Protein–RNA interactions for Protein: Q8N196

SIX5, Homeobox protein SIX5, humanhuman

Predictions only

Length 739 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SIX5Q8N196 HOXD-AS2-201ENST00000426965 927 ntTSL 1 (best) BASIC26.54■■□□□ 1.84
SIX5Q8N196 ATOH7-201ENST00000373673 1480 ntAPPRIS P1 BASIC26.54■■□□□ 1.84
SIX5Q8N196 CHST11-203ENST00000547956 936 ntTSL 2 BASIC26.53■■□□□ 1.84
SIX5Q8N196 EBAG9-202ENST00000395785 1467 ntAPPRIS P1 TSL 1 (best) BASIC26.53■■□□□ 1.84
SIX5Q8N196 FMR1-219ENST00000621453 1864 ntTSL 1 (best) BASIC26.53■■□□□ 1.84
SIX5Q8N196 ADAT3-201ENST00000329478 1620 ntAPPRIS P1 TSL 1 (best) BASIC26.52■■□□□ 1.84
SIX5Q8N196 IGFBPL1-201ENST00000377694 1093 ntAPPRIS P1 TSL 2 BASIC26.52■■□□□ 1.84
SIX5Q8N196 BTBD19-201ENST00000409335 1214 ntTSL 5 BASIC26.52■■□□□ 1.84
SIX5Q8N196 ARL8A-204ENST00000614750 1727 ntTSL 3 BASIC26.52■■□□□ 1.84
SIX5Q8N196 MSX1-201ENST00000382723 1939 ntAPPRIS P1 TSL 1 (best) BASIC26.51■■□□□ 1.83
SIX5Q8N196 C20orf24-203ENST00000373852 1059 ntTSL 1 (best) BASIC26.51■■□□□ 1.83
SIX5Q8N196 CCDC37-AS1-202ENST00000506660 986 ntTSL 1 (best) BASIC26.51■■□□□ 1.83
SIX5Q8N196 AC060814.1-201ENST00000554326 538 ntBASIC26.51■■□□□ 1.83
SIX5Q8N196 AL161658.1-201ENST00000623641 1967 ntBASIC26.51■■□□□ 1.83
SIX5Q8N196 TSPAN3-203ENST00000424443 1530 ntTSL 2 BASIC26.5■■□□□ 1.83
SIX5Q8N196 AC010864.1-201ENST00000609407 1511 ntBASIC26.5■■□□□ 1.83
SIX5Q8N196 PMS1-220ENST00000618056 1468 ntTSL 5 BASIC26.5■■□□□ 1.83
SIX5Q8N196 MZT2B-201ENST00000281871 933 ntAPPRIS P3 TSL 1 (best) BASIC26.5■■□□□ 1.83
SIX5Q8N196 MZT2A-201ENST00000309451 624 ntAPPRIS P1 TSL 1 (best) BASIC26.5■■□□□ 1.83
SIX5Q8N196 ABHD17A-202ENST00000292577 1757 ntAPPRIS P1 TSL 1 (best) BASIC26.5■■□□□ 1.83
SIX5Q8N196 CTSZ-201ENST00000217131 1495 ntAPPRIS P1 TSL 1 (best) BASIC26.49■■□□□ 1.83
SIX5Q8N196 C7orf50-202ENST00000397098 2131 ntAPPRIS P2 TSL 1 (best) BASIC26.49■■□□□ 1.83
SIX5Q8N196 AC004987.1-201ENST00000428627 508 ntBASIC26.49■■□□□ 1.83
SIX5Q8N196 FGF13-AS1-202ENST00000446383 584 ntTSL 3 BASIC26.49■■□□□ 1.83
SIX5Q8N196 HES7-202ENST00000541682 1674 ntAPPRIS ALT1 TSL 1 (best) BASIC26.49■■□□□ 1.83
SIX5Q8N196 CHST12-204ENST00000618655 2131 ntAPPRIS P1 TSL 1 (best) BASIC26.48■■□□□ 1.83
SIX5Q8N196 ADRA1D-201ENST00000379453 2728 ntAPPRIS P1 TSL 1 (best) BASIC26.48■■□□□ 1.83
SIX5Q8N196 KRT18P60-201ENST00000312876 1297 ntBASIC26.48■■□□□ 1.83
SIX5Q8N196 RARRES2P1-201ENST00000474487 481 ntBASIC26.48■■□□□ 1.83
SIX5Q8N196 NIT1-201ENST00000368007 1749 ntTSL 2 BASIC26.48■■□□□ 1.83
SIX5Q8N196 ATP5G2P3-201ENST00000429083 425 ntBASIC26.47■■□□□ 1.83
SIX5Q8N196 SH3GLB2-201ENST00000372554 1985 ntTSL 1 (best) BASIC26.47■■□□□ 1.83
SIX5Q8N196 UCK1-201ENST00000372208 2063 ntTSL 1 (best) BASIC26.46■■□□□ 1.83
