Protein–RNA interactions for Protein: P23510

TNFSF4, Tumor necrosis factor ligand superfamily member 4, humanhuman

Predictions only

Length 183 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TNFSF4P23510 AC135983.2-203ENST00000454486 1613 ntBASIC21.85■■□□□ 1.09
TNFSF4P23510 C5orf66-AS1-201ENST00000507035 843 ntTSL 2 BASIC21.85■■□□□ 1.09
TNFSF4P23510 C11orf95-204ENST00000546282 390 ntTSL 3 BASIC21.85■■□□□ 1.09
TNFSF4P23510 DUX4L11-201ENST00000611504 1267 ntBASIC21.85■■□□□ 1.09
TNFSF4P23510 DUX4L12-201ENST00000614593 1267 ntBASIC21.85■■□□□ 1.09
TNFSF4P23510 DUX4L14-201ENST00000621227 1267 ntBASIC21.85■■□□□ 1.09
TNFSF4P23510 C16orf59-202ENST00000483320 1709 ntAPPRIS ALT2 TSL 2 BASIC21.85■■□□□ 1.09
TNFSF4P23510 SIRT3-201ENST00000382743 2543 ntAPPRIS P2 TSL 1 (best) BASIC21.84■■□□□ 1.09
TNFSF4P23510 NGB-201ENST00000298352 1884 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
TNFSF4P23510 AGPS-202ENST00000409888 815 ntTSL 4 BASIC21.84■■□□□ 1.09
TNFSF4P23510 TRIM52-AS1-203ENST00000509252 529 ntTSL 3 BASIC21.84■■□□□ 1.09
TNFSF4P23510 SLC35D2-201ENST00000253270 1613 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
TNFSF4P23510 NKX2-1-204ENST00000522719 1417 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.09
TNFSF4P23510 HSD11B1L-202ENST00000339423 1660 ntAPPRIS P3 TSL 1 (best) BASIC21.83■■□□□ 1.09
TNFSF4P23510 PVT1-219ENST00000523427 938 ntTSL 3 BASIC21.82■■□□□ 1.08
TNFSF4P23510 RNF166-209ENST00000567844 633 ntTSL 5 BASIC21.82■■□□□ 1.08
TNFSF4P23510 FOXA2-202ENST00000419308 2422 ntAPPRIS ALT2 TSL 1 (best) BASIC21.82■■□□□ 1.08
TNFSF4P23510 CUL4A-202ENST00000375440 2364 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
TNFSF4P23510 AC187653.1-201ENST00000506382 702 ntAPPRIS P1 TSL 5 BASIC21.81■■□□□ 1.08
TNFSF4P23510 MAPK8IP1P1-201ENST00000574657 1439 ntBASIC21.8■■□□□ 1.08
TNFSF4P23510 MKRN1-202ENST00000443720 1601 ntAPPRIS ALT2 TSL 1 (best) BASIC21.8■■□□□ 1.08
TNFSF4P23510 SIGMAR1-203ENST00000378892 1743 ntTSL 2 BASIC21.8■■□□□ 1.08
TNFSF4P23510 AL139393.2-201ENST00000608721 2025 ntBASIC21.8■■□□□ 1.08
TNFSF4P23510 FAM149A-201ENST00000227065 2708 ntAPPRIS P2 TSL 1 (best) BASIC21.8■■□□□ 1.08
TNFSF4P23510 CIB2-201ENST00000258930 1598 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
TNFSF4P23510 MEST-211ENST00000437945 1455 ntTSL 5 BASIC21.8■■□□□ 1.08
TNFSF4P23510 AC013394.1-201ENST00000629685 808 ntAPPRIS P1 TSL 5 BASIC21.8■■□□□ 1.08
TNFSF4P23510 WHAMMP2-203ENST00000563942 1603 ntBASIC21.8■■□□□ 1.08
TNFSF4P23510 FGFRL1-205ENST00000510644 2304 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
TNFSF4P23510 INPP4A-203ENST00000409463 1565 ntTSL 1 (best) BASIC21.79■■□□□ 1.08
TNFSF4P23510 AURKAIP1-203ENST00000338370 1072 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
