Protein–RNA interactions for Protein: Q8WWV3

RTN4IP1, Reticulon-4-interacting protein 1, mitochondrial, humanhuman

Predicted RBP Predictions only

Length 396 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTN4IP1Q8WWV3 AC012629.2-201ENST00000606513 377 ntTSL 5 BASIC21.41■■□□□ 1.02
RTN4IP1Q8WWV3 PSMG1-201ENST00000331573 2154 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
RTN4IP1Q8WWV3 C17orf97-201ENST00000360127 1839 ntAPPRIS P2 TSL 1 (best) BASIC21.41■■□□□ 1.02
RTN4IP1Q8WWV3 LYNX1-208ENST00000615007 1293 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
RTN4IP1Q8WWV3 CHML-205ENST00000638160 705 ntTSL 3 BASIC21.4■■□□□ 1.02
RTN4IP1Q8WWV3 F8A3-201ENST00000622749 1759 ntAPPRIS P1 BASIC21.4■■□□□ 1.02
RTN4IP1Q8WWV3 OSBP-201ENST00000263847 5083 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
RTN4IP1Q8WWV3 HNRNPLP2-201ENST00000568980 1570 ntBASIC21.4■■□□□ 1.02
RTN4IP1Q8WWV3 MISP3-201ENST00000269720 1424 ntAPPRIS ALT2 TSL 5 BASIC21.39■■□□□ 1.02
RTN4IP1Q8WWV3 BX255925.1-201ENST00000566954 1854 ntBASIC21.39■■□□□ 1.02
RTN4IP1Q8WWV3 ANKS1B-203ENST00000341752 2115 ntTSL 2 BASIC21.39■■□□□ 1.01
RTN4IP1Q8WWV3 S100A10-202ENST00000368811 1202 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
RTN4IP1Q8WWV3 NMB-202ENST00000394588 1017 ntTSL 1 (best) BASIC21.39■■□□□ 1.01
RTN4IP1Q8WWV3 AC012615.2-201ENST00000586259 447 ntTSL 4 BASIC21.39■■□□□ 1.01
RTN4IP1Q8WWV3 BMP8A-201ENST00000331593 1692 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
RTN4IP1Q8WWV3 RCAN1-201ENST00000313806 2490 ntTSL 1 (best) BASIC21.39■■□□□ 1.01
RTN4IP1Q8WWV3 H2AFV-205ENST00000381124 628 ntTSL 3 BASIC21.38■■□□□ 1.01
RTN4IP1Q8WWV3 EVC-203ENST00000509451 1960 ntTSL 1 (best) BASIC21.37■■□□□ 1.01
RTN4IP1Q8WWV3 PPP1CC-208ENST00000551676 1581 ntTSL 2 BASIC21.37■■□□□ 1.01
RTN4IP1Q8WWV3 STUB1-205ENST00000565677 1560 ntTSL 1 (best) BASIC21.37■■□□□ 1.01
RTN4IP1Q8WWV3 DNAJC21-201ENST00000342382 2309 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
RTN4IP1Q8WWV3 CIB1-201ENST00000328649 1247 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
RTN4IP1Q8WWV3 CIB1-202ENST00000612800 1096 ntTSL 1 (best) BASIC21.37■■□□□ 1.01
RTN4IP1Q8WWV3 LANCL3-203ENST00000614025 1469 ntTSL 2 BASIC21.37■■□□□ 1.01
RTN4IP1Q8WWV3 HDGFL1-201ENST00000510882 2174 ntAPPRIS P1 BASIC21.37■■□□□ 1.01
RTN4IP1Q8WWV3 C11orf80-218ENST00000540737 1786 ntAPPRIS ALT2 TSL 2 BASIC21.36■■□□□ 1.01
RTN4IP1Q8WWV3 SHF-207ENST00000560540 2062 ntTSL 5 BASIC21.35■■□□□ 1.01
RTN4IP1Q8WWV3 CACNG6-202ENST00000346968 645 ntTSL 5 BASIC21.35■■□□□ 1.01
RTN4IP1Q8WWV3 ECI1-203ENST00000562238 948 ntTSL 1 (best) BASIC21.35■■□□□ 1.01
RTN4IP1Q8WWV3 SLC25A6-201ENST00000381401 2062 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
RTN4IP1Q8WWV3 NXPH3-201ENST00000328741 2179 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
RTN4IP1Q8WWV3 ARTN-203ENST00000414809 1943 ntAPPRIS P4 TSL 3 BASIC21.34■■□□□ 1.01
RTN4IP1Q8WWV3 GFRA4-202ENST00000319242 900 ntAPPRIS P4 TSL 1 (best) BASIC21.34■■□□□ 1.01
