Protein–RNA interactions for Protein: P52954

LBX1, Transcription factor LBX1, humanhuman

Predictions only

Length 281 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LBX1P52954 PYY2-202ENST00000441253 1076 ntTSL 1 (best) BASIC30.23■■■□□ 2.43
LBX1P52954 FAM189B-210ENST00000621094 1335 ntTSL 1 (best) BASIC30.22■■■□□ 2.43
LBX1P52954 MXD3-203ENST00000439742 1483 ntAPPRIS P1 TSL 1 (best) BASIC30.22■■■□□ 2.43
LBX1P52954 AC148477.1-201ENST00000537720 476 ntTSL 3 BASIC30.21■■■□□ 2.43
LBX1P52954 OPRD1-202ENST00000621425 1217 ntTSL 1 (best) BASIC30.21■■■□□ 2.43
LBX1P52954 TMEM147-202ENST00000392204 935 ntTSL 2 BASIC30.2■■■□□ 2.43
LBX1P52954 AC129492.7-201ENST00000622992 756 ntBASIC30.2■■■□□ 2.43
LBX1P52954 HSPE1-201ENST00000233893 950 ntAPPRIS P1 TSL 1 (best) BASIC30.19■■■□□ 2.42
LBX1P52954 PIK3R2-208ENST00000617642 1446 ntTSL 5 BASIC30.19■■■□□ 2.42
LBX1P52954 SSBP4-202ENST00000348495 1721 ntAPPRIS ALT1 TSL 2 BASIC30.19■■■□□ 2.42
LBX1P52954 CDKN2B-202ENST00000380142 859 ntTSL 1 (best) BASIC30.18■■■□□ 2.42
LBX1P52954 AL121899.1-202ENST00000411839 536 ntTSL 5 BASIC30.18■■■□□ 2.42
LBX1P52954 CTDNEP1-208ENST00000573600 1724 ntAPPRIS P1 TSL 5 BASIC30.17■■■□□ 2.42
LBX1P52954 BATF3-201ENST00000243440 980 ntAPPRIS P1 TSL 1 (best) BASIC30.17■■■□□ 2.42
LBX1P52954 ADRA2C-201ENST00000330055 2129 ntAPPRIS P1 BASIC30.17■■■□□ 2.42
LBX1P52954 LINC00273-201ENST00000539813 1452 ntBASIC30.17■■■□□ 2.42
LBX1P52954 AGAP1-204ENST00000409457 2165 ntTSL 1 (best) BASIC30.17■■■□□ 2.42
LBX1P52954 LAGE3-201ENST00000357360 949 ntAPPRIS P1 TSL 1 (best) BASIC30.16■■■□□ 2.42
LBX1P52954 AC009299.2-201ENST00000482477 511 ntBASIC30.16■■■□□ 2.42
LBX1P52954 U2AF1-202ENST00000380276 940 ntAPPRIS ALT2 TSL 1 (best) BASIC30.15■■■□□ 2.42
LBX1P52954 CHST11-203ENST00000547956 936 ntTSL 2 BASIC30.15■■■□□ 2.42
LBX1P52954 HES6-204ENST00000409182 863 ntTSL 2 BASIC30.13■■■□□ 2.41
LBX1P52954 UBE2I-213ENST00000566587 1098 ntAPPRIS P1 TSL 2 BASIC30.13■■■□□ 2.41
LBX1P52954 AC092296.2-201ENST00000589470 999 ntBASIC30.13■■■□□ 2.41
LBX1P52954 TBX2-AS1-202ENST00000589814 539 ntTSL 3 BASIC30.13■■■□□ 2.41
LBX1P52954 RAET1E-AS1-203ENST00000606915 1210 ntTSL 1 (best) BASIC30.12■■■□□ 2.41
LBX1P52954 ATRNL1-207ENST00000527407 1583 ntTSL 5 BASIC30.11■■■□□ 2.41
LBX1P52954 AC025884.2-201ENST00000553429 711 ntBASIC30.11■■■□□ 2.41
LBX1P52954 EIF5A-211ENST00000576930 1439 ntAPPRIS P1 TSL 5 BASIC30.11■■■□□ 2.41
LBX1P52954 LYPD6B-204ENST00000409876 1248 ntAPPRIS ALT2 TSL 1 (best) BASIC30.1■■■□□ 2.41
LBX1P52954 TMEM238-201ENST00000444469 1000 ntAPPRIS P1 TSL 1 (best) BASIC30.1■■■□□ 2.41
LBX1P52954 FCGRT-217ENST00000599988 660 ntTSL 5 BASIC30.1■■■□□ 2.41