TNFSF4P23510 CLEC3B-202ENST00000428034 752 ntTSL 2 BASIC21.79■■□□□ 1.08
TNFSF4P23510 MTMR1-214ENST00000542156 1227 ntTSL 1 (best) BASIC21.79■■□□□ 1.08
TNFSF4P23510 AGFG1-205ENST00000409979 2089 ntAPPRIS ALT1 TSL 5 BASIC21.79■■□□□ 1.08
TNFSF4P23510 ITPKA-201ENST00000260386 1824 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
TNFSF4P23510 DUX4L13-201ENST00000554103 1267 ntBASIC21.78■■□□□ 1.08
TNFSF4P23510 DUX4L15-201ENST00000611059 1267 ntBASIC21.78■■□□□ 1.08
TNFSF4P23510 DUX4L23-201ENST00000615195 1269 ntBASIC21.78■■□□□ 1.08
TNFSF4P23510 DUX4L24-201ENST00000617576 1269 ntBASIC21.78■■□□□ 1.08
TNFSF4P23510 DUX4L22-201ENST00000618238 1269 ntBASIC21.78■■□□□ 1.08
TNFSF4P23510 DUX4L20-201ENST00000619712 1269 ntBASIC21.78■■□□□ 1.08
TNFSF4P23510 DUX4L21-201ENST00000622058 1269 ntBASIC21.78■■□□□ 1.08
TNFSF4P23510 DUX4L10-201ENST00000622460 1267 ntBASIC21.78■■□□□ 1.08
TNFSF4P23510 DUX4L25-201ENST00000624915 1269 ntBASIC21.78■■□□□ 1.08
TNFSF4P23510 CHML-204ENST00000638121 920 ntTSL 2 BASIC21.78■■□□□ 1.08
TNFSF4P23510 KIAA2013-202ENST00000376576 2539 ntTSL 2 BASIC21.78■■□□□ 1.08
TNFSF4P23510 C2orf88-204ENST00000409870 1441 ntAPPRIS P1 TSL 2 BASIC21.78■■□□□ 1.08
TNFSF4P23510 EID2-201ENST00000390658 1629 ntAPPRIS P1 BASIC21.77■■□□□ 1.08
TNFSF4P23510 BCL3-201ENST00000164227 2038 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
TNFSF4P23510 MACF1-219ENST00000484793 834 ntTSL 2 BASIC21.77■■□□□ 1.08
TNFSF4P23510 CUEDC1-201ENST00000360238 2193 ntAPPRIS P1 TSL 2 BASIC21.77■■□□□ 1.07
TNFSF4P23510 EBPL-201ENST00000242827 914 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
TNFSF4P23510 P2RX2-203ENST00000350048 1344 ntTSL 1 (best) BASIC21.76■■□□□ 1.07
TNFSF4P23510 ANKRD16-201ENST00000191063 1567 ntTSL 3 BASIC21.75■■□□□ 1.07
TNFSF4P23510 MAZ-205ENST00000562337 1574 ntTSL 3 BASIC21.75■■□□□ 1.07
TNFSF4P23510 AC231981.1-201ENST00000450917 974 ntTSL 3 BASIC21.75■■□□□ 1.07
TNFSF4P23510 MARCKSL1-201ENST00000329421 1699 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
TNFSF4P23510 RRAD-202ENST00000420652 1476 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
TNFSF4P23510 RNF130-205ENST00000521389 2263 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
TNFSF4P23510 RASL10A-202ENST00000401450 1720 ntTSL 2 BASIC21.73■■□□□ 1.07
TNFSF4P23510 HSD17B1-201ENST00000225929 1265 ntAPPRIS ALT2 TSL 2 BASIC21.73■■□□□ 1.07
TNFSF4P23510 RUNX2-203ENST00000371436 1588 ntAPPRIS ALT2 TSL 5 BASIC21.73■■□□□ 1.07
TNFSF4P23510 F8A3-201ENST00000622749 1759 ntAPPRIS P1 BASIC21.72■■□□□ 1.07
TNFSF4P23510 RPUSD1-208ENST00000567114 1835 ntTSL 2 BASIC21.72■■□□□ 1.07
TNFSF4P23510 PHF20L1-207ENST00000395379 1998 ntTSL 5 BASIC21.72■■□□□ 1.07
TNFSF4P23510 EIF5A-202ENST00000336458 1511 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
