Protein–RNA interactions for Protein: Q7L0R7

RNF44, RING finger protein 44, humanhuman

Predictions only

Length 432 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF44Q7L0R7 KIAA2013-202ENST00000376576 2539 ntTSL 2 BASIC24.62■■□□□ 1.53
RNF44Q7L0R7 C2orf88-204ENST00000409870 1441 ntAPPRIS P1 TSL 2 BASIC24.61■■□□□ 1.53
RNF44Q7L0R7 ZDHHC16-201ENST00000345745 1519 ntTSL 1 (best) BASIC24.61■■□□□ 1.53
RNF44Q7L0R7 ITPKA-201ENST00000260386 1824 ntAPPRIS P1 TSL 1 (best) BASIC24.61■■□□□ 1.53
RNF44Q7L0R7 AL139393.2-201ENST00000608721 2025 ntBASIC24.61■■□□□ 1.53
RNF44Q7L0R7 FGFRL1-205ENST00000510644 2304 ntAPPRIS P1 TSL 1 (best) BASIC24.61■■□□□ 1.53
RNF44Q7L0R7 RHOC-202ENST00000339083 1418 ntAPPRIS P1 TSL 1 (best) BASIC24.61■■□□□ 1.53
RNF44Q7L0R7 AGPS-202ENST00000409888 815 ntTSL 4 BASIC24.6■■□□□ 1.53
RNF44Q7L0R7 CLEC3B-202ENST00000428034 752 ntTSL 2 BASIC24.6■■□□□ 1.53
RNF44Q7L0R7 DUX4L13-201ENST00000554103 1267 ntBASIC24.6■■□□□ 1.53
RNF44Q7L0R7 DUX4L15-201ENST00000611059 1267 ntBASIC24.6■■□□□ 1.53
RNF44Q7L0R7 DUX4L23-201ENST00000615195 1269 ntBASIC24.6■■□□□ 1.53
RNF44Q7L0R7 DUX4L24-201ENST00000617576 1269 ntBASIC24.6■■□□□ 1.53
RNF44Q7L0R7 DUX4L22-201ENST00000618238 1269 ntBASIC24.6■■□□□ 1.53
RNF44Q7L0R7 DUX4L20-201ENST00000619712 1269 ntBASIC24.6■■□□□ 1.53
RNF44Q7L0R7 DUX4L21-201ENST00000622058 1269 ntBASIC24.6■■□□□ 1.53
RNF44Q7L0R7 DUX4L10-201ENST00000622460 1267 ntBASIC24.6■■□□□ 1.53
RNF44Q7L0R7 DUX4L25-201ENST00000624915 1269 ntBASIC24.6■■□□□ 1.53
RNF44Q7L0R7 SP8-201ENST00000361443 1714 ntAPPRIS P3 TSL 1 (best) BASIC24.6■■□□□ 1.53
RNF44Q7L0R7 FAM149A-201ENST00000227065 2708 ntAPPRIS P2 TSL 1 (best) BASIC24.6■■□□□ 1.53
RNF44Q7L0R7 NKX2-1-204ENST00000522719 1417 ntAPPRIS P1 TSL 1 (best) BASIC24.6■■□□□ 1.53
RNF44Q7L0R7 TRIM52-AS1-203ENST00000509252 529 ntTSL 3 BASIC24.59■■□□□ 1.53
RNF44Q7L0R7 CHML-204ENST00000638121 920 ntTSL 2 BASIC24.59■■□□□ 1.53
RNF44Q7L0R7 EID2-201ENST00000390658 1629 ntAPPRIS P1 BASIC24.59■■□□□ 1.53
RNF44Q7L0R7 MKRN1-202ENST00000443720 1601 ntAPPRIS ALT2 TSL 1 (best) BASIC24.58■■□□□ 1.53
RNF44Q7L0R7 RASL10A-202ENST00000401450 1720 ntTSL 2 BASIC24.58■■□□□ 1.52
RNF44Q7L0R7 SLC35D2-201ENST00000253270 1613 ntAPPRIS P1 TSL 1 (best) BASIC24.57■■□□□ 1.52
RNF44Q7L0R7 SLC35D2-203ENST00000375259 1361 ntTSL 1 (best) BASIC24.57■■□□□ 1.52
RNF44Q7L0R7 EBPL-201ENST00000242827 914 ntAPPRIS P1 TSL 1 (best) BASIC24.57■■□□□ 1.52
RNF44Q7L0R7 CR559946.2-201ENST00000623684 991 ntBASIC24.57■■□□□ 1.52
RNF44Q7L0R7 RUNX2-203ENST00000371436 1588 ntAPPRIS ALT2 TSL 5 BASIC24.57■■□□□ 1.52
RNF44Q7L0R7 INPP4A-203ENST00000409463 1565 ntTSL 1 (best) BASIC24.57■■□□□ 1.52
