Protein–RNA interactions for Protein: A0A0J9YWB2

TRBV7-9, T-cell receptor beta variable 7-9 (Fragment), humanhuman

Predictions only

Length 115 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRBV7-9A0A0J9YWB2 LANCL3-203ENST00000614025 1469 ntTSL 2 BASIC19.03■□□□□ 0.64
TRBV7-9A0A0J9YWB2 SDCCAG3-201ENST00000298537 2314 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
TRBV7-9A0A0J9YWB2 UBAC1-201ENST00000371756 1867 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
TRBV7-9A0A0J9YWB2 MNX1-207ENST00000543409 1620 ntAPPRIS ALT2 TSL 1 (best) BASIC19.02■□□□□ 0.64
TRBV7-9A0A0J9YWB2 SHOX2-201ENST00000389589 2072 ntAPPRIS P3 TSL 1 (best) BASIC19.02■□□□□ 0.63
TRBV7-9A0A0J9YWB2 ZDHHC23-206ENST00000498275 2055 ntAPPRIS ALT2 TSL 2 BASIC19.02■□□□□ 0.63
TRBV7-9A0A0J9YWB2 NPB-202ENST00000573081 2154 ntAPPRIS ALT2 BASIC19.02■□□□□ 0.63
TRBV7-9A0A0J9YWB2 LMTK3-201ENST00000270238 4972 ntAPPRIS P2 TSL 1 (best) BASIC19.02■□□□□ 0.63
TRBV7-9A0A0J9YWB2 CCDC160-202ENST00000517294 1790 ntAPPRIS P1 TSL 5 BASIC19.01■□□□□ 0.63
TRBV7-9A0A0J9YWB2 RHEB-201ENST00000262187 2075 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
TRBV7-9A0A0J9YWB2 VEGFC-202ENST00000618562 2064 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
TRBV7-9A0A0J9YWB2 FKBP1A-205ENST00000439640 1583 ntTSL 3 BASIC19.01■□□□□ 0.63
TRBV7-9A0A0J9YWB2 ZIC2-201ENST00000376335 2983 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
TRBV7-9A0A0J9YWB2 PLEKHF1-201ENST00000436066 2084 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
TRBV7-9A0A0J9YWB2 CHML-205ENST00000638160 705 ntTSL 3 BASIC19■□□□□ 0.63
TRBV7-9A0A0J9YWB2 MXRA7-203ENST00000449428 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC19■□□□□ 0.63
TRBV7-9A0A0J9YWB2 AP002884.3-203ENST00000419895 1711 ntTSL 2 BASIC19■□□□□ 0.63
TRBV7-9A0A0J9YWB2 AC012629.2-201ENST00000606513 377 ntTSL 5 BASIC18.99■□□□□ 0.63
TRBV7-9A0A0J9YWB2 VEGFA-231ENST00000640499 1188 ntAPPRIS P3 TSL 1 (best) BASIC18.99■□□□□ 0.63
TRBV7-9A0A0J9YWB2 BARX1-201ENST00000253968 1533 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
TRBV7-9A0A0J9YWB2 TMEM55B-201ENST00000250489 1961 ntAPPRIS P3 TSL 1 (best) BASIC18.99■□□□□ 0.63
TRBV7-9A0A0J9YWB2 ZNF219-201ENST00000360947 3071 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
TRBV7-9A0A0J9YWB2 VIPR2-203ENST00000402066 1926 ntAPPRIS ALT2 TSL 5 BASIC18.98■□□□□ 0.63
TRBV7-9A0A0J9YWB2 C14orf80-202ENST00000334656 1358 ntAPPRIS ALT2 TSL 2 BASIC18.98■□□□□ 0.63
TRBV7-9A0A0J9YWB2 MIR762-201ENST00000390236 83 ntBASIC18.98■□□□□ 0.63
TRBV7-9A0A0J9YWB2 ABHD17C-202ENST00000558464 1976 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
TRBV7-9A0A0J9YWB2 GSX1-201ENST00000302945 1663 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
TRBV7-9A0A0J9YWB2 RAB40C-201ENST00000248139 2699 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
TRBV7-9A0A0J9YWB2 RALY-201ENST00000246194 1789 ntAPPRIS P4 TSL 1 (best) BASIC18.97■□□□□ 0.63
TRBV7-9A0A0J9YWB2 HDHD5-202ENST00000336737 1799 ntAPPRIS ALT2 TSL 1 (best) BASIC18.97■□□□□ 0.63
TRBV7-9A0A0J9YWB2 AC092755.2-201ENST00000560199 402 ntTSL 3 BASIC18.97■□□□□ 0.63
