Protein–RNA interactions for Protein: P01562

IFNA1, Interferon alpha-1/13, humanhuman

Predictions only

Length 189 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
IFNA1P01562 CHST14-202ENST00000559991 1968 ntTSL 5 BASIC20.26■□□□□ 0.83
IFNA1P01562 SLC16A8-201ENST00000320521 1878 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
IFNA1P01562 KANSL2-215ENST00000553086 1830 ntTSL 5 BASIC20.26■□□□□ 0.83
IFNA1P01562 GUSB-202ENST00000421103 1742 ntTSL 2 BASIC20.26■□□□□ 0.83
IFNA1P01562 SNTA1-201ENST00000217381 2342 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
IFNA1P01562 AKAP17A-202ENST00000381261 2187 ntAPPRIS ALT2 TSL 1 (best) BASIC20.25■□□□□ 0.83
IFNA1P01562 POU2F2-208ENST00000529952 1716 ntAPPRIS ALT2 TSL 1 (best) BASIC20.25■□□□□ 0.83
IFNA1P01562 KANSL1L-207ENST00000452086 2334 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
IFNA1P01562 CARS2-201ENST00000257347 1879 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
IFNA1P01562 GNAS-211ENST00000371095 1931 ntAPPRIS ALT1 TSL 1 (best) BASIC20.25■□□□□ 0.83
IFNA1P01562 PKM-203ENST00000389093 2279 ntTSL 5 BASIC20.24■□□□□ 0.83
IFNA1P01562 PTPRM-211ENST00000580170 5941 ntAPPRIS ALT2 TSL 1 (best) BASIC20.24■□□□□ 0.83
IFNA1P01562 KIAA2013-201ENST00000376572 2815 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
IFNA1P01562 ANKRD28-201ENST00000399451 6564 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
IFNA1P01562 FOXA3-201ENST00000302177 1989 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
IFNA1P01562 HDHD5-202ENST00000336737 1799 ntAPPRIS ALT2 TSL 1 (best) BASIC20.23■□□□□ 0.83
IFNA1P01562 ETS1-201ENST00000319397 2231 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
IFNA1P01562 BIN1-210ENST00000393041 2272 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
IFNA1P01562 AMZ2-201ENST00000359783 1722 ntTSL 5 BASIC20.23■□□□□ 0.83
IFNA1P01562 CDH23-208ENST00000461841 2000 ntTSL 5 BASIC20.23■□□□□ 0.83
IFNA1P01562 PLEKHA8-201ENST00000258679 2293 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
IFNA1P01562 TRADD-201ENST00000345057 1877 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
IFNA1P01562 NR6A1-203ENST00000416460 1898 ntAPPRIS ALT2 TSL 1 (best) BASIC20.21■□□□□ 0.83
IFNA1P01562 MBOAT7-201ENST00000245615 2529 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
IFNA1P01562 NKPD1-202ENST00000589776 1950 ntAPPRIS P1 BASIC20.21■□□□□ 0.83
IFNA1P01562 PROC-203ENST00000409048 1586 ntTSL 5 BASIC20.2■□□□□ 0.82
IFNA1P01562 OTUD5-203ENST00000396743 2682 ntAPPRIS ALT1 TSL 1 (best) BASIC20.2■□□□□ 0.82
IFNA1P01562 C11orf80-210ENST00000527634 1666 ntAPPRIS ALT2 TSL 5 BASIC20.19■□□□□ 0.82
IFNA1P01562 GNAS-207ENST00000354359 1975 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
IFNA1P01562 GNAS-210ENST00000371085 1972 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
IFNA1P01562 MTMR1-202ENST00000370390 2755 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
IFNA1P01562 TANGO2-214ENST00000447208 2086 ntTSL 3 BASIC20.19■□□□□ 0.82
