Protein–RNA interactions for Protein: Q9NRR8

CDC42SE1, CDC42 small effector protein 1, humanhuman

Predictions only

Length 79 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42SE1Q9NRR8 RUNX2-205ENST00000465038 1770 ntAPPRIS P4 TSL 5 BASIC13.46□□□□□ -0.25
CDC42SE1Q9NRR8 FADS3-201ENST00000278829 1779 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
CDC42SE1Q9NRR8 CTSA-203ENST00000372459 1972 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
CDC42SE1Q9NRR8 DYRK1B-201ENST00000323039 2535 ntAPPRIS P3 TSL 1 (best) BASIC13.45□□□□□ -0.26
CDC42SE1Q9NRR8 EPM2A-209ENST00000638262 2679 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
CDC42SE1Q9NRR8 C21orf2-202ENST00000339818 2233 ntAPPRIS P3 TSL 1 (best) BASIC13.45□□□□□ -0.26
CDC42SE1Q9NRR8 ADAP1-201ENST00000265846 2363 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
CDC42SE1Q9NRR8 ARRDC2-202ENST00000379656 2528 ntTSL 2 BASIC13.45□□□□□ -0.26
CDC42SE1Q9NRR8 ST3GAL5-268ENST00000640982 2465 ntAPPRIS ALT2 TSL 5 BASIC13.45□□□□□ -0.26
CDC42SE1Q9NRR8 KLF3-AS1-202ENST00000440181 2368 ntTSL 2 BASIC13.44□□□□□ -0.26
CDC42SE1Q9NRR8 GFOD1-204ENST00000603223 2388 ntTSL 2 BASIC13.44□□□□□ -0.26
CDC42SE1Q9NRR8 SFRP5-201ENST00000266066 1836 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
CDC42SE1Q9NRR8 COL13A1-212ENST00000520133 1833 ntTSL 5 BASIC13.44□□□□□ -0.26
CDC42SE1Q9NRR8 IRX3-201ENST00000329734 2601 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
CDC42SE1Q9NRR8 EDC4-201ENST00000358933 4800 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
CDC42SE1Q9NRR8 CAMKK1-201ENST00000158166 2459 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
CDC42SE1Q9NRR8 ARSB-201ENST00000264914 5327 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
CDC42SE1Q9NRR8 BCL7B-201ENST00000223368 1975 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
CDC42SE1Q9NRR8 MYBL1-204ENST00000522677 5192 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
CDC42SE1Q9NRR8 DTNB-201ENST00000288642 2464 ntAPPRIS ALT2 TSL 2 BASIC13.42□□□□□ -0.26
CDC42SE1Q9NRR8 DTNB-208ENST00000406818 2474 ntAPPRIS P4 TSL 1 (best) BASIC13.42□□□□□ -0.26
CDC42SE1Q9NRR8 AC109460.3-201ENST00000569969 5296 ntTSL 2 BASIC13.42□□□□□ -0.26
CDC42SE1Q9NRR8 ABHD12-201ENST00000339157 2117 ntAPPRIS P1 TSL 2 BASIC13.42□□□□□ -0.26
CDC42SE1Q9NRR8 PCSK6-215ENST00000611967 3336 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
CDC42SE1Q9NRR8 FRMD8-203ENST00000416776 1818 ntTSL 2 BASIC13.42□□□□□ -0.26
CDC42SE1Q9NRR8 TM6SF1-202ENST00000322019 2074 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
CDC42SE1Q9NRR8 ALG1L9P-201ENST00000508969 2165 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
CDC42SE1Q9NRR8 GRM6-201ENST00000231188 6143 ntAPPRIS P1 TSL 2 BASIC13.42□□□□□ -0.26
CDC42SE1Q9NRR8 DTNB-211ENST00000407661 2420 ntAPPRIS ALT1 TSL 1 (best) BASIC13.42□□□□□ -0.26
CDC42SE1Q9NRR8 SDK1-201ENST00000389531 7606 ntAPPRIS ALT2 TSL 5 BASIC13.42□□□□□ -0.26
CDC42SE1Q9NRR8 HOXA10-201ENST00000283921 2541 ntAPPRIS P2 TSL 1 (best) BASIC13.42□□□□□ -0.26
CDC42SE1Q9NRR8 IGDCC4-201ENST00000352385 6508 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
CDC42SE1Q9NRR8 CTDSPL-206ENST00000443503 4640 ntAPPRIS ALT1 TSL 1 (best) BASIC13.41□□□□□ -0.26