RTN4IP1Q8WWV3 NMB-201ENST00000360476 1007 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
RTN4IP1Q8WWV3 VEGFA-231ENST00000640499 1188 ntAPPRIS P3 TSL 1 (best) BASIC21.34■■□□□ 1.01
RTN4IP1Q8WWV3 FRAT2-201ENST00000371019 2213 ntAPPRIS P1 BASIC21.34■■□□□ 1.01
RTN4IP1Q8WWV3 PKDCC-201ENST00000294964 2502 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
RTN4IP1Q8WWV3 PCK2-202ENST00000396973 1830 ntTSL 1 (best) BASIC21.34■■□□□ 1.01
RTN4IP1Q8WWV3 FAM220A-201ENST00000313324 2214 ntTSL 1 (best) BASIC21.33■■□□□ 1.01
RTN4IP1Q8WWV3 MNX1-207ENST00000543409 1620 ntAPPRIS ALT2 TSL 1 (best) BASIC21.33■■□□□ 1.01
RTN4IP1Q8WWV3 CPNE1-202ENST00000352393 2147 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
RTN4IP1Q8WWV3 CGGBP1-206ENST00000482016 1147 ntAPPRIS P1 TSL 2 BASIC21.33■■□□□ 1.01
RTN4IP1Q8WWV3 AC005559.1-201ENST00000589661 871 ntBASIC21.33■■□□□ 1.01
RTN4IP1Q8WWV3 MYLIP-202ENST00000356840 1666 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1
RTN4IP1Q8WWV3 SLC35A1-203ENST00000369557 1653 ntTSL 2 BASIC21.33■■□□□ 1
RTN4IP1Q8WWV3 SHOX2-201ENST00000389589 2072 ntAPPRIS P3 TSL 1 (best) BASIC21.33■■□□□ 1
RTN4IP1Q8WWV3 PROC-203ENST00000409048 1586 ntTSL 5 BASIC21.32■■□□□ 1
RTN4IP1Q8WWV3 RHOQ-201ENST00000238738 2975 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
RTN4IP1Q8WWV3 ECI1-207ENST00000570258 1512 ntAPPRIS ALT2 TSL 5 BASIC21.32■■□□□ 1
RTN4IP1Q8WWV3 TLE6-201ENST00000246112 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC21.31■■□□□ 1
RTN4IP1Q8WWV3 TNFRSF25-204ENST00000356876 1625 ntAPPRIS ALT2 TSL 1 (best) BASIC21.31■■□□□ 1
RTN4IP1Q8WWV3 NDEL1-202ENST00000380025 2181 ntTSL 5 BASIC21.31■■□□□ 1
RTN4IP1Q8WWV3 RAB3IL1-202ENST00000394836 2284 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
RTN4IP1Q8WWV3 DLG3-203ENST00000374360 5905 ntAPPRIS P2 TSL 1 (best) BASIC21.3■■□□□ 1
RTN4IP1Q8WWV3 RPS2-209ENST00000529806 993 ntTSL 3 BASIC21.3■■□□□ 1
RTN4IP1Q8WWV3 CAPNS1-217ENST00000629983 799 ntTSL 5 BASIC21.3■■□□□ 1
RTN4IP1Q8WWV3 AP004833.2-201ENST00000532228 1454 ntBASIC21.3■■□□□ 1
RTN4IP1Q8WWV3 DERA-201ENST00000428559 1705 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
RTN4IP1Q8WWV3 BATF3-201ENST00000243440 980 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
RTN4IP1Q8WWV3 SOX1-201ENST00000330949 2842 ntAPPRIS P1 BASIC21.28■■□□□ 1
RTN4IP1Q8WWV3 MXRA7-203ENST00000449428 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC21.28■■□□□ 1
RTN4IP1Q8WWV3 HDHD5-202ENST00000336737 1799 ntAPPRIS ALT2 TSL 1 (best) BASIC21.28■■□□□ 1
RTN4IP1Q8WWV3 NOXA1-201ENST00000341349 1678 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
RTN4IP1Q8WWV3 TMEM185A-207ENST00000600449 2840 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
RTN4IP1Q8WWV3 SHF-208ENST00000560734 1731 ntTSL 3 BASIC21.28■■□□□ 1
RTN4IP1Q8WWV3 RCC1L-205ENST00000618035 1409 ntTSL 1 (best) BASIC21.28■■□□□ 1
RTN4IP1Q8WWV3 FHL2-202ENST00000344213 1769 ntTSL 1 (best) BASIC21.28■■□□□ 1