IFNA1P01562 LINC01578-203ENST00000554669 578 ntTSL 5 BASIC20.19■□□□□ 0.82
IFNA1P01562 RNF40-201ENST00000324685 5634 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
IFNA1P01562 MKNK2-202ENST00000309340 1744 ntAPPRIS ALT2 TSL 1 (best) BASIC20.19■□□□□ 0.82
IFNA1P01562 TTC9-201ENST00000256367 5217 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
IFNA1P01562 REXO4-201ENST00000371935 1899 ntTSL 3 BASIC20.18■□□□□ 0.82
IFNA1P01562 SLC22A23-201ENST00000380298 1574 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
IFNA1P01562 MSANTD2-201ENST00000239614 2495 ntTSL 2 BASIC20.18■□□□□ 0.82
IFNA1P01562 PKM-204ENST00000449901 2526 ntTSL 2 BASIC20.18■□□□□ 0.82
IFNA1P01562 PARD3-202ENST00000346874 5894 ntAPPRIS ALT2 TSL 1 (best) BASIC20.18■□□□□ 0.82
IFNA1P01562 PARD3-203ENST00000350537 5867 ntAPPRIS ALT2 TSL 1 (best) BASIC20.18■□□□□ 0.82
IFNA1P01562 ZDHHC16-204ENST00000370842 1877 ntAPPRIS ALT1 TSL 5 BASIC20.18■□□□□ 0.82
IFNA1P01562 ABHD17A-202ENST00000292577 1757 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
IFNA1P01562 HSF1-204ENST00000528838 2142 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
IFNA1P01562 NRXN2-204ENST00000377559 6413 ntAPPRIS ALT2 TSL 1 (best) BASIC20.17■□□□□ 0.82
IFNA1P01562 GATA3-AS1-201ENST00000355358 2214 ntTSL 2 BASIC20.16■□□□□ 0.82
IFNA1P01562 CABLES1-201ENST00000256925 5002 ntAPPRIS P4 TSL 1 (best) BASIC20.16■□□□□ 0.82
IFNA1P01562 PCK2-202ENST00000396973 1830 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
IFNA1P01562 CLK2-203ENST00000368361 2166 ntAPPRIS ALT1 TSL 1 (best) BASIC20.15■□□□□ 0.82
IFNA1P01562 PIK3R2-207ENST00000617130 2187 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
IFNA1P01562 CHMP4B-201ENST00000217402 1646 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
IFNA1P01562 GLRB-203ENST00000509282 1757 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
IFNA1P01562 MAGI2-202ENST00000419488 6800 ntAPPRIS ALT2 TSL 1 (best) BASIC20.15■□□□□ 0.82
IFNA1P01562 NELFB-201ENST00000343053 2698 ntAPPRIS ALT2 TSL 1 (best) BASIC20.14■□□□□ 0.82
IFNA1P01562 FAM57A-202ENST00000308278 2412 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.82
IFNA1P01562 ACAA1-220ENST00000627515 1862 ntTSL 5 BASIC20.14■□□□□ 0.81
IFNA1P01562 F8A3-201ENST00000622749 1759 ntAPPRIS P1 BASIC20.14■□□□□ 0.81
IFNA1P01562 SLC35A1-203ENST00000369557 1653 ntTSL 2 BASIC20.14■□□□□ 0.81
IFNA1P01562 AL360182.2-201ENST00000451656 470 ntTSL 3 BASIC20.14■□□□□ 0.81
IFNA1P01562 AKAP8L-208ENST00000595465 1933 ntTSL 2 BASIC20.14■□□□□ 0.81
IFNA1P01562 LGR4-201ENST00000379214 5206 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
IFNA1P01562 FAH-213ENST00000561421 1549 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
IFNA1P01562 PRKAR1B-203ENST00000403562 1917 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
IFNA1P01562 SH3D19-211ENST00000604030 5228 ntTSL 5 BASIC20.12■□□□□ 0.81
IFNA1P01562 SLC15A3-201ENST00000227880 2115 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
