Protein–RNA interactions for Protein: S4R434

TMEM56-RWDD3, TMEM56-RWDD3 readthrough, humanhuman

Predictions only

Length 201 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM56-RWDD3S4R434 DOK4-218ENST00000569548 1848 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
TMEM56-RWDD3S4R434 EFS-201ENST00000216733 3118 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
TMEM56-RWDD3S4R434 ADGRD2-201ENST00000334810 3244 ntAPPRIS P1 TSL 5 BASIC16.07■□□□□ 0.16
TMEM56-RWDD3S4R434 MARK2-203ENST00000377810 4560 ntAPPRIS ALT2 TSL 5 BASIC16.07■□□□□ 0.16
TMEM56-RWDD3S4R434 KANSL1-202ENST00000432791 5343 ntAPPRIS P3 TSL 1 (best) BASIC16.07■□□□□ 0.16
TMEM56-RWDD3S4R434 MAPK9-201ENST00000343111 4369 ntTSL 5 BASIC16.07■□□□□ 0.16
TMEM56-RWDD3S4R434 LTBP4-201ENST00000204005 5032 ntAPPRIS ALT2 TSL 1 (best) BASIC16.07■□□□□ 0.16
TMEM56-RWDD3S4R434 AK1-201ENST00000223836 736 ntTSL 3 BASIC16.07■□□□□ 0.16
TMEM56-RWDD3S4R434 FBXO33-202ENST00000554190 534 ntTSL 3 BASIC16.07■□□□□ 0.16
TMEM56-RWDD3S4R434 AC018521.5-202ENST00000577279 374 ntTSL 3 BASIC16.07■□□□□ 0.16
TMEM56-RWDD3S4R434 AC018521.5-201ENST00000582787 496 ntTSL 2 BASIC16.07■□□□□ 0.16
TMEM56-RWDD3S4R434 ZNF771-202ENST00000434417 1454 ntAPPRIS P1 TSL 2 BASIC16.07■□□□□ 0.16
TMEM56-RWDD3S4R434 AC079598.2-202ENST00000546624 1451 ntBASIC16.07■□□□□ 0.16
TMEM56-RWDD3S4R434 RPUSD2-202ENST00000559271 1558 ntAPPRIS ALT2 TSL 2 BASIC16.07■□□□□ 0.16
TMEM56-RWDD3S4R434 MFSD10-211ENST00000514800 1776 ntTSL 5 BASIC16.07■□□□□ 0.16
TMEM56-RWDD3S4R434 DSCC1-201ENST00000313655 2314 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
TMEM56-RWDD3S4R434 ZNF419-205ENST00000424930 2323 ntAPPRIS ALT2 TSL 1 (best) BASIC16.07■□□□□ 0.16
TMEM56-RWDD3S4R434 PPP1R3F-202ENST00000376188 2443 ntTSL 2 BASIC16.07■□□□□ 0.16
TMEM56-RWDD3S4R434 CDK11A-205ENST00000378633 2458 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
TMEM56-RWDD3S4R434 SYBU-232ENST00000533171 2498 ntAPPRIS ALT2 TSL 2 BASIC16.07■□□□□ 0.16
TMEM56-RWDD3S4R434 CHPF-203ENST00000535926 2634 ntTSL 2 BASIC16.07■□□□□ 0.16
TMEM56-RWDD3S4R434 ERLIN1-203ENST00000421367 5792 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
TMEM56-RWDD3S4R434 NPTX1-201ENST00000306773 5122 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
TMEM56-RWDD3S4R434 RFTN1-201ENST00000334133 2982 ntAPPRIS P2 TSL 1 (best) BASIC16.06■□□□□ 0.16
TMEM56-RWDD3S4R434 PHLDB3-201ENST00000292140 2591 ntAPPRIS P1 TSL 5 BASIC16.06■□□□□ 0.16
TMEM56-RWDD3S4R434 KLHL17-201ENST00000338591 2560 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
TMEM56-RWDD3S4R434 SMPD1-201ENST00000342245 2452 ntAPPRIS ALT1 TSL 1 (best) BASIC16.06■□□□□ 0.16
TMEM56-RWDD3S4R434 TTLL10-203ENST00000379290 2283 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
TMEM56-RWDD3S4R434 FAM213A-206ENST00000615554 2213 ntAPPRIS P1 TSL 5 BASIC16.06■□□□□ 0.16
TMEM56-RWDD3S4R434 GGT6-202ENST00000381550 2145 ntTSL 2 BASIC16.06■□□□□ 0.16
TMEM56-RWDD3S4R434 PEX5L-206ENST00000465751 2147 ntAPPRIS ALT2 TSL 2 BASIC16.06■□□□□ 0.16
TMEM56-RWDD3S4R434 TMEM70-201ENST00000312184 2018 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
TMEM56-RWDD3S4R434 IMP3-201ENST00000314852 2028 ntAPPRIS P1 TSL 2 BASIC16.06■□□□□ 0.16