SIX5Q8N196 STUB1-205ENST00000565677 1560 ntTSL 1 (best) BASIC26.46■■□□□ 1.83
SIX5Q8N196 GAL3ST1-204ENST00000402369 1712 ntAPPRIS P1 TSL 3 BASIC26.46■■□□□ 1.83
SIX5Q8N196 UPF3A-209ENST00000492270 494 ntTSL 2 BASIC26.46■■□□□ 1.83
SIX5Q8N196 FSD1L-204ENST00000469022 1836 ntTSL 1 (best) BASIC26.46■■□□□ 1.83
SIX5Q8N196 PRRX2-201ENST00000372469 1311 ntAPPRIS P1 TSL 1 (best) BASIC26.45■■□□□ 1.83
SIX5Q8N196 YBX2-201ENST00000007699 1590 ntAPPRIS P1 TSL 1 (best) BASIC26.45■■□□□ 1.82
SIX5Q8N196 TMEM55B-202ENST00000398020 1696 ntAPPRIS ALT1 TSL 1 (best) BASIC26.44■■□□□ 1.82
SIX5Q8N196 GUK1-208ENST00000366728 842 ntTSL 2 BASIC26.44■■□□□ 1.82
SIX5Q8N196 DSG2-202ENST00000585206 1081 ntTSL 2 BASIC26.44■■□□□ 1.82
SIX5Q8N196 MCCD1-201ENST00000376191 955 ntAPPRIS P1 TSL 1 (best) BASIC26.43■■□□□ 1.82
SIX5Q8N196 TTC39C-209ENST00000584250 1048 ntTSL 1 (best) BASIC26.43■■□□□ 1.82
SIX5Q8N196 RAB4B-203ENST00000594800 1173 ntAPPRIS P1 TSL 5 BASIC26.43■■□□□ 1.82
SIX5Q8N196 SAP25-204ENST00000622764 1031 ntAPPRIS ALT2 TSL 5 BASIC26.43■■□□□ 1.82
SIX5Q8N196 PLEKHJ1-204ENST00000586608 935 ntTSL 3 BASIC26.42■■□□□ 1.82
SIX5Q8N196 TBX2-AS1-202ENST00000589814 539 ntTSL 3 BASIC26.42■■□□□ 1.82
SIX5Q8N196 GKAP1-203ENST00000376371 1778 ntAPPRIS P1 TSL 1 (best) BASIC26.42■■□□□ 1.82
SIX5Q8N196 EIF5A-202ENST00000336458 1511 ntAPPRIS P1 TSL 1 (best) BASIC26.41■■□□□ 1.82
SIX5Q8N196 GSX2-202ENST00000503800 1181 ntTSL 5 BASIC26.41■■□□□ 1.82
SIX5Q8N196 AC138207.2-201ENST00000583377 492 ntTSL 2 BASIC26.41■■□□□ 1.82
SIX5Q8N196 HOMER3-207ENST00000594794 903 ntTSL 5 BASIC26.41■■□□□ 1.82
SIX5Q8N196 PI4KAP1-202ENST00000611748 1906 ntTSL 1 (best) BASIC26.4■■□□□ 1.82
SIX5Q8N196 ENDOG-201ENST00000372642 1172 ntAPPRIS P1 TSL 1 (best) BASIC26.4■■□□□ 1.82
SIX5Q8N196 ZMYND19-201ENST00000298585 1375 ntAPPRIS P1 TSL 1 (best) BASIC26.4■■□□□ 1.82
SIX5Q8N196 LACTBL1-202ENST00000618559 1500 ntAPPRIS ALT2 TSL 5 BASIC26.39■■□□□ 1.82
SIX5Q8N196 C9orf50-201ENST00000372478 1620 ntAPPRIS P2 TSL 2 BASIC26.39■■□□□ 1.82
SIX5Q8N196 MSRB2-201ENST00000376510 1803 ntAPPRIS P1 TSL 1 (best) BASIC26.39■■□□□ 1.82
SIX5Q8N196 ENKD1-201ENST00000243878 1579 ntAPPRIS P1 TSL 1 (best) BASIC26.39■■□□□ 1.82
SIX5Q8N196 KCTD15-206ENST00000588881 1211 ntAPPRIS P1 TSL 2 BASIC26.39■■□□□ 1.82
SIX5Q8N196 WHAMMP2-203ENST00000563942 1603 ntBASIC26.39■■□□□ 1.81
SIX5Q8N196 LYSMD2-202ENST00000454181 1228 ntTSL 1 (best) BASIC26.38■■□□□ 1.81
SIX5Q8N196 PLEKHF2-202ENST00000519516 1144 ntAPPRIS P1 TSL 3 BASIC26.38■■□□□ 1.81
SIX5Q8N196 AC148477.6-201ENST00000623746 465 ntBASIC26.38■■□□□ 1.81
SIX5Q8N196 PELI3-203ENST00000524466 1671 ntTSL 1 (best) BASIC26.38■■□□□ 1.81
SIX5Q8N196 COQ2-202ENST00000311469 1641 ntAPPRIS P2 TSL 1 (best) BASIC26.37■■□□□ 1.81
