000599229 BAZ1AQ9NRL2 1556 aaPredicted RBP35.25■■■■□ 3.23
VLDLR-AS1-205ENST00000599229 ATAD2BQ9ULI0 1458 aa35.08■■■■□ 3.21
VLDLR-AS1-205ENST00000599229 MROH2BQ7Z745 1585 aa35.06■■■■□ 3.2
VLDLR-AS1-205ENST00000599229 NCAPD3P42695 1498 aa35.05■■■■□ 3.2
VLDLR-AS1-205ENST00000599229 SMARCA2P51531 1590 aa35.05■■■■□ 3.2
VLDLR-AS1-205ENST00000599229 PEG3Q9GZU2 1588 aa34.93■■■■□ 3.18
VLDLR-AS1-205ENST00000599229 HMGXB3Q12766 1538 aa34.88■■■■□ 3.17
VLDLR-AS1-205ENST00000599229 BAZ1BQ9UIG0 1483 aaKnown RBP34.8■■■■□ 3.16
VLDLR-AS1-205ENST00000599229 WIZO95785 1651 aa34.73■■■■□ 3.15
VLDLR-AS1-205ENST00000599229 RSF1Q96T23 1441 aaPredicted RBP34.65■■■■□ 3.14
VLDLR-AS1-205ENST00000599229 TOP2AP11388 1531 aaKnown RBP34.31■■■■□ 3.08
VLDLR-AS1-205ENST00000599229 NESP48681 1621 aa34.25■■■■□ 3.07
VLDLR-AS1-205ENST00000599229 LAMC3Q9Y6N6 1575 aa34.14■■■■□ 3.06
VLDLR-AS1-205ENST00000599229 ERCC6Q03468 1493 aa34.09■■■■□ 3.05
VLDLR-AS1-205ENST00000599229 CADPSQ9ULU8 1353 aa34.04■■■■□ 3.04
VLDLR-AS1-205ENST00000599229 CCDC88BA6NC98 1476 aa33.92■■■■□ 3.02
VLDLR-AS1-205ENST00000599229 PDS5BQ9NTI5 1447 aa33.91■■■■□ 3.02
VLDLR-AS1-205ENST00000599229 KIF21AQ7Z4S6 1674 aa33.89■■■■□ 3.02
VLDLR-AS1-205ENST00000599229 SUPT5HO00267 1087 aaKnown RBP33.83■■■■□ 3.01
VLDLR-AS1-205ENST00000599229 CFTRP13569 1480 aa33.83■■■■□ 3.01
VLDLR-AS1-205ENST00000599229 THOC2Q8NI27 1593 aaKnown RBP33.72■■■□□ 2.99
VLDLR-AS1-205ENST00000599229 CUX2O14529 1486 aa33.7■■■□□ 2.98
VLDLR-AS1-205ENST00000599229 PRDM2Q13029 1718 aa33.69■■■□□ 2.98
VLDLR-AS1-205ENST00000599229 FANCD2Q9BXW9 1451 aa33.65■■■□□ 2.98
VLDLR-AS1-205ENST00000599229 CEP164Q9UPV0 1460 aa33.61■■■□□ 2.97
VLDLR-AS1-205ENST00000599229 MRC2Q9UBG0 1479 aa33.56■■■□□ 2.96
VLDLR-AS1-205ENST00000599229 WDR62O43379 1518 aa33.44■■■□□ 2.94
VLDLR-AS1-205ENST00000599229 URB2Q14146 1524 aaKnown RBP33.33■■■□□ 2.93
VLDLR-AS1-205ENST00000599229 TOPBP1Q92547 1522 aa33.13■■■□□ 2.89
VLDLR-AS1-205ENST00000599229 ABCC8Q09428 1581 aa33.11■■■□□ 2.89
VLDLR-AS1-205ENST00000599229 DNMBPQ6XZF7 1577 aa33.1■■■□□ 2.89
VLDLR-AS1-205ENST00000599229 IFT140Q96RY7 1462 aa32.91■■■□□ 2.86
VLDLR-AS1-205ENST00000599229 CUX1P39880 1505 aa32.89■■■□□ 2.86
VLDLR-AS1-205ENST00000599229 POLA1P09884 1462 aaPredicted RBP32.84■■■□□ 2.85
VLDLR-AS1-205ENST00000599229 FGD5Q6ZNL6 1462 aa32.78■■■□□ 2.84
VLDLR-AS1-205ENST00000599229 ZNF608Q9ULD9 1512 aaPredicted RBP32.78■■■□□ 2.84
VLDLR-AS1-205ENST00000599229 TARBP1Q13395 1621 aaKnown RBP32.77■■■□□ 2.84
VLDLR-AS1-205ENST00000599229 RAD54L2Q9Y4B4 1467 aa32.72■■■□□ 2.83
VLDLR-AS1-205ENST00000599229 SOGA1O94964 1423 aa32.71■■■□□ 2.83
VLDLR-AS1-205ENST00000599229 WRNQ14191 1432 aaPredicted RBP eCLIP32.67■■■□□ 2.82
VLDLR-AS1-205ENST00000599229 DNAJC5Q9H3Z4 198 aa32.67■■■□□ 2.82