TRBV7-9A0A0J9YWB2 TMEM266-201ENST00000388942 2520 ntAPPRIS P1 TSL 5 BASIC18.97■□□□□ 0.63
TRBV7-9A0A0J9YWB2 TBCC-201ENST00000372876 1616 ntAPPRIS P1 BASIC18.96■□□□□ 0.63
TRBV7-9A0A0J9YWB2 AL121749.1-202ENST00000609313 2153 ntBASIC18.96■□□□□ 0.63
TRBV7-9A0A0J9YWB2 MZT2B-202ENST00000409255 769 ntAPPRIS ALT2 TSL 5 BASIC18.96■□□□□ 0.63
TRBV7-9A0A0J9YWB2 RPS2-209ENST00000529806 993 ntTSL 3 BASIC18.96■□□□□ 0.63
TRBV7-9A0A0J9YWB2 IHH-201ENST00000295731 2023 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
TRBV7-9A0A0J9YWB2 HOOK2-201ENST00000264827 2603 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
TRBV7-9A0A0J9YWB2 PHF23-205ENST00000571362 1768 ntTSL 2 BASIC18.96■□□□□ 0.63
TRBV7-9A0A0J9YWB2 RUNDC3A-201ENST00000225441 1821 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
TRBV7-9A0A0J9YWB2 C11orf80-210ENST00000527634 1666 ntAPPRIS ALT2 TSL 5 BASIC18.95■□□□□ 0.62
TRBV7-9A0A0J9YWB2 TCFL5-201ENST00000217162 2453 ntAPPRIS ALT2 TSL 1 (best) BASIC18.95■□□□□ 0.62
TRBV7-9A0A0J9YWB2 TCFL5-202ENST00000335351 2456 ntAPPRIS P2 TSL 1 (best) BASIC18.95■□□□□ 0.62
TRBV7-9A0A0J9YWB2 NPC2-207ENST00000555619 1035 ntAPPRIS P2 TSL 1 (best) BASIC18.95■□□□□ 0.62
TRBV7-9A0A0J9YWB2 LINC01003-201ENST00000564834 1764 ntBASIC18.95■□□□□ 0.62
TRBV7-9A0A0J9YWB2 CTBP1-201ENST00000290921 2297 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
TRBV7-9A0A0J9YWB2 SNTB1-202ENST00000517992 2273 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
TRBV7-9A0A0J9YWB2 TCF24-201ENST00000563496 2450 ntAPPRIS P1 TSL 5 BASIC18.95■□□□□ 0.62
TRBV7-9A0A0J9YWB2 FADD-201ENST00000301838 1841 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
TRBV7-9A0A0J9YWB2 CIB2-201ENST00000258930 1598 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
TRBV7-9A0A0J9YWB2 C11orf80-204ENST00000525908 2135 ntAPPRIS P3 TSL 2 BASIC18.94■□□□□ 0.62
TRBV7-9A0A0J9YWB2 SLC35D2-201ENST00000253270 1613 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
TRBV7-9A0A0J9YWB2 EID2-201ENST00000390658 1629 ntAPPRIS P1 BASIC18.94■□□□□ 0.62
TRBV7-9A0A0J9YWB2 AP002414.2-202ENST00000590929 1450 ntBASIC18.94■□□□□ 0.62
TRBV7-9A0A0J9YWB2 KCNJ4-201ENST00000303592 2065 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
TRBV7-9A0A0J9YWB2 GFRA4-202ENST00000319242 900 ntAPPRIS P4 TSL 1 (best) BASIC18.93■□□□□ 0.62
TRBV7-9A0A0J9YWB2 TXNL4A-210ENST00000591711 669 ntTSL 2 BASIC18.93■□□□□ 0.62
TRBV7-9A0A0J9YWB2 DNPEP-201ENST00000273075 2425 ntAPPRIS P3 TSL 1 (best) BASIC18.93■□□□□ 0.62
TRBV7-9A0A0J9YWB2 FAM220A-201ENST00000313324 2214 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
TRBV7-9A0A0J9YWB2 REXO4-201ENST00000371935 1899 ntTSL 3 BASIC18.92■□□□□ 0.62
TRBV7-9A0A0J9YWB2 MEST-211ENST00000437945 1455 ntTSL 5 BASIC18.92■□□□□ 0.62
TRBV7-9A0A0J9YWB2 KCNC3-201ENST00000376959 5447 ntAPPRIS ALT2 TSL 5 BASIC18.92■□□□□ 0.62
TRBV7-9A0A0J9YWB2 KANSL1L-207ENST00000452086 2334 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
TRBV7-9A0A0J9YWB2 CCDC61-204ENST00000595358 1817 ntAPPRIS P2 TSL 5 BASIC18.92■□□□□ 0.62
TRBV7-9A0A0J9YWB2 PKDCC-201ENST00000294964 2502 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
