Protein–RNA interactions for Protein: P11940

PABPC1, Polyadenylate-binding protein 1, humanhuman

Known RBP Predictions only

Length 636 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PABPC1P11940 PHOSPHO2-208ENST00000617738 1053 ntAPPRIS P1 TSL 2 BASIC20.05■□□□□ 0.8
PABPC1P11940 AC004816.2-201ENST00000622856 284 ntTSL 5 BASIC20.05■□□□□ 0.8
PABPC1P11940 RNF224-201ENST00000445101 1798 ntAPPRIS P1 TSL 3 BASIC20.05■□□□□ 0.8
PABPC1P11940 C17orf67-201ENST00000397861 2013 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
PABPC1P11940 STRADB-201ENST00000194530 2293 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
PABPC1P11940 GOLGA2P11-201ENST00000562660 1621 ntBASIC20.05■□□□□ 0.8
PABPC1P11940 ST7-OT4-201ENST00000397750 1576 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
PABPC1P11940 ATPAF2-206ENST00000474627 1564 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
PABPC1P11940 AP001271.2-201ENST00000624018 1556 ntBASIC20.04■□□□□ 0.8
PABPC1P11940 RELA-201ENST00000308639 2681 ntAPPRIS ALT1 TSL 1 (best) BASIC20.04■□□□□ 0.8
PABPC1P11940 PSMD6-201ENST00000295901 1430 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
PABPC1P11940 TWF2-203ENST00000499914 1440 ntTSL 5 BASIC20.04■□□□□ 0.8
PABPC1P11940 MTFR1L-203ENST00000374303 2004 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
PABPC1P11940 UBAP1-204ENST00000625521 2029 ntTSL 2 BASIC20.04■□□□□ 0.8
PABPC1P11940 B4GALT1-202ENST00000535206 1535 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
PABPC1P11940 DIAPH1-203ENST00000389057 5762 ntAPPRIS ALT2 TSL 5 BASIC20.04■□□□□ 0.8
PABPC1P11940 DNAJC27-AS1-204ENST00000428614 780 ntTSL 3 BASIC20.04■□□□□ 0.8
PABPC1P11940 MIXL1-202ENST00000542034 839 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
PABPC1P11940 AC016582.3-201ENST00000589653 561 ntTSL 4 BASIC20.04■□□□□ 0.8
PABPC1P11940 AC003005.1-201ENST00000601674 582 ntAPPRIS P5 TSL 2 BASIC20.04■□□□□ 0.8
PABPC1P11940 RNF38-204ENST00000357058 5254 ntAPPRIS P1 TSL 5 BASIC20.04■□□□□ 0.8
PABPC1P11940 GPR50-AS1-201ENST00000454196 1620 ntTSL 2 BASIC20.04■□□□□ 0.8
PABPC1P11940 PCDHB12-202ENST00000622978 2093 ntTSL 2 BASIC20.04■□□□□ 0.8
PABPC1P11940 PODNL1-203ENST00000538371 1826 ntAPPRIS ALT2 TSL 2 BASIC20.04■□□□□ 0.8
PABPC1P11940 CBWD3-201ENST00000360171 2165 ntAPPRIS P2 TSL 1 (best) BASIC20.04■□□□□ 0.8
PABPC1P11940 CENPH-206ENST00000515001 1305 ntTSL 2 BASIC20.03■□□□□ 0.8
PABPC1P11940 MTUS2-202ENST00000380808 1793 ntAPPRIS P3 TSL 1 (best) BASIC20.03■□□□□ 0.8
PABPC1P11940 LPAR1-201ENST00000358883 2687 ntAPPRIS P2 TSL 2 BASIC20.03■□□□□ 0.8
PABPC1P11940 RHNO1-204ENST00000489288 1870 ntAPPRIS P3 TSL 1 (best) BASIC20.03■□□□□ 0.8
PABPC1P11940 DNAAF4-201ENST00000321149 1993 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
PABPC1P11940 RPS6KL1-216ENST00000557413 2425 ntAPPRIS P1 TSL 5 BASIC20.03■□□□□ 0.8
PABPC1P11940 C7orf43-201ENST00000316937 2520 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