VLDLR-AS1-205ENST00000599229 EIF4G3O43432 1585 aaKnown RBP32.65■■■□□ 2.82
VLDLR-AS1-205ENST00000599229 BIVM-ERCC5R4GMW8 1640 aa32.63■■■□□ 2.81
VLDLR-AS1-205ENST00000599229 SYNJ1O43426 1573 aa32.62■■■□□ 2.81
VLDLR-AS1-205ENST00000599229 TOP2BQ02880 1626 aa32.62■■■□□ 2.81
VLDLR-AS1-205ENST00000599229 AQRO60306 1485 aaKnown RBP eCLIP32.6■■■□□ 2.81
VLDLR-AS1-205ENST00000599229 WDR97A6NE52 1622 aa32.53■■■□□ 2.8
VLDLR-AS1-205ENST00000599229 TDRD9Q8NDG6 1382 aaKnown RBP32.53■■■□□ 2.8
VLDLR-AS1-205ENST00000599229 ABCA10Q8WWZ4 1543 aa32.45■■■□□ 2.78
VLDLR-AS1-205ENST00000599229 ABCA5Q8WWZ7 1642 aa32.34■■■□□ 2.77
VLDLR-AS1-205ENST00000599229 GAPVD1Q14C86 1478 aa32.33■■■□□ 2.77
VLDLR-AS1-205ENST00000599229 PBRM1Q86U86 1689 aa32.33■■■□□ 2.77
VLDLR-AS1-205ENST00000599229 GRIN2BQ13224 1484 aa32.32■■■□□ 2.76
VLDLR-AS1-205ENST00000599229 OSCARQ8IYS5 282 aa32.32■■■□□ 2.76
VLDLR-AS1-205ENST00000599229 CHD1O14646 1710 aa32.3■■■□□ 2.76
VLDLR-AS1-205ENST00000599229 SNAPC4Q5SXM2 1469 aa32.28■■■□□ 2.76
VLDLR-AS1-205ENST00000599229 MAGI1Q96QZ7 1491 aaPredicted RBP32.23■■■□□ 2.75
VLDLR-AS1-205ENST00000599229 FBLN2P98095 1184 aa32.22■■■□□ 2.75
VLDLR-AS1-205ENST00000599229 CHMP7Q8WUX9 453 aaPredicted RBP32.11■■■□□ 2.73
VLDLR-AS1-205ENST00000599229 SYNJ2O15056 1496 aa32.11■■■□□ 2.73
VLDLR-AS1-205ENST00000599229 ERICH3Q5RHP9 1530 aa32.06■■■□□ 2.72
VLDLR-AS1-205ENST00000599229 ADAMTS12P58397 1594 aa32.02■■■□□ 2.72
VLDLR-AS1-205ENST00000599229 KIF27Q86VH2 1401 aa31.99■■■□□ 2.71
VLDLR-AS1-205ENST00000599229 FHAD1B1AJZ9 1412 aa31.95■■■□□ 2.71
VLDLR-AS1-205ENST00000599229 TRIM41Q8WV44 630 aa31.93■■■□□ 2.7
VLDLR-AS1-205ENST00000599229 GRIN2AQ12879 1464 aa31.91■■■□□ 2.7
VLDLR-AS1-205ENST00000599229 CLASP1Q7Z460 1538 aa31.87■■■□□ 2.69
VLDLR-AS1-205ENST00000599229 IGF1RP08069 1367 aa31.85■■■□□ 2.69
VLDLR-AS1-205ENST00000599229 RIMBP3CA6NJZ7 1639 aa31.85■■■□□ 2.69
VLDLR-AS1-205ENST00000599229 RIMBP3BA6NNM3 1639 aa31.85■■■□□ 2.69
VLDLR-AS1-205ENST00000599229 RIMBP3Q9UFD9 1639 aa31.85■■■□□ 2.69
VLDLR-AS1-205ENST00000599229 ARHGEF11O15085 1522 aa31.81■■■□□ 2.68
VLDLR-AS1-205ENST00000599229 CUL7Q14999 1698 aa31.8■■■□□ 2.68
VLDLR-AS1-205ENST00000599229 CEP170Q5SW79 1584 aa31.77■■■□□ 2.68
VLDLR-AS1-205ENST00000599229 NUP160Q12769 1436 aa31.75■■■□□ 2.67
VLDLR-AS1-205ENST00000599229 RUSC2Q8N2Y8 1516 aa31.74■■■□□ 2.67
VLDLR-AS1-205ENST00000599229 CARMIL1Q5VZK9 1371 aa31.68■■■□□ 2.66
VLDLR-AS1-205ENST00000599229 CHIC1Q5VXU3 224 aa31.57■■■□□ 2.64
VLDLR-AS1-205ENST00000599229 ARAP1Q96P48 1450 aa31.56■■■□□ 2.64
VLDLR-AS1-205ENST00000599229 SHROOM2Q13796 1616 aa31.54■■■□□ 2.64
VLDLR-AS1-205ENST00000599229 CYB5RLQ6IPT4 315 aa31.52■■■□□ 2.64
Retrieved 100 of 20,778 RNA–protein pairs in 49.9 ms