TMEM56-RWDD3S4R434 LRCH3-207ENST00000441090 2034 ntTSL 2 BASIC16.06■□□□□ 0.16
TMEM56-RWDD3S4R434 CYP2E1-205ENST00000463117 1912 ntAPPRIS P1 TSL 5 BASIC16.06■□□□□ 0.16
TMEM56-RWDD3S4R434 SLC25A20-201ENST00000319017 1879 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
TMEM56-RWDD3S4R434 SLC36A1-209ENST00000521925 1621 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
TMEM56-RWDD3S4R434 B4GALNT1-213ENST00000552350 1649 ntTSL 4 BASIC16.06■□□□□ 0.16
TMEM56-RWDD3S4R434 CORO1A-216ENST00000570045 1622 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
TMEM56-RWDD3S4R434 GMPPA-201ENST00000313597 1544 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
TMEM56-RWDD3S4R434 TALDO1-201ENST00000319006 1346 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
TMEM56-RWDD3S4R434 HLA-G-202ENST00000376815 851 ntBASIC16.06■□□□□ 0.16
TMEM56-RWDD3S4R434 HLA-G-203ENST00000376818 1127 ntBASIC16.06■□□□□ 0.16
TMEM56-RWDD3S4R434 DHRS4-202ENST00000397074 785 ntTSL 5 BASIC16.06■□□□□ 0.16
TMEM56-RWDD3S4R434 STOX2-205ENST00000513034 807 ntTSL 3 BASIC16.06■□□□□ 0.16
TMEM56-RWDD3S4R434 AL162412.1-201ENST00000567129 965 ntBASIC16.06■□□□□ 0.16
TMEM56-RWDD3S4R434 FAM91A1-201ENST00000334705 5511 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
TMEM56-RWDD3S4R434 PCCA-203ENST00000376286 2481 ntTSL 2 BASIC16.06■□□□□ 0.16
TMEM56-RWDD3S4R434 AC005082.1-201ENST00000413042 2259 ntBASIC16.06■□□□□ 0.16
TMEM56-RWDD3S4R434 DENND1A-203ENST00000373624 5010 ntAPPRIS P4 TSL 5 BASIC16.06■□□□□ 0.16
TMEM56-RWDD3S4R434 NFATC1-201ENST00000253506 4642 ntAPPRIS P3 TSL 1 (best) BASIC16.06■□□□□ 0.16
TMEM56-RWDD3S4R434 CHST2-201ENST00000309575 4582 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
TMEM56-RWDD3S4R434 EEF1A1-203ENST00000331523 1923 ntAPPRIS P1 TSL 5 BASIC16.06■□□□□ 0.16
TMEM56-RWDD3S4R434 PDLIM2-204ENST00000397760 1847 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
TMEM56-RWDD3S4R434 ARHGAP8-204ENST00000389774 1725 ntAPPRIS ALT2 TSL 2 BASIC16.05■□□□□ 0.16
TMEM56-RWDD3S4R434 ADAMTS9-202ENST00000459780 2871 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
TMEM56-RWDD3S4R434 LMAN1L-202ENST00000379709 1699 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
TMEM56-RWDD3S4R434 ENTPD6-202ENST00000360031 2766 ntAPPRIS ALT2 TSL 1 (best) BASIC16.05■□□□□ 0.16
TMEM56-RWDD3S4R434 PLAGL1-207ENST00000417959 1645 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
TMEM56-RWDD3S4R434 GAS2L1P2-201ENST00000436355 1356 ntBASIC16.05■□□□□ 0.16
TMEM56-RWDD3S4R434 SPHK2-213ENST00000601712 1394 ntAPPRIS ALT2 TSL 5 BASIC16.05■□□□□ 0.16
TMEM56-RWDD3S4R434 HLX-201ENST00000366903 2280 ntAPPRIS P2 TSL 1 (best) BASIC16.05■□□□□ 0.16
TMEM56-RWDD3S4R434 SUN1-220ENST00000457378 1309 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
TMEM56-RWDD3S4R434 MOXD1-203ENST00000392401 2191 ntTSL 4 BASIC16.05■□□□□ 0.16
TMEM56-RWDD3S4R434 AL161938.1-201ENST00000569833 2180 ntBASIC16.05■□□□□ 0.16
TMEM56-RWDD3S4R434 PRSS3-202ENST00000361005 966 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
TMEM56-RWDD3S4R434 NALT1-201ENST00000429224 738 ntTSL 5 BASIC16.05■□□□□ 0.16
TMEM56-RWDD3S4R434 AC142381.2-201ENST00000566120 298 ntBASIC16.05■□□□□ 0.16
