Protein–RNA interactions for Protein: Q6NUI1

CCDC144NL, Putative coiled-coil domain-containing protein 144 N-terminal-like, humanhuman

Predictions only

Length 221 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC144NLQ6NUI1 ZDHHC16-201ENST00000345745 1519 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
CCDC144NLQ6NUI1 C16orf59-202ENST00000483320 1709 ntAPPRIS ALT2 TSL 2 BASIC20.75■□□□□ 0.91
CCDC144NLQ6NUI1 RTN2-201ENST00000245923 2293 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
CCDC144NLQ6NUI1 ITPKA-201ENST00000260386 1824 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
CCDC144NLQ6NUI1 WHRN-203ENST00000374057 1718 ntTSL 2 BASIC20.75■□□□□ 0.91
CCDC144NLQ6NUI1 MEST-211ENST00000437945 1455 ntTSL 5 BASIC20.75■□□□□ 0.91
CCDC144NLQ6NUI1 HOXD13-201ENST00000392539 2240 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
CCDC144NLQ6NUI1 CIB2-201ENST00000258930 1598 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
CCDC144NLQ6NUI1 DDN-AS1-203ENST00000552284 934 ntTSL 3 BASIC20.74■□□□□ 0.91
CCDC144NLQ6NUI1 ABCB10P3-201ENST00000561950 2166 ntBASIC20.74■□□□□ 0.91
CCDC144NLQ6NUI1 TPRA1-209ENST00000489960 1903 ntAPPRIS P1 TSL 5 BASIC20.74■□□□□ 0.91
CCDC144NLQ6NUI1 MKRN1-202ENST00000443720 1601 ntAPPRIS ALT2 TSL 1 (best) BASIC20.74■□□□□ 0.91
CCDC144NLQ6NUI1 CCZ1B-215ENST00000626257 2211 ntTSL 2 BASIC20.73■□□□□ 0.91
CCDC144NLQ6NUI1 SLC30A10-202ENST00000366926 1915 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
CCDC144NLQ6NUI1 MATK-201ENST00000310132 2133 ntAPPRIS ALT2 TSL 1 (best) BASIC20.73■□□□□ 0.91
CCDC144NLQ6NUI1 FKBP1A-210ENST00000614856 562 ntTSL 2 BASIC20.73■□□□□ 0.91
CCDC144NLQ6NUI1 RCC1L-202ENST00000614461 2419 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
CCDC144NLQ6NUI1 EID2-201ENST00000390658 1629 ntAPPRIS P1 BASIC20.72■□□□□ 0.91
CCDC144NLQ6NUI1 WDSUB1-205ENST00000409990 1920 ntAPPRIS P1 TSL 2 BASIC20.72■□□□□ 0.91
CCDC144NLQ6NUI1 INPP4A-203ENST00000409463 1565 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
CCDC144NLQ6NUI1 MTCH1-202ENST00000373627 2057 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
CCDC144NLQ6NUI1 MAPK8IP1P1-201ENST00000574657 1439 ntBASIC20.71■□□□□ 0.91
CCDC144NLQ6NUI1 HSD11B1L-202ENST00000339423 1660 ntAPPRIS P3 TSL 1 (best) BASIC20.71■□□□□ 0.91
CCDC144NLQ6NUI1 AP000251.1-201ENST00000433071 822 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
CCDC144NLQ6NUI1 PPP1CC-208ENST00000551676 1581 ntTSL 2 BASIC20.71■□□□□ 0.91
CCDC144NLQ6NUI1 WHAMMP2-203ENST00000563942 1603 ntBASIC20.71■□□□□ 0.91
CCDC144NLQ6NUI1 F8A3-201ENST00000622749 1759 ntAPPRIS P1 BASIC20.7■□□□□ 0.9
CCDC144NLQ6NUI1 MAZ-205ENST00000562337 1574 ntTSL 3 BASIC20.69■□□□□ 0.9
CCDC144NLQ6NUI1 HS3ST6-201ENST00000454677 1273 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
CCDC144NLQ6NUI1 C11orf95-204ENST00000546282 390 ntTSL 3 BASIC20.69■□□□□ 0.9
CCDC144NLQ6NUI1 PCYT2-203ENST00000538936 5147 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