PABPC1P11940 TMEM179-206ENST00000616017 1645 ntBASIC20.03■□□□□ 0.8
PABPC1P11940 RHOBTB3-201ENST00000379982 5537 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
PABPC1P11940 TMEM223-201ENST00000307366 1288 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
PABPC1P11940 FUOM-203ENST00000368552 762 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
PABPC1P11940 RAMP1-204ENST00000409726 734 ntTSL 3 BASIC20.03■□□□□ 0.8
PABPC1P11940 KRT8P12-201ENST00000468527 998 ntTSL 2 BASIC20.03■□□□□ 0.8
PABPC1P11940 PACRGL-207ENST00000502938 810 ntTSL 4 BASIC20.03■□□□□ 0.8
PABPC1P11940 AC093752.1-201ENST00000511950 605 ntTSL 4 BASIC20.03■□□□□ 0.8
PABPC1P11940 IRF3-222ENST00000599144 1117 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
PABPC1P11940 INTS11-209ENST00000450926 1839 ntTSL 5 BASIC20.03■□□□□ 0.8
PABPC1P11940 ITGBL1-206ENST00000618057 2368 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
PABPC1P11940 SNUPN-205ENST00000564644 1931 ntAPPRIS P1 TSL 2 BASIC20.03■□□□□ 0.8
PABPC1P11940 CCDC71-201ENST00000321895 1781 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
PABPC1P11940 SMARCB1-204ENST00000407422 1643 ntAPPRIS ALT1 TSL 1 (best) BASIC20.02■□□□□ 0.8
PABPC1P11940 ASCL5-201ENST00000449188 2026 ntAPPRIS P1 TSL 3 BASIC20.02■□□□□ 0.8
PABPC1P11940 C1orf50-201ENST00000372525 996 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
PABPC1P11940 HYAL3-203ENST00000415204 959 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
PABPC1P11940 AC211429.1-201ENST00000415277 523 ntBASIC20.02■□□□□ 0.8
PABPC1P11940 ADCYAP1-202ENST00000450565 918 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
PABPC1P11940 BAALC-AS1-207ENST00000522856 594 ntTSL 3 BASIC20.02■□□□□ 0.8
PABPC1P11940 SLC39A13-212ENST00000531974 856 ntTSL 2 BASIC20.02■□□□□ 0.8
PABPC1P11940 SMAGP-204ENST00000603838 816 ntTSL 2 BASIC20.02■□□□□ 0.8
PABPC1P11940 REXO1L10P-201ENST00000615707 1290 ntBASIC20.02■□□□□ 0.8
PABPC1P11940 AL445675.2-201ENST00000620291 557 ntBASIC20.02■□□□□ 0.8
PABPC1P11940 CSF1-203ENST00000369801 1364 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
PABPC1P11940 LHX8-202ENST00000356261 1764 ntAPPRIS ALT2 TSL 1 (best) BASIC20.02■□□□□ 0.8
PABPC1P11940 ARNTL2-204ENST00000395901 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC20.02■□□□□ 0.8
PABPC1P11940 EPN1-201ENST00000085079 2355 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
PABPC1P11940 CLK3-202ENST00000395066 2621 ntTSL 1 (best) BASIC20.02■□□□□ 0.79
PABPC1P11940 PGAP1-204ENST00000409475 2443 ntTSL 2 BASIC20.02■□□□□ 0.79
PABPC1P11940 FBLN5-202ENST00000342058 2123 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.79
PABPC1P11940 GAS2-202ENST00000454584 2286 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
PABPC1P11940 KLHDC4-201ENST00000270583 1886 ntAPPRIS P3 TSL 1 (best) BASIC20.01■□□□□ 0.79
PABPC1P11940 FUZ-201ENST00000313777 1675 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