SIX5Q8N196 AC110285.7-201ENST00000624417 1536 ntBASIC26.36■■□□□ 1.81
SIX5Q8N196 RASSF7-202ENST00000397583 1928 ntAPPRIS P3 TSL 1 (best) BASIC26.36■■□□□ 1.81
SIX5Q8N196 AC135983.2-203ENST00000454486 1613 ntBASIC26.36■■□□□ 1.81
SIX5Q8N196 SLC9A3-AS1-207ENST00000607286 1357 ntTSL 5 BASIC26.35■■□□□ 1.81
SIX5Q8N196 EPB41L4A-AS2-201ENST00000623705 1396 ntBASIC26.35■■□□□ 1.81
SIX5Q8N196 KLF16-204ENST00000617223 1133 ntAPPRIS P1 TSL 1 (best) BASIC26.35■■□□□ 1.81
SIX5Q8N196 MLST8-203ENST00000397124 1691 ntAPPRIS P3 TSL 5 BASIC26.34■■□□□ 1.81
SIX5Q8N196 AC092296.2-201ENST00000589470 999 ntBASIC26.34■■□□□ 1.81
SIX5Q8N196 GPR137-202ENST00000377702 1478 ntTSL 1 (best) BASIC26.34■■□□□ 1.81
SIX5Q8N196 TOMM40-201ENST00000252487 1707 ntAPPRIS P2 TSL 1 (best) BASIC26.34■■□□□ 1.81
SIX5Q8N196 TOMM40-202ENST00000405636 1709 ntAPPRIS P2 TSL 1 (best) BASIC26.34■■□□□ 1.81
SIX5Q8N196 C16orf59-202ENST00000483320 1709 ntAPPRIS ALT2 TSL 2 BASIC26.34■■□□□ 1.81
SIX5Q8N196 OXLD1-201ENST00000374741 620 ntAPPRIS P1 TSL 1 (best) BASIC26.33■■□□□ 1.81
SIX5Q8N196 HSD11B1L-202ENST00000339423 1660 ntAPPRIS P3 TSL 1 (best) BASIC26.33■■□□□ 1.81
SIX5Q8N196 PPP1R14A-201ENST00000301242 777 ntAPPRIS P1 TSL 1 (best) BASIC26.32■■□□□ 1.8
SIX5Q8N196 GNAS-AS1_1.1-201ENST00000621898 103 ntBASIC26.32■■□□□ 1.8
SIX5Q8N196 AC127502.1-201ENST00000399971 1502 ntBASIC26.32■■□□□ 1.8
SIX5Q8N196 SHC2-201ENST00000264554 2494 ntAPPRIS P1 TSL 1 (best) BASIC26.32■■□□□ 1.8
SIX5Q8N196 MMP28-203ENST00000612672 1092 ntTSL 1 (best) BASIC26.31■■□□□ 1.8
SIX5Q8N196 MTCP1-202ENST00000369476 2274 ntAPPRIS P1 TSL 3 BASIC26.31■■□□□ 1.8
SIX5Q8N196 OPRD1-202ENST00000621425 1217 ntTSL 1 (best) BASIC26.3■■□□□ 1.8
SIX5Q8N196 CDC34-201ENST00000215574 1471 ntAPPRIS P1 TSL 1 (best) BASIC26.3■■□□□ 1.8
SIX5Q8N196 PSMG4-207ENST00000451246 824 ntTSL 3 BASIC26.29■■□□□ 1.8
SIX5Q8N196 HOXB3-210ENST00000489475 1845 ntTSL 2 BASIC26.29■■□□□ 1.8
SIX5Q8N196 MIR219A2-201ENST00000608502 1504 ntBASIC26.29■■□□□ 1.8
SIX5Q8N196 OLFM2-201ENST00000264833 2019 ntAPPRIS P1 TSL 1 (best) BASIC26.28■■□□□ 1.8
SIX5Q8N196 ECEL1P2-201ENST00000461596 1295 ntBASIC26.28■■□□□ 1.8
SIX5Q8N196 GNG10-201ENST00000374293 1491 ntAPPRIS P1 TSL 1 (best) BASIC26.28■■□□□ 1.8
SIX5Q8N196 GAL3ST3-203ENST00000527878 1599 ntAPPRIS P1 TSL 1 (best) BASIC26.28■■□□□ 1.8
SIX5Q8N196 TNFRSF12A-201ENST00000326577 1033 ntAPPRIS P1 TSL 1 (best) BASIC26.27■■□□□ 1.8
SIX5Q8N196 IFI30-201ENST00000407280 1134 ntAPPRIS P1 TSL 1 (best) BASIC26.27■■□□□ 1.8
SIX5Q8N196 HES4-204ENST00000484667 667 ntTSL 3 BASIC26.27■■□□□ 1.8
SIX5Q8N196 FOXO6-202ENST00000641094 1476 ntAPPRIS P1 BASIC26.27■■□□□ 1.8
Retrieved 100 of 98,524 protein–RNA pairs in 121.8 ms