CCDC144NLQ6NUI1 SPATA5L1-208ENST00000638607 1863 ntTSL 2 BASIC20.68■□□□□ 0.9
CCDC144NLQ6NUI1 PHF20L1-207ENST00000395379 1998 ntTSL 5 BASIC20.68■□□□□ 0.9
CCDC144NLQ6NUI1 C2orf88-204ENST00000409870 1441 ntAPPRIS P1 TSL 2 BASIC20.68■□□□□ 0.9
CCDC144NLQ6NUI1 MARCKSL1-201ENST00000329421 1699 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
CCDC144NLQ6NUI1 RASL10A-202ENST00000401450 1720 ntTSL 2 BASIC20.67■□□□□ 0.9
CCDC144NLQ6NUI1 MAPK13-201ENST00000211287 2052 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
CCDC144NLQ6NUI1 AGPS-202ENST00000409888 815 ntTSL 4 BASIC20.67■□□□□ 0.9
CCDC144NLQ6NUI1 TNFSF12-201ENST00000293825 1553 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
CCDC144NLQ6NUI1 SLC35A1-203ENST00000369557 1653 ntTSL 2 BASIC20.67■□□□□ 0.9
CCDC144NLQ6NUI1 FHL2-202ENST00000344213 1769 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
CCDC144NLQ6NUI1 NXNL1-201ENST00000301944 946 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
CCDC144NLQ6NUI1 TRIM52-AS1-203ENST00000509252 529 ntTSL 3 BASIC20.66■□□□□ 0.9
CCDC144NLQ6NUI1 PDCD2-209ENST00000542896 1082 ntTSL 2 BASIC20.66■□□□□ 0.9
CCDC144NLQ6NUI1 DUX4L11-201ENST00000611504 1267 ntBASIC20.66■□□□□ 0.9
CCDC144NLQ6NUI1 DUX4L12-201ENST00000614593 1267 ntBASIC20.66■□□□□ 0.9
CCDC144NLQ6NUI1 DUX4L14-201ENST00000621227 1267 ntBASIC20.66■□□□□ 0.9
CCDC144NLQ6NUI1 RPUSD1-208ENST00000567114 1835 ntTSL 2 BASIC20.66■□□□□ 0.9
CCDC144NLQ6NUI1 ZFAND2B-208ENST00000409594 2021 ntTSL 2 BASIC20.65■□□□□ 0.9
CCDC144NLQ6NUI1 SLC16A8-201ENST00000320521 1878 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
CCDC144NLQ6NUI1 AURKAIP1-203ENST00000338370 1072 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
CCDC144NLQ6NUI1 C5orf66-AS1-201ENST00000507035 843 ntTSL 2 BASIC20.65■□□□□ 0.9
CCDC144NLQ6NUI1 MIR7108-201ENST00000614319 87 ntBASIC20.65■□□□□ 0.9
CCDC144NLQ6NUI1 MPP6-203ENST00000409761 1703 ntTSL 5 BASIC20.64■□□□□ 0.9
CCDC144NLQ6NUI1 MYCL-202ENST00000372816 1688 ntAPPRIS P3 TSL 2 BASIC20.64■□□□□ 0.89
CCDC144NLQ6NUI1 TNFRSF25-205ENST00000377782 1632 ntAPPRIS P4 TSL 1 (best) BASIC20.64■□□□□ 0.89
CCDC144NLQ6NUI1 EIF5A-202ENST00000336458 1511 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
CCDC144NLQ6NUI1 COL13A1-214ENST00000522165 2061 ntAPPRIS ALT2 TSL 5 BASIC20.63■□□□□ 0.89
CCDC144NLQ6NUI1 TMEM268-201ENST00000288502 2314 ntAPPRIS P3 TSL 1 (best) BASIC20.63■□□□□ 0.89
CCDC144NLQ6NUI1 FKBP1A-205ENST00000439640 1583 ntTSL 3 BASIC20.63■□□□□ 0.89
CCDC144NLQ6NUI1 AC231981.1-201ENST00000450917 974 ntTSL 3 BASIC20.62■□□□□ 0.89
CCDC144NLQ6NUI1 DUX4L13-201ENST00000554103 1267 ntBASIC20.62■□□□□ 0.89
CCDC144NLQ6NUI1 DUX4L15-201ENST00000611059 1267 ntBASIC20.62■□□□□ 0.89
CCDC144NLQ6NUI1 DUX4L23-201ENST00000615195 1269 ntBASIC20.62■□□□□ 0.89
CCDC144NLQ6NUI1 DUX4L24-201ENST00000617576 1269 ntBASIC20.62■□□□□ 0.89
CCDC144NLQ6NUI1 DUX4L22-201ENST00000618238 1269 ntBASIC20.62■□□□□ 0.89
CCDC144NLQ6NUI1 DUX4L20-201ENST00000619712 1269 ntBASIC20.62■□□□□ 0.89