TMEM56-RWDD3S4R434 AC016888.1-201ENST00000585285 565 ntTSL 3 BASIC16.05■□□□□ 0.16
TMEM56-RWDD3S4R434 LINC01901-201ENST00000585822 1115 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
TMEM56-RWDD3S4R434 AL138963.3-201ENST00000610057 588 ntTSL 4 BASIC16.05■□□□□ 0.16
TMEM56-RWDD3S4R434 KLHL23-201ENST00000272797 2087 ntAPPRIS P1 TSL 2 BASIC16.05■□□□□ 0.16
TMEM56-RWDD3S4R434 CDC42EP2-201ENST00000279249 2023 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
TMEM56-RWDD3S4R434 FAM57A-201ENST00000301324 2013 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
TMEM56-RWDD3S4R434 AGAP4-201ENST00000311652 2715 ntAPPRIS ALT2 TSL 1 (best) BASIC16.05■□□□□ 0.16
TMEM56-RWDD3S4R434 FAM117B-201ENST00000392238 5763 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
TMEM56-RWDD3S4R434 PHF12-202ENST00000332830 4759 ntAPPRIS P1 TSL 2 BASIC16.05■□□□□ 0.16
TMEM56-RWDD3S4R434 CCDC71-201ENST00000321895 1781 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
TMEM56-RWDD3S4R434 SLC22A17-204ENST00000397267 2455 ntAPPRIS P4 TSL 5 BASIC16.05■□□□□ 0.16
TMEM56-RWDD3S4R434 MAFF-206ENST00000538320 2458 ntAPPRIS P1 TSL 4 BASIC16.05■□□□□ 0.16
TMEM56-RWDD3S4R434 ERLIN2-202ENST00000335171 1742 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
TMEM56-RWDD3S4R434 LRRC4B-202ENST00000599957 3019 ntAPPRIS P1 TSL 3 BASIC16.05■□□□□ 0.16
TMEM56-RWDD3S4R434 FLCN-203ENST00000389169 1692 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
TMEM56-RWDD3S4R434 SNRPA-201ENST00000243563 1621 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
TMEM56-RWDD3S4R434 WDR45-207ENST00000376372 1639 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
TMEM56-RWDD3S4R434 FGFR1-203ENST00000341462 6054 ntTSL 5 BASIC16.05■□□□□ 0.16
TMEM56-RWDD3S4R434 SH3BP1-201ENST00000357436 2852 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
TMEM56-RWDD3S4R434 SSC4D-201ENST00000275560 2801 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
TMEM56-RWDD3S4R434 CDC123-201ENST00000281141 1542 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
TMEM56-RWDD3S4R434 MARC2-202ENST00000366913 2134 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
TMEM56-RWDD3S4R434 CEP85L-205ENST00000419517 2079 ntAPPRIS P3 TSL 1 (best) BASIC16.04■□□□□ 0.16
TMEM56-RWDD3S4R434 ZNF623-203ENST00000526926 2612 ntAPPRIS ALT2 TSL 2 BASIC16.04■□□□□ 0.16
TMEM56-RWDD3S4R434 SLC23A3-201ENST00000295738 2037 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
TMEM56-RWDD3S4R434 GALNT10-201ENST00000297107 5961 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
TMEM56-RWDD3S4R434 FOXI1-201ENST00000306268 1990 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
TMEM56-RWDD3S4R434 SPAST-203ENST00000615843 5212 ntAPPRIS P4 TSL 1 (best) BASIC16.04■□□□□ 0.16
TMEM56-RWDD3S4R434 TMEM255B-202ENST00000375353 6100 ntAPPRIS P2 TSL 1 (best) BASIC16.04■□□□□ 0.16
TMEM56-RWDD3S4R434 SHISA5-220ENST00000619810 2385 ntTSL 2 BASIC16.04■□□□□ 0.16
TMEM56-RWDD3S4R434 FAM90A1-201ENST00000307435 2342 ntAPPRIS P1 TSL 2 BASIC16.04■□□□□ 0.16
TMEM56-RWDD3S4R434 MRPL37-201ENST00000336230 1179 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
Retrieved 100 of 98,524 protein–RNA pairs in 86.3 ms