RNA–Protein interactions for RNA: ENST00000307366.7

TMEM223-201, Transcript of transmembrane protein 223, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TMEM223, Length 1,288 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM223-201ENST00000307366 NISCHQ9Y2I1 1504 aa46.88■■■■■ 5.09
TMEM223-201ENST00000307366 CCDC180Q9P1Z9 1646 aa41.52■■■■■ 4.24
TMEM223-201ENST00000307366 ABCC9O60706 1549 aa40.82■■■■■ 4.12
TMEM223-201ENST00000307366 DCAF8L2P0C7V8 631 aa39.38■■■■□ 3.89
TMEM223-201ENST00000307366 RB1CC1Q8TDY2 1594 aa39.16■■■■□ 3.86
TMEM223-201ENST00000307366 NACADO15069 1562 aa39.12■■■■□ 3.85
TMEM223-201ENST00000307366 ZCCHC6Q5VYS8 1495 aaKnown RBP39.02■■■■□ 3.84
TMEM223-201ENST00000307366 MYO15BQ96JP2 1530 aa38.85■■■■□ 3.81
TMEM223-201ENST00000307366 DCAF1Q9Y4B6 1507 aa38.71■■■■□ 3.79
TMEM223-201ENST00000307366 PABPN1Q86U42 306 aaKnown RBP eCLIP38.25■■■■□ 3.71
TMEM223-201ENST00000307366 UNC13AQ9UPW8 1703 aa38.18■■■■□ 3.7
TMEM223-201ENST00000307366 SCRIBQ14160 1630 aa38.02■■■■□ 3.68
TMEM223-201ENST00000307366 BICRAQ9NZM4 1560 aa37.98■■■■□ 3.67
TMEM223-201ENST00000307366 DNAJC5BQ9UF47 199 aa37.54■■■■□ 3.6
TMEM223-201ENST00000307366 SHROOM4Q9ULL8 1493 aa37.51■■■■□ 3.59
TMEM223-201ENST00000307366 EIF4G1Q04637 1599 aaKnown RBP36.99■■■■□ 3.51
TMEM223-201ENST00000307366 CC2D2AQ9P2K1 1620 aa36.85■■■■□ 3.49
TMEM223-201ENST00000307366 CECR2Q9BXF3 1484 aa36.65■■■■□ 3.46
TMEM223-201ENST00000307366 SMARCA4P51532 1647 aa36.32■■■■□ 3.4
TMEM223-201ENST00000307366 BAZ1AQ9NRL2 1556 aaPredicted RBP36.3■■■■□ 3.4
TMEM223-201ENST00000307366 ATAD2BQ9ULI0 1458 aa36.19■■■■□ 3.38
TMEM223-201ENST00000307366 MROH2BQ7Z745 1585 aa36.16■■■■□ 3.38
TMEM223-201ENST00000307366 NCAPD3P42695 1498 aa36.15■■■■□ 3.38
TMEM223-201ENST00000307366 SMARCA2P51531 1590 aa36.08■■■■□ 3.37
TMEM223-201ENST00000307366 PEG3Q9GZU2 1588 aa35.93■■■■□ 3.34
TMEM223-201ENST00000307366 HMGXB3Q12766 1538 aa35.89■■■■□ 3.34
TMEM223-201ENST00000307366 BAZ1BQ9UIG0 1483 aaKnown RBP35.88■■■■□ 3.33
TMEM223-201ENST00000307366 RSF1Q96T23 1441 aaPredicted RBP35.78■■■■□ 3.32
TMEM223-201ENST00000307366 WIZO95785 1651 aa35.73■■■■□ 3.31
TMEM223-201ENST00000307366 TOP2AP11388 1531 aaKnown RBP35.33■■■■□ 3.25
TMEM223-201ENST00000307366 NESP48681 1621 aa35.32■■■■□ 3.24
