Protein–RNA interactions for Protein: Q8TD47

RPS4Y2, 40S ribosomal protein S4, Y isoform 2, humanhuman

Predictions only

Length 263 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPS4Y2Q8TD47 C11orf80-210ENST00000527634 1666 ntAPPRIS ALT2 TSL 5 BASIC22.5■■□□□ 1.19
RPS4Y2Q8TD47 GSTP1-202ENST00000398606 965 ntAPPRIS P1 TSL 1 (best) BASIC22.5■■□□□ 1.19
RPS4Y2Q8TD47 DENR-202ENST00000455982 1052 ntTSL 5 BASIC22.5■■□□□ 1.19
RPS4Y2Q8TD47 CCDC61-204ENST00000595358 1817 ntAPPRIS P2 TSL 5 BASIC22.5■■□□□ 1.19
RPS4Y2Q8TD47 ABL2-203ENST00000392043 2140 ntTSL 1 (best) BASIC22.49■■□□□ 1.19
RPS4Y2Q8TD47 PIK3R2-207ENST00000617130 2187 ntAPPRIS P1 TSL 1 (best) BASIC22.49■■□□□ 1.19
RPS4Y2Q8TD47 AUTS2-202ENST00000403018 957 ntTSL 1 (best) BASIC22.49■■□□□ 1.19
RPS4Y2Q8TD47 KANSL2-215ENST00000553086 1830 ntTSL 5 BASIC22.49■■□□□ 1.19
RPS4Y2Q8TD47 COQ2-202ENST00000311469 1641 ntAPPRIS P2 TSL 1 (best) BASIC22.49■■□□□ 1.19
RPS4Y2Q8TD47 ANKRD65-205ENST00000537107 2190 ntAPPRIS P1 TSL 5 BASIC22.49■■□□□ 1.19
RPS4Y2Q8TD47 RPUSD1-207ENST00000565809 1918 ntTSL 2 BASIC22.49■■□□□ 1.19
RPS4Y2Q8TD47 DACT2-202ENST00000366796 2028 ntAPPRIS ALT2 TSL 1 (best) BASIC22.48■■□□□ 1.19
RPS4Y2Q8TD47 TLE6-201ENST00000246112 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC22.48■■□□□ 1.19
RPS4Y2Q8TD47 NR6A1-203ENST00000416460 1898 ntAPPRIS ALT2 TSL 1 (best) BASIC22.48■■□□□ 1.19
RPS4Y2Q8TD47 ACAA1-220ENST00000627515 1862 ntTSL 5 BASIC22.48■■□□□ 1.19
RPS4Y2Q8TD47 LY6K-203ENST00000519387 963 ntAPPRIS ALT2 TSL 2 BASIC22.48■■□□□ 1.19
RPS4Y2Q8TD47 BCAP31-207ENST00000458587 1810 ntTSL 1 (best) BASIC22.47■■□□□ 1.19
RPS4Y2Q8TD47 DUSP14-206ENST00000617516 1537 ntAPPRIS P1 TSL 1 (best) BASIC22.47■■□□□ 1.19
RPS4Y2Q8TD47 ATP6V1E2-204ENST00000522587 1559 ntAPPRIS P1 TSL 3 BASIC22.47■■□□□ 1.19
RPS4Y2Q8TD47 NKPD1-202ENST00000589776 1950 ntAPPRIS P1 BASIC22.47■■□□□ 1.19
RPS4Y2Q8TD47 TANGO2-214ENST00000447208 2086 ntTSL 3 BASIC22.47■■□□□ 1.19
RPS4Y2Q8TD47 INAFM1-201ENST00000552360 1255 ntAPPRIS P1 BASIC22.47■■□□□ 1.19
RPS4Y2Q8TD47 ITPKA-201ENST00000260386 1824 ntAPPRIS P1 TSL 1 (best) BASIC22.47■■□□□ 1.19