TRBV7-9A0A0J9YWB2 INAFM1-201ENST00000552360 1255 ntAPPRIS P1 BASIC18.91■□□□□ 0.62
TRBV7-9A0A0J9YWB2 QDPR-201ENST00000281243 1648 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
TRBV7-9A0A0J9YWB2 NKX2-1-204ENST00000522719 1417 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
TRBV7-9A0A0J9YWB2 INPP4A-203ENST00000409463 1565 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
TRBV7-9A0A0J9YWB2 EVC-203ENST00000509451 1960 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
TRBV7-9A0A0J9YWB2 UBE2S-203ENST00000589978 496 ntTSL 5 BASIC18.9■□□□□ 0.62
TRBV7-9A0A0J9YWB2 AC100797.4-201ENST00000631653 1827 ntBASIC18.9■□□□□ 0.62
TRBV7-9A0A0J9YWB2 GABRA5-203ENST00000400081 2761 ntAPPRIS P1 TSL 5 BASIC18.9■□□□□ 0.62
TRBV7-9A0A0J9YWB2 GSR-206ENST00000546342 1482 ntAPPRIS ALT2 TSL 1 (best) BASIC18.9■□□□□ 0.62
TRBV7-9A0A0J9YWB2 CCM2L-201ENST00000262659 2523 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
TRBV7-9A0A0J9YWB2 MKRN1-202ENST00000443720 1601 ntAPPRIS ALT2 TSL 1 (best) BASIC18.89■□□□□ 0.62
TRBV7-9A0A0J9YWB2 KLC2-205ENST00000394078 1557 ntTSL 5 BASIC18.89■□□□□ 0.61
TRBV7-9A0A0J9YWB2 MAZ-205ENST00000562337 1574 ntTSL 3 BASIC18.89■□□□□ 0.61
TRBV7-9A0A0J9YWB2 TERF2-207ENST00000567296 1129 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
TRBV7-9A0A0J9YWB2 UBALD2-203ENST00000589240 660 ntTSL 2 BASIC18.88■□□□□ 0.61
TRBV7-9A0A0J9YWB2 AC005559.1-201ENST00000589661 871 ntBASIC18.88■□□□□ 0.61
TRBV7-9A0A0J9YWB2 TSEN34-203ENST00000396388 1349 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
TRBV7-9A0A0J9YWB2 CREM-210ENST00000374721 2020 ntTSL 5 BASIC18.88■□□□□ 0.61
TRBV7-9A0A0J9YWB2 HDGFL1-201ENST00000510882 2174 ntAPPRIS P1 BASIC18.88■□□□□ 0.61
TRBV7-9A0A0J9YWB2 CCNG2-201ENST00000316355 5526 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
TRBV7-9A0A0J9YWB2 MRAP2-201ENST00000257776 2153 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
TRBV7-9A0A0J9YWB2 RTN2-202ENST00000344680 2063 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
TRBV7-9A0A0J9YWB2 H2AFV-205ENST00000381124 628 ntTSL 3 BASIC18.87■□□□□ 0.61
TRBV7-9A0A0J9YWB2 NAA50-207ENST00000493900 962 ntAPPRIS ALT1 TSL 2 BASIC18.87■□□□□ 0.61
TRBV7-9A0A0J9YWB2 AC108673.1-201ENST00000510422 1159 ntBASIC18.87■□□□□ 0.61
TRBV7-9A0A0J9YWB2 HNRNPLP2-201ENST00000568980 1570 ntBASIC18.87■□□□□ 0.61
TRBV7-9A0A0J9YWB2 PSMG1-201ENST00000331573 2154 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
TRBV7-9A0A0J9YWB2 NR6A1-203ENST00000416460 1898 ntAPPRIS ALT2 TSL 1 (best) BASIC18.86■□□□□ 0.61
TRBV7-9A0A0J9YWB2 PSMG4-202ENST00000380305 489 ntTSL 5 BASIC18.86■□□□□ 0.61
TRBV7-9A0A0J9YWB2 RPUSD1-208ENST00000567114 1835 ntTSL 2 BASIC18.86■□□□□ 0.61
TRBV7-9A0A0J9YWB2 SCCPDH-201ENST00000366510 2503 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
TRBV7-9A0A0J9YWB2 GTF3C4-202ENST00000483873 1417 ntTSL 3 BASIC18.85■□□□□ 0.61
TRBV7-9A0A0J9YWB2 SV2B-203ENST00000545111 2099 ntTSL 2 BASIC18.85■□□□□ 0.61
TRBV7-9A0A0J9YWB2 CCNYL1-203ENST00000392209 1952 ntTSL 2 BASIC18.85■□□□□ 0.61
TRBV7-9A0A0J9YWB2 POLR1D-201ENST00000302979 1166 ntAPPRIS P2 TSL 1 (best) BASIC18.85■□□□□ 0.61
Retrieved 100 of 98,524 protein–RNA pairs in 12.3 ms