CDC42SE1Q9NRR8 BSPRY-201ENST00000374183 2339 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
CDC42SE1Q9NRR8 FGF19-201ENST00000294312 2447 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
CDC42SE1Q9NRR8 CAPN10-207ENST00000391984 2644 ntAPPRIS P2 TSL 1 (best) BASIC13.41□□□□□ -0.26
CDC42SE1Q9NRR8 FSD1L-208ENST00000495708 1906 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
CDC42SE1Q9NRR8 PIP5K1C-203ENST00000539785 2289 ntAPPRIS ALT2 TSL 2 BASIC13.41□□□□□ -0.26
CDC42SE1Q9NRR8 YAP1-201ENST00000282441 5386 ntAPPRIS P3 TSL 1 (best) BASIC13.4□□□□□ -0.26
CDC42SE1Q9NRR8 LACTB-201ENST00000261893 1972 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
CDC42SE1Q9NRR8 NKX2-3-201ENST00000344586 2097 ntAPPRIS P1 TSL 2 BASIC13.4□□□□□ -0.26
CDC42SE1Q9NRR8 KMT2B-201ENST00000420124 8469 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
CDC42SE1Q9NRR8 PPP1R1A-201ENST00000257905 1826 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
CDC42SE1Q9NRR8 TTC9-201ENST00000256367 5217 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
CDC42SE1Q9NRR8 ATAD3B-201ENST00000308647 2448 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
CDC42SE1Q9NRR8 NAGS-201ENST00000293404 2182 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
CDC42SE1Q9NRR8 THRA-202ENST00000394121 2260 ntTSL 2 BASIC13.39□□□□□ -0.27
CDC42SE1Q9NRR8 ATAD3A-203ENST00000378756 2492 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
CDC42SE1Q9NRR8 PTF1A-201ENST00000376504 1537 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
CDC42SE1Q9NRR8 ERMP1-202ENST00000339450 5376 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
CDC42SE1Q9NRR8 FCRLB-205ENST00000367948 1977 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
CDC42SE1Q9NRR8 DNAH9-209ENST00000579828 1986 ntTSL 2 BASIC13.39□□□□□ -0.27
CDC42SE1Q9NRR8 PARD3-202ENST00000346874 5894 ntAPPRIS ALT2 TSL 1 (best) BASIC13.39□□□□□ -0.27
CDC42SE1Q9NRR8 PARD3-203ENST00000350537 5867 ntAPPRIS ALT2 TSL 1 (best) BASIC13.39□□□□□ -0.27
CDC42SE1Q9NRR8 CYS1-201ENST00000381813 2738 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
CDC42SE1Q9NRR8 PARD3-213ENST00000545260 5740 ntAPPRIS ALT2 TSL 1 (best) BASIC13.38□□□□□ -0.27
CDC42SE1Q9NRR8 CCSAP-201ENST00000284617 5121 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
CDC42SE1Q9NRR8 GRAMD1A-201ENST00000317991 2695 ntAPPRIS P3 TSL 1 (best) BASIC13.38□□□□□ -0.27
CDC42SE1Q9NRR8 TCF24-201ENST00000563496 2450 ntAPPRIS P1 TSL 5 BASIC13.38□□□□□ -0.27
CDC42SE1Q9NRR8 AKAP17A-202ENST00000381261 2187 ntAPPRIS ALT2 TSL 1 (best) BASIC13.38□□□□□ -0.27
CDC42SE1Q9NRR8 PANK2-207ENST00000610179 1807 ntAPPRIS ALT2 TSL 1 (best) BASIC13.38□□□□□ -0.27
CDC42SE1Q9NRR8 MAP3K21-203ENST00000366624 5809 ntAPPRIS P2 TSL 1 (best) BASIC13.38□□□□□ -0.27
CDC42SE1Q9NRR8 BARHL1-201ENST00000263610 2341 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
CDC42SE1Q9NRR8 USP12-201ENST00000282344 4511 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
CDC42SE1Q9NRR8 SLC30A10-202ENST00000366926 1915 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
CDC42SE1Q9NRR8 BIN1-202ENST00000316724 2693 ntAPPRIS P4 TSL 1 (best) BASIC13.36□□□□□ -0.27