TMEM223-201ENST00000307366 ERCC6Q03468 1493 aa35.16■■■■□ 3.22
TMEM223-201ENST00000307366 CADPSQ9ULU8 1353 aa35.14■■■■□ 3.22
TMEM223-201ENST00000307366 LAMC3Q9Y6N6 1575 aa35.12■■■■□ 3.21
TMEM223-201ENST00000307366 SUPT5HO00267 1087 aaKnown RBP35.03■■■■□ 3.2
TMEM223-201ENST00000307366 CCDC88BA6NC98 1476 aa35.01■■■■□ 3.19
TMEM223-201ENST00000307366 PDS5BQ9NTI5 1447 aa34.98■■■■□ 3.19
TMEM223-201ENST00000307366 CFTRP13569 1480 aa34.9■■■■□ 3.18
TMEM223-201ENST00000307366 KIF21AQ7Z4S6 1674 aa34.77■■■■□ 3.16
TMEM223-201ENST00000307366 FANCD2Q9BXW9 1451 aa34.71■■■■□ 3.15
TMEM223-201ENST00000307366 CUX2O14529 1486 aa34.71■■■■□ 3.15
TMEM223-201ENST00000307366 THOC2Q8NI27 1593 aaKnown RBP34.66■■■■□ 3.14
TMEM223-201ENST00000307366 CEP164Q9UPV0 1460 aa34.64■■■■□ 3.14
TMEM223-201ENST00000307366 MRC2Q9UBG0 1479 aa34.59■■■■□ 3.13
TMEM223-201ENST00000307366 PRDM2Q13029 1718 aa34.44■■■■□ 3.1
TMEM223-201ENST00000307366 WDR62O43379 1518 aa34.44■■■■□ 3.1
TMEM223-201ENST00000307366 URB2Q14146 1524 aaKnown RBP34.36■■■■□ 3.09
TMEM223-201ENST00000307366 TOPBP1Q92547 1522 aa34.14■■■■□ 3.06
TMEM223-201ENST00000307366 ABCC8Q09428 1581 aa34.11■■■■□ 3.05
TMEM223-201ENST00000307366 DNMBPQ6XZF7 1577 aa34.06■■■■□ 3.04
TMEM223-201ENST00000307366 IFT140Q96RY7 1462 aa33.92■■■■□ 3.02
TMEM223-201ENST00000307366 CUX1P39880 1505 aa33.91■■■■□ 3.02
TMEM223-201ENST00000307366 POLA1P09884 1462 aaPredicted RBP33.86■■■■□ 3.01
TMEM223-201ENST00000307366 ZNF608Q9ULD9 1512 aaPredicted RBP33.82■■■■□ 3
TMEM223-201ENST00000307366 FGD5Q6ZNL6 1462 aa33.79■■■■□ 3
TMEM223-201ENST00000307366 SOGA1O94964 1423 aa33.79■■■■□ 3
TMEM223-201ENST00000307366 RAD54L2Q9Y4B4 1467 aa33.78■■■■□ 3
TMEM223-201ENST00000307366 DNAJC5Q9H3Z4 198 aa33.74■■■□□ 2.99
TMEM223-201ENST00000307366 TARBP1Q13395 1621 aaKnown RBP33.72■■■□□ 2.99
TMEM223-201ENST00000307366 WRNQ14191 1432 aaPredicted RBP eCLIP33.71■■■□□ 2.99
TMEM223-201ENST00000307366 AQRO60306 1485 aaKnown RBP eCLIP33.66■■■□□ 2.98
TMEM223-201ENST00000307366 TDRD9Q8NDG6 1382 aaKnown RBP33.62■■■□□ 2.97
TMEM223-201ENST00000307366 SYNJ1O43426 1573 aa33.6■■■□□ 2.97
TMEM223-201ENST00000307366 EIF4G3O43432 1585 aaKnown RBP33.58■■■□□ 2.97
TMEM223-201ENST00000307366 TOP2BQ02880 1626 aa33.57■■■□□ 2.96
