Protein–RNA interactions for Protein: P58876

HIST1H2BD, Histone H2B type 1-D, humanhuman

Predictions only

Length 126 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HIST1H2BDP58876 PPP1CC-202ENST00000340766 1472 ntTSL 2 BASIC19.66■□□□□ 0.74
HIST1H2BDP58876 NKX2-3-201ENST00000344586 2097 ntAPPRIS P1 TSL 2 BASIC19.66■□□□□ 0.74
HIST1H2BDP58876 GRK4-204ENST00000503518 2136 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
HIST1H2BDP58876 CCZ1B-201ENST00000316731 2885 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
HIST1H2BDP58876 ATAD3B-201ENST00000308647 2448 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
HIST1H2BDP58876 PCYT2-203ENST00000538936 5147 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
HIST1H2BDP58876 BMP6-201ENST00000283147 2780 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
HIST1H2BDP58876 FSD1-201ENST00000221856 1831 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
HIST1H2BDP58876 TADA2B-201ENST00000310074 4350 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
HIST1H2BDP58876 ZDHHC16-204ENST00000370842 1877 ntAPPRIS ALT1 TSL 5 BASIC19.65■□□□□ 0.74
HIST1H2BDP58876 PMS1-205ENST00000409985 1882 ntTSL 2 BASIC19.65■□□□□ 0.74
HIST1H2BDP58876 AKAP8L-208ENST00000595465 1933 ntTSL 2 BASIC19.64■□□□□ 0.74
HIST1H2BDP58876 EBF4-210ENST00000609451 2012 ntAPPRIS ALT1 TSL 5 BASIC19.64■□□□□ 0.74
HIST1H2BDP58876 HNRNPL-201ENST00000221419 2471 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.74
HIST1H2BDP58876 ARRDC2-202ENST00000379656 2528 ntTSL 2 BASIC19.64■□□□□ 0.74
HIST1H2BDP58876 CEBPB-AS1-201ENST00000613921 2648 ntTSL 3 BASIC19.64■□□□□ 0.73
HIST1H2BDP58876 KCNMA1-283ENST00000640523 5425 ntAPPRIS ALT2 TSL 5 BASIC19.64■□□□□ 0.73
HIST1H2BDP58876 THRA-202ENST00000394121 2260 ntTSL 2 BASIC19.63■□□□□ 0.73
HIST1H2BDP58876 GTPBP3-203ENST00000361619 1894 ntTSL 2 BASIC19.63■□□□□ 0.73
HIST1H2BDP58876 AC091060.1-201ENST00000623524 1766 ntBASIC19.63■□□□□ 0.73
HIST1H2BDP58876 AL135925.1-201ENST00000605920 1701 ntBASIC19.63■□□□□ 0.73
HIST1H2BDP58876 FTCD-201ENST00000291670 1905 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
HIST1H2BDP58876 USP25-203ENST00000351097 2158 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
HIST1H2BDP58876 CAPN12-212ENST00000601953 2381 ntTSL 5 BASIC19.62■□□□□ 0.73
HIST1H2BDP58876 ERGIC1-202ENST00000393784 2881 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
HIST1H2BDP58876 CDK9-201ENST00000373264 2463 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
HIST1H2BDP58876 ATAD3A-203ENST00000378756 2492 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
HIST1H2BDP58876 GDF1-201ENST00000247005 2517 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
HIST1H2BDP58876 CERS1-204ENST00000623882 2517 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
HIST1H2BDP58876 AC133561.1-201ENST00000568600 2415 ntBASIC19.59■□□□□ 0.73
HIST1H2BDP58876 IRF2BP1-201ENST00000302165 2564 ntAPPRIS P1 BASIC19.58■□□□□ 0.73
HIST1H2BDP58876 TOP1MT-208ENST00000519148 1868 ntTSL 2 BASIC19.58■□□□□ 0.72
HIST1H2BDP58876 ZFAND2B-208ENST00000409594 2021 ntTSL 2 BASIC19.58■□□□□ 0.72