PABPC1P11940 SETD7-202ENST00000404104 1590 ntTSL 2 BASIC20.01■□□□□ 0.79
PABPC1P11940 CELF6-205ENST00000567083 1496 ntAPPRIS ALT2 TSL 2 BASIC20.01■□□□□ 0.79
PABPC1P11940 GTF3A-201ENST00000381140 1383 ntAPPRIS ALT2 TSL 1 (best) BASIC20.01■□□□□ 0.79
PABPC1P11940 RENBP-202ENST00000393700 1388 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
PABPC1P11940 DYRK3-202ENST00000367108 2218 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
PABPC1P11940 CDKN1B-202ENST00000396340 897 ntTSL 3 BASIC20.01■□□□□ 0.79
PABPC1P11940 ECEL1P3-201ENST00000427961 737 ntBASIC20.01■□□□□ 0.79
PABPC1P11940 CDKN2A-213ENST00000579122 666 ntTSL 3 BASIC20.01■□□□□ 0.79
PABPC1P11940 AL158152.2-201ENST00000602703 235 ntTSL 3 BASIC20.01■□□□□ 0.79
PABPC1P11940 AL590094.1-202ENST00000634619 1131 ntTSL 5 BASIC20.01■□□□□ 0.79
PABPC1P11940 GLT8D1-206ENST00000478968 1826 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
PABPC1P11940 SNAP91-211ENST00000520213 2168 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
PABPC1P11940 MTX1-201ENST00000316721 1441 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
PABPC1P11940 KCTD13-207ENST00000568000 2528 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
PABPC1P11940 CDK13-207ENST00000613626 3099 ntTSL 5 BASIC20.01■□□□□ 0.79
PABPC1P11940 DLGAP4-204ENST00000373913 5056 ntAPPRIS P4 TSL 1 (best) BASIC20.01■□□□□ 0.79
PABPC1P11940 SBK1-201ENST00000341901 4992 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
PABPC1P11940 PYCR3-207ENST00000495276 2332 ntAPPRIS ALT2 TSL 1 (best) BASIC20.01■□□□□ 0.79
PABPC1P11940 SNX3-201ENST00000230085 1755 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
PABPC1P11940 SSBP2-218ENST00000514493 1790 ntTSL 1 (best) BASIC20■□□□□ 0.79
PABPC1P11940 FGF16-201ENST00000439435 1650 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
PABPC1P11940 ROCK2-202ENST00000315872 8292 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
PABPC1P11940 RAB1B-201ENST00000311481 2007 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
PABPC1P11940 WWOX-202ENST00000402655 1594 ntTSL 1 (best) BASIC20■□□□□ 0.79
PABPC1P11940 TPCN2-205ENST00000542467 2000 ntTSL 2 BASIC20■□□□□ 0.79
PABPC1P11940 COCH-201ENST00000216361 2397 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
PABPC1P11940 NUDT11-201ENST00000375992 2385 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
PABPC1P11940 MAP2K2-202ENST00000394867 1471 ntTSL 5 BASIC20■□□□□ 0.79
PABPC1P11940 FEZF1-202ENST00000427185 1368 ntTSL 1 (best) BASIC20■□□□□ 0.79
PABPC1P11940 PRMT5-204ENST00000397441 2418 ntTSL 2 BASIC20■□□□□ 0.79
PABPC1P11940 METTL21A-201ENST00000272839 1210 ntTSL 5 BASIC20■□□□□ 0.79
PABPC1P11940 C7orf50-201ENST00000357429 1294 ntAPPRIS P2 TSL 1 (best) BASIC20■□□□□ 0.79
PABPC1P11940 DAB1-202ENST00000371230 1150 ntTSL 5 BASIC20■□□□□ 0.79
PABPC1P11940 AC087499.1-201ENST00000418141 1075 ntBASIC20■□□□□ 0.79
Retrieved 100 of 98,524 protein–RNA pairs in 69.2 ms