CCDC144NLQ6NUI1 DUX4L21-201ENST00000622058 1269 ntBASIC20.62■□□□□ 0.89
CCDC144NLQ6NUI1 DUX4L10-201ENST00000622460 1267 ntBASIC20.62■□□□□ 0.89
CCDC144NLQ6NUI1 DUX4L25-201ENST00000624915 1269 ntBASIC20.62■□□□□ 0.89
CCDC144NLQ6NUI1 CHML-204ENST00000638121 920 ntTSL 2 BASIC20.62■□□□□ 0.89
CCDC144NLQ6NUI1 ANKRD16-201ENST00000191063 1567 ntTSL 3 BASIC20.62■□□□□ 0.89
CCDC144NLQ6NUI1 RTN4R-201ENST00000043402 2157 ntAPPRIS P2 TSL 1 (best) BASIC20.62■□□□□ 0.89
CCDC144NLQ6NUI1 RNF166-209ENST00000567844 633 ntTSL 5 BASIC20.61■□□□□ 0.89
CCDC144NLQ6NUI1 HMCES-202ENST00000389735 1763 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
CCDC144NLQ6NUI1 SHARPIN-202ENST00000398712 1765 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
CCDC144NLQ6NUI1 ZFPM1-201ENST00000319555 5380 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
CCDC144NLQ6NUI1 VWA1-201ENST00000338660 2147 ntTSL 2 BASIC20.6■□□□□ 0.89
CCDC144NLQ6NUI1 ZNF470-206ENST00000601902 1640 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
CCDC144NLQ6NUI1 CLEC3B-202ENST00000428034 752 ntTSL 2 BASIC20.6■□□□□ 0.89
CCDC144NLQ6NUI1 AC013394.1-201ENST00000629685 808 ntAPPRIS P1 TSL 5 BASIC20.6■□□□□ 0.89
CCDC144NLQ6NUI1 TPRA1-202ENST00000355552 1933 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
CCDC144NLQ6NUI1 FEV-201ENST00000295727 1879 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
CCDC144NLQ6NUI1 SECTM1-201ENST00000269389 2235 ntAPPRIS P2 TSL 1 (best) BASIC20.59■□□□□ 0.89
CCDC144NLQ6NUI1 TMEM147-202ENST00000392204 935 ntTSL 2 BASIC20.59■□□□□ 0.89
CCDC144NLQ6NUI1 MACF1-219ENST00000484793 834 ntTSL 2 BASIC20.59■□□□□ 0.89
CCDC144NLQ6NUI1 AC100797.4-201ENST00000631653 1827 ntBASIC20.59■□□□□ 0.89
CCDC144NLQ6NUI1 DERA-201ENST00000428559 1705 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
CCDC144NLQ6NUI1 CHST14-202ENST00000559991 1968 ntTSL 5 BASIC20.58■□□□□ 0.89
CCDC144NLQ6NUI1 EBPL-201ENST00000242827 914 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
CCDC144NLQ6NUI1 GSX2-202ENST00000503800 1181 ntTSL 5 BASIC20.58■□□□□ 0.89
CCDC144NLQ6NUI1 EFNA1-202ENST00000368407 1926 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
CCDC144NLQ6NUI1 P2RX2-203ENST00000350048 1344 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
CCDC144NLQ6NUI1 RRAD-202ENST00000420652 1476 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
CCDC144NLQ6NUI1 GSR-206ENST00000546342 1482 ntAPPRIS ALT2 TSL 1 (best) BASIC20.57■□□□□ 0.88
CCDC144NLQ6NUI1 TPI1-201ENST00000229270 1763 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
CCDC144NLQ6NUI1 BIN1-204ENST00000348750 2074 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
CCDC144NLQ6NUI1 RUNX2-203ENST00000371436 1588 ntAPPRIS ALT2 TSL 5 BASIC20.57■□□□□ 0.88
CCDC144NLQ6NUI1 AC187653.1-201ENST00000506382 702 ntAPPRIS P1 TSL 5 BASIC20.57■□□□□ 0.88
CCDC144NLQ6NUI1 DNPEP-201ENST00000273075 2425 ntAPPRIS P3 TSL 1 (best) BASIC20.57■□□□□ 0.88
Retrieved 100 of 98,524 protein–RNA pairs in 42.6 ms