HIST1H2BDP58876 C21orf2-202ENST00000339818 2233 ntAPPRIS P3 TSL 1 (best) BASIC19.57■□□□□ 0.72
HIST1H2BDP58876 PDS5A-202ENST00000503396 2685 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
HIST1H2BDP58876 BTBD7-205ENST00000554565 2697 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
HIST1H2BDP58876 SHOX2-201ENST00000389589 2072 ntAPPRIS P3 TSL 1 (best) BASIC19.56■□□□□ 0.72
HIST1H2BDP58876 CCDC154-201ENST00000389176 2212 ntAPPRIS P5 TSL 5 BASIC19.56■□□□□ 0.72
HIST1H2BDP58876 QKI-207ENST00000453779 5685 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
HIST1H2BDP58876 ZC3H14-202ENST00000302216 2560 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
HIST1H2BDP58876 NPEPL1-201ENST00000356091 2378 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
HIST1H2BDP58876 NRG1-210ENST00000520407 1955 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
HIST1H2BDP58876 LRRC61-202ENST00000359623 1877 ntAPPRIS P1 TSL 2 BASIC19.55■□□□□ 0.72
HIST1H2BDP58876 AZIN2-201ENST00000294517 2182 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
HIST1H2BDP58876 SP5-201ENST00000375281 2033 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
HIST1H2BDP58876 ARRDC1-201ENST00000371421 1586 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
HIST1H2BDP58876 DGAT2-201ENST00000228027 2453 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
HIST1H2BDP58876 POU2F2-215ENST00000560398 1788 ntTSL 5 BASIC19.54■□□□□ 0.72
HIST1H2BDP58876 FZD8-201ENST00000374694 4030 ntAPPRIS P1 BASIC19.53■□□□□ 0.72
HIST1H2BDP58876 ATF4-201ENST00000337304 2019 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
HIST1H2BDP58876 HDHD5-202ENST00000336737 1799 ntAPPRIS ALT2 TSL 1 (best) BASIC19.52■□□□□ 0.72
HIST1H2BDP58876 AL136373.1-201ENST00000634804 1449 ntAPPRIS P1 BASIC19.52■□□□□ 0.72
HIST1H2BDP58876 MSX1-201ENST00000382723 1939 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
HIST1H2BDP58876 ST3GAL5-268ENST00000640982 2465 ntAPPRIS ALT2 TSL 5 BASIC19.52■□□□□ 0.72
HIST1H2BDP58876 NR6A1-203ENST00000416460 1898 ntAPPRIS ALT2 TSL 1 (best) BASIC19.52■□□□□ 0.71
HIST1H2BDP58876 ALG2-203ENST00000476832 1880 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.71
HIST1H2BDP58876 EGR4-201ENST00000436467 2377 ntAPPRIS ALT2 TSL 1 (best) BASIC19.51■□□□□ 0.71
HIST1H2BDP58876 TCF3-203ENST00000395423 2779 ntTSL 5 BASIC19.51■□□□□ 0.71
HIST1H2BDP58876 ATPAF1-202ENST00000371937 1827 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
HIST1H2BDP58876 HAGHL-204ENST00000549114 1820 ntTSL 5 BASIC19.51■□□□□ 0.71
HIST1H2BDP58876 PTH1R-201ENST00000313049 2123 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
HIST1H2BDP58876 HAS1-205ENST00000601714 2086 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
HIST1H2BDP58876 CLDND1-202ENST00000394180 2228 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
HIST1H2BDP58876 CDH23-208ENST00000461841 2000 ntTSL 5 BASIC19.51■□□□□ 0.71
HIST1H2BDP58876 VRK2-202ENST00000412104 1916 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
HIST1H2BDP58876 CNIH2-203ENST00000528852 1524 ntAPPRIS ALT1 TSL 1 (best) BASIC19.51■□□□□ 0.71