RTN4IP1Q8WWV3 HNRNPAB-204ENST00000504898 1785 ntAPPRIS P4 TSL 1 (best) BASIC21.28■■□□□ 1
RTN4IP1Q8WWV3 SLC9A3R2-201ENST00000424542 2194 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
RTN4IP1Q8WWV3 REXO4-201ENST00000371935 1899 ntTSL 3 BASIC21.27■■□□□ 1
RTN4IP1Q8WWV3 SCX-201ENST00000567180 999 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
RTN4IP1Q8WWV3 TRADD-201ENST00000345057 1877 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
RTN4IP1Q8WWV3 FAH-213ENST00000561421 1549 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
RTN4IP1Q8WWV3 PGAM5-201ENST00000317555 1182 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
RTN4IP1Q8WWV3 ATP6V1E2-204ENST00000522587 1559 ntAPPRIS P1 TSL 3 BASIC21.26■□□□□ 0.99
RTN4IP1Q8WWV3 TAZ-213ENST00000601016 1889 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
RTN4IP1Q8WWV3 RNF19B-201ENST00000235150 2334 ntAPPRIS ALT2 TSL 1 (best) BASIC21.26■□□□□ 0.99
RTN4IP1Q8WWV3 RPUSD1-207ENST00000565809 1918 ntTSL 2 BASIC21.25■□□□□ 0.99
RTN4IP1Q8WWV3 AJAP1-201ENST00000378190 2383 ntAPPRIS P1 TSL 5 BASIC21.25■□□□□ 0.99
RTN4IP1Q8WWV3 GRK6-206ENST00000507633 1660 ntTSL 5 BASIC21.25■□□□□ 0.99
RTN4IP1Q8WWV3 CPTP-201ENST00000343938 2190 ntAPPRIS P1 TSL 2 BASIC21.25■□□□□ 0.99
RTN4IP1Q8WWV3 FAM185A-202ENST00000413034 1179 ntAPPRIS P4 TSL 5 BASIC21.25■□□□□ 0.99
RTN4IP1Q8WWV3 AP006261.1-201ENST00000584783 668 ntBASIC21.25■□□□□ 0.99
RTN4IP1Q8WWV3 AP000547.3-202ENST00000592107 1019 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
RTN4IP1Q8WWV3 CACNG7-203ENST00000391767 2688 ntAPPRIS P1 TSL 5 BASIC21.25■□□□□ 0.99
RTN4IP1Q8WWV3 PHF20L1-207ENST00000395379 1998 ntTSL 5 BASIC21.25■□□□□ 0.99
RTN4IP1Q8WWV3 MTMR1-202ENST00000370390 2755 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
RTN4IP1Q8WWV3 ABL2-203ENST00000392043 2140 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
RTN4IP1Q8WWV3 ANKRD65-205ENST00000537107 2190 ntAPPRIS P1 TSL 5 BASIC21.24■□□□□ 0.99
RTN4IP1Q8WWV3 DACT2-202ENST00000366796 2028 ntAPPRIS ALT2 TSL 1 (best) BASIC21.24■□□□□ 0.99
RTN4IP1Q8WWV3 TSEN34-203ENST00000396388 1349 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
RTN4IP1Q8WWV3 MPP6-203ENST00000409761 1703 ntTSL 5 BASIC21.24■□□□□ 0.99
RTN4IP1Q8WWV3 MSANTD2-203ENST00000524950 1109 ntTSL 2 BASIC21.23■□□□□ 0.99
RTN4IP1Q8WWV3 MIR3665-201ENST00000578708 105 ntBASIC21.23■□□□□ 0.99
RTN4IP1Q8WWV3 DUX4L28-201ENST00000623687 678 ntBASIC21.23■□□□□ 0.99
RTN4IP1Q8WWV3 CHPT1-201ENST00000229266 1585 ntAPPRIS P2 TSL 1 (best) BASIC21.23■□□□□ 0.99
RTN4IP1Q8WWV3 DNPEP-201ENST00000273075 2425 ntAPPRIS P3 TSL 1 (best) BASIC21.22■□□□□ 0.99
RTN4IP1Q8WWV3 TERF2-207ENST00000567296 1129 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
RTN4IP1Q8WWV3 ABHD17C-202ENST00000558464 1976 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
RTN4IP1Q8WWV3 PLBD2-202ENST00000545182 2321 ntTSL 2 BASIC21.22■□□□□ 0.99
Retrieved 100 of 98,524 protein–RNA pairs in 14.7 ms