RPS4Y2Q8TD47 OXSR1-203ENST00000446845 1908 ntTSL 5 BASIC22.46■■□□□ 1.19
RPS4Y2Q8TD47 CHPT1-201ENST00000229266 1585 ntAPPRIS P2 TSL 1 (best) BASIC22.46■■□□□ 1.19
RPS4Y2Q8TD47 CCNYL1-203ENST00000392209 1952 ntTSL 2 BASIC22.45■■□□□ 1.18
RPS4Y2Q8TD47 FAM220A-201ENST00000313324 2214 ntTSL 1 (best) BASIC22.45■■□□□ 1.18
RPS4Y2Q8TD47 AL109917.1-201ENST00000412228 906 ntTSL 2 BASIC22.45■■□□□ 1.18
RPS4Y2Q8TD47 UBAC1-201ENST00000371756 1867 ntAPPRIS P1 TSL 1 (best) BASIC22.45■■□□□ 1.18
RPS4Y2Q8TD47 UCK1-204ENST00000372215 2167 ntAPPRIS P1 TSL 1 (best) BASIC22.45■■□□□ 1.18
RPS4Y2Q8TD47 ARMC10-205ENST00000428183 2445 ntTSL 1 (best) BASIC22.45■■□□□ 1.18
RPS4Y2Q8TD47 CIB1-201ENST00000328649 1247 ntAPPRIS P1 TSL 1 (best) BASIC22.44■■□□□ 1.18
RPS4Y2Q8TD47 CLK2-203ENST00000368361 2166 ntAPPRIS ALT1 TSL 1 (best) BASIC22.44■■□□□ 1.18
RPS4Y2Q8TD47 HSD11B1L-209ENST00000577917 1553 ntTSL 1 (best) BASIC22.44■■□□□ 1.18
RPS4Y2Q8TD47 AKAP8L-208ENST00000595465 1933 ntTSL 2 BASIC22.44■■□□□ 1.18
RPS4Y2Q8TD47 CIB1-202ENST00000612800 1096 ntTSL 1 (best) BASIC22.44■■□□□ 1.18
RPS4Y2Q8TD47 ZDHHC16-204ENST00000370842 1877 ntAPPRIS ALT1 TSL 5 BASIC22.43■■□□□ 1.18
RPS4Y2Q8TD47 RCAN1-201ENST00000313806 2490 ntTSL 1 (best) BASIC22.43■■□□□ 1.18
RPS4Y2Q8TD47 CTSA-203ENST00000372459 1972 ntTSL 1 (best) BASIC22.43■■□□□ 1.18
RPS4Y2Q8TD47 RASSF5-204ENST00000580449 1932 ntTSL 1 (best) BASIC22.42■■□□□ 1.18
RPS4Y2Q8TD47 SETD8P1-201ENST00000623146 1180 ntBASIC22.41■■□□□ 1.18
RPS4Y2Q8TD47 GSX1-201ENST00000302945 1663 ntAPPRIS P1 TSL 1 (best) BASIC22.41■■□□□ 1.18
RPS4Y2Q8TD47 AC100797.4-201ENST00000631653 1827 ntBASIC22.41■■□□□ 1.18
RPS4Y2Q8TD47 SV2B-203ENST00000545111 2099 ntTSL 2 BASIC22.4■■□□□ 1.18
RPS4Y2Q8TD47 DNAJB2-202ENST00000392086 1946 ntAPPRIS P1 TSL 2 BASIC22.39■■□□□ 1.18
RPS4Y2Q8TD47 DHRS13-201ENST00000378895 1921 ntAPPRIS P1 TSL 1 (best) BASIC22.39■■□□□ 1.17
RPS4Y2Q8TD47 TXN-202ENST00000374517 869 ntAPPRIS P1 TSL 1 (best) BASIC22.38■■□□□ 1.17
RPS4Y2Q8TD47 HOXB3-211ENST00000490677 1109 ntTSL 1 (best) BASIC22.38■■□□□ 1.17
RPS4Y2Q8TD47 TAZ-205ENST00000475699 1862 ntTSL 1 (best) BASIC22.38■■□□□ 1.17