RNF44Q7L0R7 RRAD-202ENST00000420652 1476 ntAPPRIS P1 TSL 1 (best) BASIC24.57■■□□□ 1.52
RNF44Q7L0R7 MAPK8IP1P1-201ENST00000574657 1439 ntBASIC24.56■■□□□ 1.52
RNF44Q7L0R7 AURKAIP1-203ENST00000338370 1072 ntAPPRIS P1 TSL 1 (best) BASIC24.56■■□□□ 1.52
RNF44Q7L0R7 AGFG1-205ENST00000409979 2089 ntAPPRIS ALT1 TSL 5 BASIC24.56■■□□□ 1.52
RNF44Q7L0R7 BCL3-201ENST00000164227 2038 ntAPPRIS P1 TSL 1 (best) BASIC24.56■■□□□ 1.52
RNF44Q7L0R7 GADD45G-201ENST00000252506 1065 ntAPPRIS P1 TSL 1 (best) BASIC24.55■■□□□ 1.52
RNF44Q7L0R7 MIR3648-2-201ENST00000581792 180 ntBASIC24.55■■□□□ 1.52
RNF44Q7L0R7 MIR3648-1-201ENST00000615959 180 ntBASIC24.55■■□□□ 1.52
RNF44Q7L0R7 MEST-211ENST00000437945 1455 ntTSL 5 BASIC24.55■■□□□ 1.52
RNF44Q7L0R7 NGB-201ENST00000298352 1884 ntAPPRIS P1 TSL 1 (best) BASIC24.55■■□□□ 1.52
RNF44Q7L0R7 CUEDC1-201ENST00000360238 2193 ntAPPRIS P1 TSL 2 BASIC24.54■■□□□ 1.52
RNF44Q7L0R7 RNF130-205ENST00000521389 2263 ntAPPRIS P1 TSL 1 (best) BASIC24.54■■□□□ 1.52
RNF44Q7L0R7 HSD17B1-201ENST00000225929 1265 ntAPPRIS ALT2 TSL 2 BASIC24.54■■□□□ 1.52
RNF44Q7L0R7 ING2-201ENST00000302327 1189 ntAPPRIS P1 TSL 1 (best) BASIC24.54■■□□□ 1.52
RNF44Q7L0R7 GSX2-202ENST00000503800 1181 ntTSL 5 BASIC24.54■■□□□ 1.52
RNF44Q7L0R7 GDI1-215ENST00000630693 786 ntTSL 4 BASIC24.54■■□□□ 1.52
RNF44Q7L0R7 MAZ-205ENST00000562337 1574 ntTSL 3 BASIC24.54■■□□□ 1.52
RNF44Q7L0R7 CAAP1-205ENST00000520187 773 ntTSL 5 BASIC24.53■■□□□ 1.52
RNF44Q7L0R7 P2RX2-203ENST00000350048 1344 ntTSL 1 (best) BASIC24.53■■□□□ 1.52
RNF44Q7L0R7 RCC1L-202ENST00000614461 2419 ntTSL 1 (best) BASIC24.53■■□□□ 1.52
RNF44Q7L0R7 SIGMAR1-203ENST00000378892 1743 ntTSL 2 BASIC24.52■■□□□ 1.52
RNF44Q7L0R7 CIB2-201ENST00000258930 1598 ntAPPRIS P1 TSL 1 (best) BASIC24.52■■□□□ 1.52
RNF44Q7L0R7 RANBP1-202ENST00000402752 1132 ntAPPRIS ALT1 TSL 1 (best) BASIC24.52■■□□□ 1.52
RNF44Q7L0R7 WNT5A-AS1-201ENST00000469484 500 ntTSL 3 BASIC24.52■■□□□ 1.52
RNF44Q7L0R7 SLC16A8-201ENST00000320521 1878 ntAPPRIS P1 TSL 1 (best) BASIC24.51■■□□□ 1.51
RNF44Q7L0R7 PPP1CC-208ENST00000551676 1581 ntTSL 2 BASIC24.51■■□□□ 1.51
RNF44Q7L0R7 PHF20L1-207ENST00000395379 1998 ntTSL 5 BASIC24.51■■□□□ 1.51
RNF44Q7L0R7 EIF5A-202ENST00000336458 1511 ntAPPRIS P1 TSL 1 (best) BASIC24.51■■□□□ 1.51
RNF44Q7L0R7 ANKRD16-201ENST00000191063 1567 ntTSL 3 BASIC24.5■■□□□ 1.51
RNF44Q7L0R7 MPP6-203ENST00000409761 1703 ntTSL 5 BASIC24.49■■□□□ 1.51
RNF44Q7L0R7 AC016575.1-201ENST00000607026 382 ntBASIC24.49■■□□□ 1.51
RNF44Q7L0R7 ZFAND2B-208ENST00000409594 2021 ntTSL 2 BASIC24.49■■□□□ 1.51
RNF44Q7L0R7 ACOT12-204ENST00000513751 612 ntTSL 1 (best) BASIC24.48■■□□□ 1.51
RNF44Q7L0R7 FHL2-202ENST00000344213 1769 ntTSL 1 (best) BASIC24.47■■□□□ 1.51