IFNA1P01562 MARCH11-201ENST00000332432 1741 ntAPPRIS P1 TSL 5 BASIC20.11■□□□□ 0.81
IFNA1P01562 TSKU-201ENST00000333090 2712 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
IFNA1P01562 SH3GL1-201ENST00000269886 2516 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
IFNA1P01562 P2RY2-202ENST00000393596 2174 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
IFNA1P01562 ANKRD65-205ENST00000537107 2190 ntAPPRIS P1 TSL 5 BASIC20.11■□□□□ 0.81
IFNA1P01562 CTU1-201ENST00000421832 2087 ntAPPRIS P1 TSL 2 BASIC20.11■□□□□ 0.81
IFNA1P01562 AMIGO1-201ENST00000369862 2229 ntAPPRIS P1 TSL 5 BASIC20.1■□□□□ 0.81
IFNA1P01562 PARD3-213ENST00000545260 5740 ntAPPRIS ALT2 TSL 1 (best) BASIC20.1■□□□□ 0.81
IFNA1P01562 MAP3K3-210ENST00000584573 2480 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
IFNA1P01562 CEBPB-201ENST00000303004 1956 ntAPPRIS P1 BASIC20.1■□□□□ 0.81
IFNA1P01562 CTSA-203ENST00000372459 1972 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
IFNA1P01562 ABHD17C-202ENST00000558464 1976 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
IFNA1P01562 FSD1L-208ENST00000495708 1906 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
IFNA1P01562 FSD1-201ENST00000221856 1831 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
IFNA1P01562 PPP1CC-208ENST00000551676 1581 ntTSL 2 BASIC20.09■□□□□ 0.81
IFNA1P01562 SNAI3-AS1-204ENST00000567997 2048 ntBASIC20.09■□□□□ 0.81
IFNA1P01562 ZNF692-201ENST00000306601 1931 ntAPPRIS P3 TSL 1 (best) BASIC20.09■□□□□ 0.81
IFNA1P01562 ZNF653-201ENST00000293771 2240 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
IFNA1P01562 LINC01003-201ENST00000564834 1764 ntBASIC20.08■□□□□ 0.81
IFNA1P01562 MAZ-202ENST00000322945 2532 ntAPPRIS ALT2 TSL 1 (best) BASIC20.08■□□□□ 0.81
IFNA1P01562 TOP1MT-208ENST00000519148 1868 ntTSL 2 BASIC20.08■□□□□ 0.81
IFNA1P01562 ANKS6-201ENST00000353234 7164 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
IFNA1P01562 DNAH9-209ENST00000579828 1986 ntTSL 2 BASIC20.08■□□□□ 0.8
IFNA1P01562 PLPP2-203ENST00000434325 1383 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
IFNA1P01562 DERA-201ENST00000428559 1705 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
IFNA1P01562 NPTXR-202ENST00000640136 1503 ntAPPRIS P2 TSL 1 (best) BASIC20.07■□□□□ 0.8
IFNA1P01562 D2HGDH-203ENST00000403782 2208 ntTSL 2 BASIC20.07■□□□□ 0.8
IFNA1P01562 ANKS1B-203ENST00000341752 2115 ntTSL 2 BASIC20.07■□□□□ 0.8
IFNA1P01562 RUNX2-205ENST00000465038 1770 ntAPPRIS P4 TSL 5 BASIC20.07■□□□□ 0.8
IFNA1P01562 XKR6-201ENST00000297303 1550 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
IFNA1P01562 RUNX2-203ENST00000371436 1588 ntAPPRIS ALT2 TSL 5 BASIC20.07■□□□□ 0.8
IFNA1P01562 HDAC3-201ENST00000305264 1959 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
IFNA1P01562 SAP30L-201ENST00000297109 6226 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
IFNA1P01562 SYNGR1-202ENST00000318801 1361 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
Retrieved 100 of 98,524 protein–RNA pairs in 78.9 ms