LBX1P52954 MYLIP-202ENST00000356840 1666 ntAPPRIS P1 TSL 1 (best) BASIC30.1■■■□□ 2.41
LBX1P52954 YIF1A-201ENST00000359461 943 ntTSL 2 BASIC30.09■■■□□ 2.41
LBX1P52954 GKAP1-202ENST00000376365 1511 ntTSL 1 (best) BASIC30.09■■■□□ 2.41
LBX1P52954 YIF1A-203ENST00000376901 1124 ntAPPRIS P1 TSL 1 (best) BASIC30.09■■■□□ 2.41
LBX1P52954 SOHLH1-202ENST00000425225 1411 ntAPPRIS ALT2 TSL 5 BASIC30.09■■■□□ 2.41
LBX1P52954 GNG10-201ENST00000374293 1491 ntAPPRIS P1 TSL 1 (best) BASIC30.08■■■□□ 2.41
LBX1P52954 FOXO6-202ENST00000641094 1476 ntAPPRIS P1 BASIC30.08■■■□□ 2.41
LBX1P52954 GUSBP5-201ENST00000418136 578 ntBASIC30.08■■■□□ 2.41
LBX1P52954 CTAG1B-201ENST00000328435 748 ntAPPRIS P1 TSL 1 (best) BASIC30.07■■■□□ 2.4
LBX1P52954 TRAF7-203ENST00000565383 799 ntTSL 5 BASIC30.07■■■□□ 2.4
LBX1P52954 CCER2-201ENST00000571838 1057 ntAPPRIS P2 TSL 5 BASIC30.07■■■□□ 2.4
LBX1P52954 CTAG1A-202ENST00000599837 748 ntAPPRIS P1 TSL 1 (best) BASIC30.07■■■□□ 2.4
LBX1P52954 AC093390.2-201ENST00000638628 1007 ntTSL 5 BASIC30.07■■■□□ 2.4
LBX1P52954 CAPNS1-201ENST00000246533 1918 ntAPPRIS P2 TSL 1 (best) BASIC30.06■■■□□ 2.4
LBX1P52954 C9orf47-202ENST00000375850 859 ntAPPRIS ALT2 TSL 3 BASIC30.06■■■□□ 2.4
LBX1P52954 C11orf91-201ENST00000379011 811 ntAPPRIS P1 TSL 1 (best) BASIC30.06■■■□□ 2.4
LBX1P52954 ERFE-207ENST00000546354 1065 ntAPPRIS P2 TSL 1 (best) BASIC30.06■■■□□ 2.4
LBX1P52954 GNPTAB-206ENST00000549940 1678 ntTSL 1 (best) BASIC30.05■■■□□ 2.4
LBX1P52954 IGFBPL1-201ENST00000377694 1093 ntAPPRIS P1 TSL 2 BASIC30.05■■■□□ 2.4
LBX1P52954 CHKB-AS1-201ENST00000380711 578 ntTSL 2 BASIC30.05■■■□□ 2.4
LBX1P52954 ECEL1P2-201ENST00000461596 1295 ntBASIC30.05■■■□□ 2.4
LBX1P52954 HSPB6-202ENST00000587965 711 ntTSL 2 BASIC30.05■■■□□ 2.4
LBX1P52954 PLEKHG6-206ENST00000536531 1683 ntTSL 1 (best) BASIC30.04■■■□□ 2.4
LBX1P52954 C14orf80-202ENST00000334656 1358 ntAPPRIS ALT2 TSL 2 BASIC30.04■■■□□ 2.4
LBX1P52954 FAM120C-203ENST00000477084 1140 ntAPPRIS ALT2 TSL 1 (best) BASIC30.04■■■□□ 2.4
LBX1P52954 BMP7-202ENST00000395864 1746 ntTSL 5 BASIC30.04■■■□□ 2.4
LBX1P52954 GPR137-202ENST00000377702 1478 ntTSL 1 (best) BASIC30.04■■■□□ 2.4
LBX1P52954 CPNE1-203ENST00000397442 1695 ntTSL 5 BASIC30.04■■■□□ 2.4
LBX1P52954 PCYT2-206ENST00000571105 1628 ntTSL 5 BASIC30.04■■■□□ 2.4
LBX1P52954 PAOX-206ENST00000480071 1324 ntTSL 1 (best) BASIC30.03■■■□□ 2.4
LBX1P52954 TMEM54-201ENST00000329151 871 ntTSL 1 (best) BASIC30.03■■■□□ 2.4
LBX1P52954 LY6H-201ENST00000342752 951 ntAPPRIS ALT2 TSL 1 (best) BASIC30.03■■■□□ 2.4
LBX1P52954 LY6H-202ENST00000414417 1056 ntAPPRIS ALT2 TSL 1 (best) BASIC30.03■■■□□ 2.4
LBX1P52954 LY6H-203ENST00000430474 925 ntAPPRIS P3 TSL 3 BASIC30.03■■■□□ 2.4