TMEM223-201ENST00000307366 BIVM-ERCC5R4GMW8 1640 aa33.52■■■□□ 2.96
TMEM223-201ENST00000307366 ABCA10Q8WWZ4 1543 aa33.44■■■□□ 2.94
TMEM223-201ENST00000307366 OSCARQ8IYS5 282 aa33.41■■■□□ 2.94
TMEM223-201ENST00000307366 WDR97A6NE52 1622 aa33.39■■■□□ 2.93
TMEM223-201ENST00000307366 GAPVD1Q14C86 1478 aa33.35■■■□□ 2.93
TMEM223-201ENST00000307366 GRIN2BQ13224 1484 aa33.33■■■□□ 2.93
TMEM223-201ENST00000307366 FBLN2P98095 1184 aa33.33■■■□□ 2.93
TMEM223-201ENST00000307366 SNAPC4Q5SXM2 1469 aa33.3■■■□□ 2.92
TMEM223-201ENST00000307366 ABCA5Q8WWZ7 1642 aa33.25■■■□□ 2.91
TMEM223-201ENST00000307366 MAGI1Q96QZ7 1491 aaPredicted RBP33.2■■■□□ 2.91
TMEM223-201ENST00000307366 CHMP7Q8WUX9 453 aaPredicted RBP33.2■■■□□ 2.91
TMEM223-201ENST00000307366 PBRM1Q86U86 1689 aa33.16■■■□□ 2.9
TMEM223-201ENST00000307366 CHD1O14646 1710 aa33.12■■■□□ 2.89
TMEM223-201ENST00000307366 SYNJ2O15056 1496 aa33.1■■■□□ 2.89
TMEM223-201ENST00000307366 TRIM41Q8WV44 630 aa33.05■■■□□ 2.88
TMEM223-201ENST00000307366 ERICH3Q5RHP9 1530 aa33.02■■■□□ 2.88
TMEM223-201ENST00000307366 KIF27Q86VH2 1401 aa33.02■■■□□ 2.88
TMEM223-201ENST00000307366 FHAD1B1AJZ9 1412 aa32.96■■■□□ 2.87
TMEM223-201ENST00000307366 ADAMTS12P58397 1594 aa32.95■■■□□ 2.86
TMEM223-201ENST00000307366 IGF1RP08069 1367 aa32.94■■■□□ 2.86
TMEM223-201ENST00000307366 GRIN2AQ12879 1464 aa32.89■■■□□ 2.86
TMEM223-201ENST00000307366 CLASP1Q7Z460 1538 aa32.81■■■□□ 2.84
TMEM223-201ENST00000307366 RUSC2Q8N2Y8 1516 aa32.78■■■□□ 2.84
TMEM223-201ENST00000307366 ARHGEF11O15085 1522 aa32.77■■■□□ 2.84
TMEM223-201ENST00000307366 RIMBP3CA6NJZ7 1639 aa32.74■■■□□ 2.83
TMEM223-201ENST00000307366 RIMBP3BA6NNM3 1639 aa32.74■■■□□ 2.83
TMEM223-201ENST00000307366 RIMBP3Q9UFD9 1639 aa32.74■■■□□ 2.83
TMEM223-201ENST00000307366 NUP160Q12769 1436 aa32.74■■■□□ 2.83
TMEM223-201ENST00000307366 CARMIL1Q5VZK9 1371 aa32.72■■■□□ 2.83
TMEM223-201ENST00000307366 CEP170Q5SW79 1584 aa32.71■■■□□ 2.83
TMEM223-201ENST00000307366 CUL7Q14999 1698 aa32.67■■■□□ 2.82
TMEM223-201ENST00000307366 CHIC1Q5VXU3 224 aa32.67■■■□□ 2.82
TMEM223-201ENST00000307366 CYB5RLQ6IPT4 315 aa32.6■■■□□ 2.81
TMEM223-201ENST00000307366 JPH4Q96JJ6 628 aa32.52■■■□□ 2.8
TMEM223-201ENST00000307366 ARAP1Q96P48 1450 aa32.52■■■□□ 2.8
Retrieved 100 of 20,778 RNA–protein pairs in 54.8 ms