HIST1H2BDP58876 HOMER2-202ENST00000450735 1950 ntAPPRIS ALT2 TSL 1 (best) BASIC19.5■□□□□ 0.71
HIST1H2BDP58876 SSSCA1-205ENST00000527920 806 ntTSL 3 BASIC19.5■□□□□ 0.71
HIST1H2BDP58876 FJX1-201ENST00000317811 2450 ntAPPRIS P1 BASIC19.5■□□□□ 0.71
HIST1H2BDP58876 SYNDIG1-201ENST00000376862 2522 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
HIST1H2BDP58876 CAPN10-207ENST00000391984 2644 ntAPPRIS P2 TSL 1 (best) BASIC19.49■□□□□ 0.71
HIST1H2BDP58876 ID4-201ENST00000378700 2344 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
HIST1H2BDP58876 DYRK2-203ENST00000393555 2209 ntAPPRIS ALT1 TSL 1 (best) BASIC19.49■□□□□ 0.71
HIST1H2BDP58876 RDX-210ENST00000530301 1549 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
HIST1H2BDP58876 NDEL1-201ENST00000334527 2372 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
HIST1H2BDP58876 REXO4-201ENST00000371935 1899 ntTSL 3 BASIC19.48■□□□□ 0.71
HIST1H2BDP58876 HABP4-202ENST00000375251 2304 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
HIST1H2BDP58876 GIT1-210ENST00000579937 2798 ntTSL 2 BASIC19.48■□□□□ 0.71
HIST1H2BDP58876 THRA-201ENST00000264637 2538 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
HIST1H2BDP58876 C11orf80-218ENST00000540737 1786 ntAPPRIS ALT2 TSL 2 BASIC19.47■□□□□ 0.71
HIST1H2BDP58876 BSPRY-201ENST00000374183 2339 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
HIST1H2BDP58876 LSR-204ENST00000361790 2210 ntAPPRIS P4 TSL 1 (best) BASIC19.47■□□□□ 0.71
HIST1H2BDP58876 RIOX1-201ENST00000304061 2429 ntAPPRIS P1 BASIC19.47■□□□□ 0.71
HIST1H2BDP58876 RUNX2-203ENST00000371436 1588 ntAPPRIS ALT2 TSL 5 BASIC19.47■□□□□ 0.71
HIST1H2BDP58876 ACAA1-220ENST00000627515 1862 ntTSL 5 BASIC19.47■□□□□ 0.71
HIST1H2BDP58876 AP2M1-202ENST00000382456 2091 ntAPPRIS ALT1 TSL 1 (best) BASIC19.47■□□□□ 0.71
HIST1H2BDP58876 SRR-201ENST00000344595 2728 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
HIST1H2BDP58876 DAZAP1-202ENST00000336761 2290 ntTSL 5 BASIC19.46■□□□□ 0.71
HIST1H2BDP58876 LINC01578-209ENST00000557682 2683 ntTSL 2 BASIC19.46■□□□□ 0.71
HIST1H2BDP58876 GFOD1-204ENST00000603223 2388 ntTSL 2 BASIC19.46■□□□□ 0.71
HIST1H2BDP58876 HTRA1-201ENST00000368984 2120 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
HIST1H2BDP58876 RUNX2-205ENST00000465038 1770 ntAPPRIS P4 TSL 5 BASIC19.45■□□□□ 0.7
HIST1H2BDP58876 TAF5L-202ENST00000366674 492 ntTSL 3 BASIC19.45■□□□□ 0.7
HIST1H2BDP58876 KAT8-206ENST00000543774 1846 ntAPPRIS P1 TSL 5 BASIC19.45■□□□□ 0.7
HIST1H2BDP58876 SRSF11-203ENST00000370951 2385 ntAPPRIS ALT2 TSL 1 (best) BASIC19.45■□□□□ 0.7
HIST1H2BDP58876 OPN3-201ENST00000366554 2620 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
HIST1H2BDP58876 RAX-201ENST00000256852 2935 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
HIST1H2BDP58876 CHST14-202ENST00000559991 1968 ntTSL 5 BASIC19.44■□□□□ 0.7
HIST1H2BDP58876 AC145676.1-201ENST00000514988 2004 ntBASIC19.44■□□□□ 0.7
HIST1H2BDP58876 LINC00543-201ENST00000567234 1845 ntBASIC19.44■□□□□ 0.7
Retrieved 100 of 98,524 protein–RNA pairs in 26.1 ms