LBX1P52954 PTRH1-208ENST00000543175 814 ntAPPRIS P1 TSL 1 (best) BASIC30.03■■■□□ 2.4
LBX1P52954 JMJD8-202ENST00000562111 823 ntTSL 2 BASIC30.01■■■□□ 2.39
LBX1P52954 KCTD15-206ENST00000588881 1211 ntAPPRIS P1 TSL 2 BASIC30.01■■■□□ 2.39
LBX1P52954 NBPF26-209ENST00000624419 1133 ntTSL 5 BASIC30.01■■■□□ 2.39
LBX1P52954 KRT8P33-201ENST00000508125 1423 ntBASIC30.01■■■□□ 2.39
LBX1P52954 CMPK2-203ENST00000458098 1224 ntTSL 1 (best) BASIC30■■■□□ 2.39
LBX1P52954 OR2A1-AS1-204ENST00000470435 602 ntBASIC30■■■□□ 2.39
LBX1P52954 TMEM218-215ENST00000532407 1103 ntAPPRIS P1 TSL 1 (best) BASIC30■■■□□ 2.39
LBX1P52954 EIF5A-202ENST00000336458 1511 ntAPPRIS P1 TSL 1 (best) BASIC30■■■□□ 2.39
LBX1P52954 RSPO4-202ENST00000400634 722 ntTSL 1 (best) BASIC29.99■■■□□ 2.39
LBX1P52954 RP9P-202ENST00000450133 1212 ntBASIC29.98■■■□□ 2.39
LBX1P52954 AL592293.1-201ENST00000502889 1188 ntBASIC29.98■■■□□ 2.39
LBX1P52954 ARL6IP4-208ENST00000439686 796 ntAPPRIS ALT2 TSL 3 BASIC29.97■■■□□ 2.39
LBX1P52954 AC053527.1-201ENST00000502790 685 ntTSL 3 BASIC29.97■■■□□ 2.39
LBX1P52954 PLEKHF2-202ENST00000519516 1144 ntAPPRIS P1 TSL 3 BASIC29.97■■■□□ 2.39
LBX1P52954 MDK-203ENST00000395566 828 ntAPPRIS P2 TSL 1 (best) BASIC29.96■■■□□ 2.39
LBX1P52954 PEMT-202ENST00000395781 1050 ntTSL 2 BASIC29.95■■■□□ 2.39
LBX1P52954 PLEKHJ1-213ENST00000591099 1092 ntTSL 2 BASIC29.94■■■□□ 2.38
LBX1P52954 TGIF1-202ENST00000343820 2076 ntAPPRIS P1 TSL 1 (best) BASIC29.94■■■□□ 2.38
LBX1P52954 AL356441.2-201ENST00000443009 864 ntBASIC29.93■■■□□ 2.38
LBX1P52954 LSM7-203ENST00000585409 512 ntTSL 2 BASIC29.93■■■□□ 2.38
LBX1P52954 EPB41L4A-AS2-201ENST00000623705 1396 ntBASIC29.92■■■□□ 2.38
LBX1P52954 C9orf147-202ENST00000457681 561 ntTSL 2 BASIC29.92■■■□□ 2.38
LBX1P52954 AC010980.1-201ENST00000587192 1142 ntBASIC29.92■■■□□ 2.38
LBX1P52954 CAMK2N2-201ENST00000296238 1362 ntAPPRIS P1 TSL 1 (best) BASIC29.91■■■□□ 2.38
LBX1P52954 NOG-201ENST00000332822 1892 ntAPPRIS P1 BASIC29.91■■■□□ 2.38
LBX1P52954 FOXP1-201ENST00000318779 843 ntTSL 1 (best) BASIC29.91■■■□□ 2.38
LBX1P52954 BHLHE23-202ENST00000612929 1109 ntBASIC29.91■■■□□ 2.38
LBX1P52954 TPI1-210ENST00000613953 1460 ntTSL 1 (best) BASIC29.91■■■□□ 2.38
LBX1P52954 TSPAN3-203ENST00000424443 1530 ntTSL 2 BASIC29.91■■■□□ 2.38
LBX1P52954 TMEM80-202ENST00000397512 1572 ntAPPRIS ALT2 TSL 1 (best) BASIC29.9■■■□□ 2.38
LBX1P52954 CDKN2A-214ENST00000579755 1283 ntAPPRIS P1 TSL 1 (best) BASIC29.9■■■□□ 2.38
LBX1P52954 AC148477.6-201ENST00000623746 465 ntBASIC29.9■■■□□ 2.38
LBX1P52954 AC064853.2-201ENST00000641246 144 ntAPPRIS P1 BASIC29.89■■■□□ 2.38
Retrieved 100 of 98,524 protein–RNA pairs in 46.7 ms