TNFSF4P23510 SLC16A8-201ENST00000320521 1878 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
TNFSF4P23510 PPP1CC-208ENST00000551676 1581 ntTSL 2 BASIC21.71■■□□□ 1.07
TNFSF4P23510 TMEM147-202ENST00000392204 935 ntTSL 2 BASIC21.71■■□□□ 1.07
TNFSF4P23510 RANBP1-202ENST00000402752 1132 ntAPPRIS ALT1 TSL 1 (best) BASIC21.71■■□□□ 1.07
TNFSF4P23510 GDI1-215ENST00000630693 786 ntTSL 4 BASIC21.71■■□□□ 1.07
TNFSF4P23510 SLC35D2-203ENST00000375259 1361 ntTSL 1 (best) BASIC21.71■■□□□ 1.07
TNFSF4P23510 TMEM64-201ENST00000418210 4663 ntTSL 2 BASIC21.71■■□□□ 1.07
TNFSF4P23510 CHST11-202ENST00000546689 756 ntTSL 2 BASIC21.7■■□□□ 1.06
TNFSF4P23510 MIR3648-2-201ENST00000581792 180 ntBASIC21.7■■□□□ 1.06
TNFSF4P23510 MIR3648-1-201ENST00000615959 180 ntBASIC21.7■■□□□ 1.06
TNFSF4P23510 RCC1L-202ENST00000614461 2419 ntTSL 1 (best) BASIC21.7■■□□□ 1.06
TNFSF4P23510 SLC30A10-202ENST00000366926 1915 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
TNFSF4P23510 GADD45G-201ENST00000252506 1065 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
TNFSF4P23510 WNT5A-AS1-201ENST00000469484 500 ntTSL 3 BASIC21.69■■□□□ 1.06
TNFSF4P23510 ESRRA-201ENST00000000442 2215 ntAPPRIS P3 TSL 1 (best) BASIC21.69■■□□□ 1.06
TNFSF4P23510 ZNF470-206ENST00000601902 1640 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
TNFSF4P23510 MTCH1-202ENST00000373627 2057 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
TNFSF4P23510 HES6-205ENST00000409356 528 ntTSL 2 BASIC21.68■■□□□ 1.06
TNFSF4P23510 RHOC-202ENST00000339083 1418 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
TNFSF4P23510 ZFAND2B-208ENST00000409594 2021 ntTSL 2 BASIC21.68■■□□□ 1.06
TNFSF4P23510 RTN2-201ENST00000245923 2293 ntTSL 1 (best) BASIC21.68■■□□□ 1.06
TNFSF4P23510 SLC35A1-203ENST00000369557 1653 ntTSL 2 BASIC21.67■■□□□ 1.06
TNFSF4P23510 HLA-V-202ENST00000446817 847 ntBASIC21.67■■□□□ 1.06
TNFSF4P23510 GSX2-202ENST00000503800 1181 ntTSL 5 BASIC21.67■■□□□ 1.06
TNFSF4P23510 CAAP1-205ENST00000520187 773 ntTSL 5 BASIC21.67■■□□□ 1.06
TNFSF4P23510 CR559946.2-201ENST00000623684 991 ntBASIC21.67■■□□□ 1.06
TNFSF4P23510 HOXD13-201ENST00000392539 2240 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
TNFSF4P23510 CCZ1B-215ENST00000626257 2211 ntTSL 2 BASIC21.67■■□□□ 1.06
TNFSF4P23510 ABCB10P3-201ENST00000561950 2166 ntBASIC21.67■■□□□ 1.06
TNFSF4P23510 WDSUB1-205ENST00000409990 1920 ntAPPRIS P1 TSL 2 BASIC21.67■■□□□ 1.06
TNFSF4P23510 SPATA5L1-208ENST00000638607 1863 ntTSL 2 BASIC21.66■■□□□ 1.06
TNFSF4P23510 FHL2-202ENST00000344213 1769 ntTSL 1 (best) BASIC21.66■■□□□ 1.06
TNFSF4P23510 MPP6-203ENST00000409761 1703 ntTSL 5 BASIC21.66■■□□□ 1.06
TNFSF4P23510 FKBP1A-205ENST00000439640 1583 ntTSL 3 BASIC21.66■■□□□ 1.06
Retrieved 100 of 98,524 protein–RNA pairs in 35.5 ms