RNF44Q7L0R7 MAGI2-215ENST00000628980 6212 ntTSL 5 BASIC24.47■■□□□ 1.51
RNF44Q7L0R7 ZNF470-206ENST00000601902 1640 ntTSL 1 (best) BASIC24.46■■□□□ 1.51
RNF44Q7L0R7 RTN2-201ENST00000245923 2293 ntTSL 1 (best) BASIC24.46■■□□□ 1.51
RNF44Q7L0R7 WDSUB1-205ENST00000409990 1920 ntAPPRIS P1 TSL 2 BASIC24.46■■□□□ 1.51
RNF44Q7L0R7 HES6-205ENST00000409356 528 ntTSL 2 BASIC24.46■■□□□ 1.51
RNF44Q7L0R7 HLA-V-202ENST00000446817 847 ntBASIC24.46■■□□□ 1.51
RNF44Q7L0R7 CAPNS1-211ENST00000590874 926 ntTSL 5 BASIC24.46■■□□□ 1.51
RNF44Q7L0R7 RPUSD1-208ENST00000567114 1835 ntTSL 2 BASIC24.46■■□□□ 1.51
RNF44Q7L0R7 MATK-201ENST00000310132 2133 ntAPPRIS ALT2 TSL 1 (best) BASIC24.46■■□□□ 1.51
RNF44Q7L0R7 FKBP1A-205ENST00000439640 1583 ntTSL 3 BASIC24.46■■□□□ 1.51
RNF44Q7L0R7 EFNA1-202ENST00000368407 1926 ntAPPRIS P1 TSL 1 (best) BASIC24.45■■□□□ 1.51
RNF44Q7L0R7 TMEM147-202ENST00000392204 935 ntTSL 2 BASIC24.45■■□□□ 1.5
RNF44Q7L0R7 AL118558.1-203ENST00000553701 447 ntTSL 3 BASIC24.45■■□□□ 1.5
RNF44Q7L0R7 MBP-237ENST00000579129 1052 ntTSL 5 BASIC24.45■■□□□ 1.5
RNF44Q7L0R7 DNPEP-201ENST00000273075 2425 ntAPPRIS P3 TSL 1 (best) BASIC24.45■■□□□ 1.5
RNF44Q7L0R7 ESRRA-201ENST00000000442 2215 ntAPPRIS P3 TSL 1 (best) BASIC24.45■■□□□ 1.5
RNF44Q7L0R7 CCZ1B-215ENST00000626257 2211 ntTSL 2 BASIC24.45■■□□□ 1.5
RNF44Q7L0R7 KRT18-201ENST00000388835 1562 ntAPPRIS P1 TSL 1 (best) BASIC24.44■■□□□ 1.5
RNF44Q7L0R7 AC027237.3-202ENST00000558617 1778 ntTSL 2 BASIC24.44■■□□□ 1.5
RNF44Q7L0R7 MYCL-202ENST00000372816 1688 ntAPPRIS P3 TSL 2 BASIC24.43■■□□□ 1.5
RNF44Q7L0R7 AC100797.4-201ENST00000631653 1827 ntBASIC24.43■■□□□ 1.5
RNF44Q7L0R7 MTCH1-202ENST00000373627 2057 ntAPPRIS P1 TSL 1 (best) BASIC24.43■■□□□ 1.5
RNF44Q7L0R7 RPS2-202ENST00000526522 924 ntTSL 2 BASIC24.43■■□□□ 1.5
RNF44Q7L0R7 F8A3-201ENST00000622749 1759 ntAPPRIS P1 BASIC24.43■■□□□ 1.5
RNF44Q7L0R7 ABCB10P3-201ENST00000561950 2166 ntBASIC24.43■■□□□ 1.5
RNF44Q7L0R7 SPATA5L1-208ENST00000638607 1863 ntTSL 2 BASIC24.43■■□□□ 1.5
RNF44Q7L0R7 LDLRAD4-218ENST00000592991 1640 ntTSL 1 (best) BASIC24.43■■□□□ 1.5
RNF44Q7L0R7 OVOL2-201ENST00000278780 1555 ntAPPRIS P1 TSL 1 (best) BASIC24.42■■□□□ 1.5
RNF44Q7L0R7 RP9-201ENST00000297157 1121 ntAPPRIS P2 TSL 1 (best) BASIC24.42■■□□□ 1.5
RNF44Q7L0R7 MIR639-201ENST00000384974 98 ntBASIC24.42■■□□□ 1.5
RNF44Q7L0R7 SLC30A10-202ENST00000366926 1915 ntAPPRIS P1 TSL 1 (best) BASIC24.41■■□□□ 1.5
RNF44Q7L0R7 ATP8B2-201ENST00000368487 1523 ntTSL 1 (best) BASIC24.41■■□□□ 1.5
RNF44Q7L0R7 AC110285.7-201ENST00000624417 1536 ntBASIC24.41■■□□□ 1.5
RNF44Q7L0R7 CHST11-202ENST00000546689 756 ntTSL 2 BASIC24.41■■□□□ 1.5
Retrieved 100 of 98,524 protein–RNA pairs in 10.8 ms