CDC42SE1Q9NRR8 FGF18-201ENST00000274625 1986 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
CDC42SE1Q9NRR8 HUNK-201ENST00000270112 7385 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
CDC42SE1Q9NRR8 PIM3-201ENST00000360612 2369 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
CDC42SE1Q9NRR8 GTPBP3-203ENST00000361619 1894 ntTSL 2 BASIC13.36□□□□□ -0.27
CDC42SE1Q9NRR8 LY6K-201ENST00000292430 2671 ntAPPRIS P3 TSL 1 (best) BASIC13.36□□□□□ -0.27
CDC42SE1Q9NRR8 ODC1-201ENST00000234111 2653 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
CDC42SE1Q9NRR8 STIM2-204ENST00000467087 5154 ntAPPRIS ALT2 TSL 1 (best) BASIC13.35□□□□□ -0.27
CDC42SE1Q9NRR8 RGS7-204ENST00000366565 2494 ntAPPRIS P3 TSL 1 (best) BASIC13.35□□□□□ -0.27
CDC42SE1Q9NRR8 NPEPL1-201ENST00000356091 2378 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
CDC42SE1Q9NRR8 TMEM158-201ENST00000503771 1813 ntAPPRIS P1 BASIC13.35□□□□□ -0.27
CDC42SE1Q9NRR8 CSNK1E-204ENST00000403904 1580 ntAPPRIS P1 TSL 5 BASIC13.35□□□□□ -0.27
CDC42SE1Q9NRR8 U2AF2-202ENST00000450554 3022 ntAPPRIS ALT1 TSL 1 (best) BASIC13.35□□□□□ -0.27
CDC42SE1Q9NRR8 RUFY1-201ENST00000319449 2646 ntAPPRIS P3 TSL 1 (best) BASIC13.35□□□□□ -0.27
CDC42SE1Q9NRR8 TMEM55B-201ENST00000250489 1961 ntAPPRIS P3 TSL 1 (best) BASIC13.34□□□□□ -0.27
CDC42SE1Q9NRR8 ST6GALNAC2-201ENST00000225276 2170 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
CDC42SE1Q9NRR8 TERF2-201ENST00000254942 2983 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
CDC42SE1Q9NRR8 NEURL4-201ENST00000315614 5182 ntAPPRIS ALT2 TSL 1 (best) BASIC13.34□□□□□ -0.27
CDC42SE1Q9NRR8 POU2F2-208ENST00000529952 1716 ntAPPRIS ALT2 TSL 1 (best) BASIC13.34□□□□□ -0.27
CDC42SE1Q9NRR8 AKT1-203ENST00000407796 2710 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
CDC42SE1Q9NRR8 RINL-202ENST00000591812 1910 ntAPPRIS ALT2 TSL 2 BASIC13.34□□□□□ -0.27
CDC42SE1Q9NRR8 NTN1-201ENST00000173229 5954 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
CDC42SE1Q9NRR8 CDIPT-201ENST00000219789 2353 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
CDC42SE1Q9NRR8 TRIM28-202ENST00000341753 2709 ntTSL 1 (best) BASIC13.33□□□□□ -0.27
CDC42SE1Q9NRR8 MAD2L2-201ENST00000235310 1860 ntAPPRIS P1 TSL 2 BASIC13.33□□□□□ -0.27
CDC42SE1Q9NRR8 ZBTB22-208ENST00000431845 2651 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
CDC42SE1Q9NRR8 ZFYVE9-201ENST00000287727 5194 ntAPPRIS P4 TSL 5 BASIC13.33□□□□□ -0.28
CDC42SE1Q9NRR8 C8orf58-206ENST00000614574 1955 ntAPPRIS ALT2 TSL 5 BASIC13.33□□□□□ -0.28
CDC42SE1Q9NRR8 SPNS1-203ENST00000334536 2027 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
CDC42SE1Q9NRR8 AMER2-202ENST00000515384 3197 ntAPPRIS P1 BASIC13.33□□□□□ -0.28
CDC42SE1Q9NRR8 COL13A1-214ENST00000522165 2061 ntAPPRIS ALT2 TSL 5 BASIC13.33□□□□□ -0.28
CDC42SE1Q9NRR8 ERGIC1-202ENST00000393784 2881 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
CDC42SE1Q9NRR8 LGR4-201ENST00000379214 5206 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
CDC42SE1Q9NRR8 RALY-201ENST00000246194 1789 ntAPPRIS P4 TSL 1 (best) BASIC13.32□□□□□ -0.28
CDC42SE1Q9NRR8 MYCN-201ENST00000281043 2602 ntAPPRIS P1 TSL 5 BASIC13.32□□□□□ -0.28
Retrieved 100 of 98,524 protein–RNA pairs in 43.9 ms