RPS4Y2Q8TD47 TBCC-201ENST00000372876 1616 ntAPPRIS P1 BASIC22.38■■□□□ 1.17
RPS4Y2Q8TD47 AP002884.3-203ENST00000419895 1711 ntTSL 2 BASIC22.37■■□□□ 1.17
RPS4Y2Q8TD47 MXRA7-202ENST00000375036 1950 ntAPPRIS ALT2 TSL 2 BASIC22.36■■□□□ 1.17
RPS4Y2Q8TD47 AP002414.2-202ENST00000590929 1450 ntBASIC22.36■■□□□ 1.17
RPS4Y2Q8TD47 AJAP1-201ENST00000378190 2383 ntAPPRIS P1 TSL 5 BASIC22.35■■□□□ 1.17
RPS4Y2Q8TD47 EID2-201ENST00000390658 1629 ntAPPRIS P1 BASIC22.35■■□□□ 1.17
RPS4Y2Q8TD47 AL391121.1-201ENST00000607967 1349 ntBASIC22.35■■□□□ 1.17
RPS4Y2Q8TD47 TMEM266-201ENST00000388942 2520 ntAPPRIS P1 TSL 5 BASIC22.35■■□□□ 1.17
RPS4Y2Q8TD47 LDLRAD4-218ENST00000592991 1640 ntTSL 1 (best) BASIC22.35■■□□□ 1.17
RPS4Y2Q8TD47 ZNF639-209ENST00000496856 2033 ntAPPRIS P1 TSL 1 (best) BASIC22.35■■□□□ 1.17
RPS4Y2Q8TD47 FSD1-201ENST00000221856 1831 ntAPPRIS P1 TSL 1 (best) BASIC22.34■■□□□ 1.17
RPS4Y2Q8TD47 AKAP17A-202ENST00000381261 2187 ntAPPRIS ALT2 TSL 1 (best) BASIC22.34■■□□□ 1.17
RPS4Y2Q8TD47 ARTN-204ENST00000438616 889 ntTSL 1 (best) BASIC22.34■■□□□ 1.17
RPS4Y2Q8TD47 AC012615.2-201ENST00000586259 447 ntTSL 4 BASIC22.34■■□□□ 1.17
RPS4Y2Q8TD47 POU3F3-201ENST00000361360 3064 ntAPPRIS P1 BASIC22.33■■□□□ 1.17
RPS4Y2Q8TD47 EBPL-202ENST00000378268 680 ntTSL 3 BASIC22.33■■□□□ 1.17
RPS4Y2Q8TD47 SLC12A2-202ENST00000343225 5509 ntAPPRIS ALT2 TSL 1 (best) BASIC22.32■■□□□ 1.16
RPS4Y2Q8TD47 TPGS1-201ENST00000359315 1114 ntAPPRIS P1 TSL 1 (best) BASIC22.32■■□□□ 1.16
RPS4Y2Q8TD47 PLBD2-202ENST00000545182 2321 ntTSL 2 BASIC22.32■■□□□ 1.16
RPS4Y2Q8TD47 PKM-203ENST00000389093 2279 ntTSL 5 BASIC22.32■■□□□ 1.16
RPS4Y2Q8TD47 RFLNA-205ENST00000546355 2354 ntAPPRIS ALT1 TSL 1 (best) BASIC22.32■■□□□ 1.16
RPS4Y2Q8TD47 PIP4K2B-204ENST00000619039 5734 ntAPPRIS P1 TSL 1 (best) BASIC22.31■■□□□ 1.16
RPS4Y2Q8TD47 INPP4A-203ENST00000409463 1565 ntTSL 1 (best) BASIC22.31■■□□□ 1.16
RPS4Y2Q8TD47 NMB-202ENST00000394588 1017 ntTSL 1 (best) BASIC22.31■■□□□ 1.16
RPS4Y2Q8TD47 NPC2-207ENST00000555619 1035 ntAPPRIS P2 TSL 1 (best) BASIC22.31■■□□□ 1.16
RPS4Y2Q8TD47 FGF19-201ENST00000294312 2447 ntAPPRIS P1 TSL 1 (best) BASIC22.31■■□□□ 1.16
RPS4Y2Q8TD47 DEDD-212ENST00000545495 2329 ntAPPRIS P1 TSL 3 BASIC22.3■■□□□ 1.16
RPS4Y2Q8TD47 FGF3-201ENST00000334134 892 ntAPPRIS P1 TSL 1 (best) BASIC22.3■■□□□ 1.16
RPS4Y2Q8TD47 AC097358.2-201ENST00000607541 1159 ntBASIC22.3■■□□□ 1.16
RPS4Y2Q8TD47 CACNG7-203ENST00000391767 2688 ntAPPRIS P1 TSL 5 BASIC22.3■■□□□ 1.16
RPS4Y2Q8TD47 QDPR-201ENST00000281243 1648 ntAPPRIS P1 TSL 1 (best) BASIC22.29■■□□□ 1.16
RPS4Y2Q8TD47 MSANTD2-201ENST00000239614 2495 ntTSL 2 BASIC22.29■■□□□ 1.16
RPS4Y2Q8TD47 MARCH2-202ENST00000381035 1192 ntTSL 5 BASIC22.29■■□□□ 1.16
RPS4Y2Q8TD47 AC068152.1-210ENST00000574741 836 ntTSL 3 BASIC22.29■■□□□ 1.16
RPS4Y2Q8TD47 CAHM-201ENST00000604200 896 ntBASIC22.29■■□□□ 1.16
RPS4Y2Q8TD47 CFAP99-207ENST00000635017 2298 ntTSL 5 BASIC22.29■■□□□ 1.16
RPS4Y2Q8TD47 FAM66E-202ENST00000533615 2087 ntTSL 2 BASIC22.29■■□□□ 1.16
RPS4Y2Q8TD47 BARX1-201ENST00000253968 1533 ntAPPRIS P1 TSL 1 (best) BASIC22.28■■□□□ 1.16
RPS4Y2Q8TD47 MZT2B-202ENST00000409255 769 ntAPPRIS ALT2 TSL 5 BASIC22.28■■□□□ 1.16
RPS4Y2Q8TD47 UNCX-201ENST00000316333 2048 ntAPPRIS P1 TSL 1 (best) BASIC22.27■■□□□ 1.16
RPS4Y2Q8TD47 MTMR1-202ENST00000370390 2755 ntAPPRIS P1 TSL 1 (best) BASIC22.27■■□□□ 1.16
RPS4Y2Q8TD47 RUNX2-203ENST00000371436 1588 ntAPPRIS ALT2 TSL 5 BASIC22.27■■□□□ 1.16
RPS4Y2Q8TD47 UBALD2-203ENST00000589240 660 ntTSL 2 BASIC22.27■■□□□ 1.16
RPS4Y2Q8TD47 PKDCC-201ENST00000294964 2502 ntAPPRIS P1 TSL 1 (best) BASIC22.27■■□□□ 1.16
RPS4Y2Q8TD47 ZNF692-201ENST00000306601 1931 ntAPPRIS P3 TSL 1 (best) BASIC22.27■■□□□ 1.16
RPS4Y2Q8TD47 GPS1-204ENST00000392358 2276 ntTSL 1 (best) BASIC22.26■■□□□ 1.15
RPS4Y2Q8TD47 VEGFA-231ENST00000640499 1188 ntAPPRIS P3 TSL 1 (best) BASIC22.26■■□□□ 1.15
RPS4Y2Q8TD47 CCDC136-206ENST00000464832 1720 ntAPPRIS ALT2 TSL 5 BASIC22.26■■□□□ 1.15
RPS4Y2Q8TD47 OTUD5-202ENST00000376488 2692 ntAPPRIS ALT1 TSL 1 (best) BASIC22.25■■□□□ 1.15
RPS4Y2Q8TD47 CIB2-201ENST00000258930 1598 ntAPPRIS P1 TSL 1 (best) BASIC22.25■■□□□ 1.15
RPS4Y2Q8TD47 SLC35D2-201ENST00000253270 1613 ntAPPRIS P1 TSL 1 (best) BASIC22.25■■□□□ 1.15
Retrieved 100 of 98,524 protein–RNA pairs in 68.5 ms